RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PRDX5P30044 214 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ELF1P32519 619 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 TOB2Q14106 344 aaPredicted RBP14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 CYFIP1Q7L576 1253 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 RNF135Q8IUD6 432 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SAAL1Q96ER3 474 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 VPS11Q9H270 941 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 TXLNGQ9NUQ3 528 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 CNOT8Q9UFF9 292 aaKnown RBP14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 CAPN11Q9UMQ6 739 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 NPHP3-ACAD11A0A0J9YXS1 232 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 POTEB3A0JP26 581 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 POTECB2RU33 542 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 TADA3O75528 432 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 IFNAR1P17181 557 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ERFP50548 548 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 NOP14P78316 857 aaKnown RBP14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PDCD2Q16342 344 aaPredicted RBP14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 POTEBQ6S5H4 581 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 RHPN2Q8IUC4 686 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PPARGC1AQ9UBK2 798 aaKnown RBP14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 EEF1DP29692 281 aaKnown RBP14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PRCPP42785 496 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 CRKP46108 304 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ATG16L1Q676U5 607 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ADAM33Q9BZ11 813 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SUFUQ9UMX1 484 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 RNF123Q5XPI4 1314 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 GOLGA8QA0A0J9YX86 632 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 GOLGA8OA6NCC3 632 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 GOLGA8NF8WBI6 632 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 MMEP08473 750 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ADORA2BP29275 332 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 GRAPQ13588 217 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ARL13BQ3SXY8 428 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 NFRKBQ6P4R8 1299 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 GRAPLQ8TC17 118 aaPredicted RBP14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SLC10A4Q96EP9 437 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PANX2Q96RD6 677 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 TTC1Q99614 292 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 HNRNPCL2B2RXH8 293 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 HNRNPCL1O60812 293 aaKnown RBP14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SPAG7O75391 227 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 GUCY2CP25092 1073 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 DMTNQ08495 405 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 KLC3Q6P597 504 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SMIM5Q71RC9 77 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 RASSF3Q86WH2 238 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 AFG1LQ8WV93 481 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 FSD1LQ9BXM9 530 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 LRRC14Q15048 493 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 DALRD3Q5D0E6 543 aaKnown RBP14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 EPHA10Q5JZY3 1008 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 RGS9BPQ6ZS82 235 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 EDEM3Q9BZQ6 932 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ZCWPW1Q9H0M4 648 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 KLHL11Q9NVR0 708 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ADAM22Q9P0K1 906 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PEG3Q9GZU2 1588 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 POTEFA5A3E0 1075 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 POTEIP0CG38 1075 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PSMD2Q13200 908 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 DRP2Q13474 957 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 C1orf228Q6PIY5 440 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 POTEGQ6S5H5 508 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 POTEEQ6S8J3 1075 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SNX19Q92543 992 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 N4BP2L2Q92802 583 aaPredicted RBP14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 GCNAQ96QF7 691 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 C11orf70Q9BRQ4 267 aa14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 MMTAG2Q9BU76 263 aaKnown RBP14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 TRPC5Q9UL62 973 aaPredicted RBP14.53□□□□□ -0.08
CHRFAM7A-201ENST00000299847 POU5F1BQ06416 359 aa14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 AP1B1Q10567 949 aa14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ZNF699Q32M78 642 aa14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 DCAF4L1Q3SXM0 396 aa14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ZBED2Q9BTP6 218 aa14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 M0QYV0 167 aa14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 BBOX1O75936 387 aa14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 GGCXP38435 758 aa14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ARMCX2Q7L311 632 aa14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 EFCAB13Q8IY85 973 aa14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 RNF168Q8IYW5 571 aaPredicted RBP14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 IFT43Q96FT9 208 aa14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 CEP19Q96LK0 163 aa14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 NUP85Q9BW27 656 aa14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 DCTN4Q9UJW0 460 aa14.52□□□□□ -0.08
CHRFAM7A-201ENST00000299847 COPEO14579 308 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TTI1O43156 1089 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 MOCS2O96007 188 aaPredicted RBP14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ATICP31939 592 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ZNF568Q3ZCX4 644 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CIAPIN1Q6FI81 312 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PITPNM3Q9BZ71 974 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ABHD10Q9NUJ1 306 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 HEG1Q9ULI3 1381 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TJP3O95049 919 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 IREB2P48200 963 aaKnown RBP14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ARHGDIAP52565 204 aa14.52□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CRLF3Q8IUI8 442 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms