RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 SEMA3EO15041 775 aa15.32■□□□□ 0.04
SPRED1-201ENST00000299084 GADD45BO75293 160 aaPredicted RBP15.32■□□□□ 0.04
SPRED1-201ENST00000299084 SF3B3Q15393 1217 aaKnown RBP15.32■□□□□ 0.04
SPRED1-201ENST00000299084 FLCNQ8NFG4 579 aa15.32■□□□□ 0.04
SPRED1-201ENST00000299084 ZWILCHQ9H900 591 aa15.32■□□□□ 0.04
SPRED1-201ENST00000299084 XDHP47989 1333 aa15.32■□□□□ 0.04
SPRED1-201ENST00000299084 PLS3P13797 630 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 CYP27A1Q02318 531 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 CCDC92Q53HC0 331 aaPredicted RBP15.31■□□□□ 0.04
SPRED1-201ENST00000299084 CIAPIN1Q6FI81 312 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 PRAMEP78395 509 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 CATSPER3Q86XQ3 398 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 HIPK4Q8NE63 616 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 PJA2O43164 708 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 A1BGP04217 495 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 PCIF1Q9H4Z3 704 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 ZNF229Q9UJW7 825 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 PRG3Q9Y2Y8 225 aaPredicted RBP15.31■□□□□ 0.04
SPRED1-201ENST00000299084 ZMYM3Q14202 1370 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 RALBP11234 206 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 DTNAQ9Y4J8 743 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 GOLGA8HP0CJ92 632 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 FBLN1P23142 703 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 DEPDC1Q5TB30 811 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 ASZ1Q8WWH4 475 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 STMN3Q9NZ72 180 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 SLC25A13Q9UJS0 675 aa15.31■□□□□ 0.04
SPRED1-201ENST00000299084 WDR91A4D1P6 747 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 GRIK1P39086 918 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 RASGRF1Q13972 1273 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 RMDN1Q96DB5 314 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 AKT1P31749 480 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 ZAP70P43403 619 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 ARHGEF7Q14155 803 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 TSC22D1Q15714 1073 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 KCTD16Q68DU8 428 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 PYROXD1Q8WU10 500 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 USP17L3A6NCW0 530 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 USP17L4A6NCW7 530 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 CCT5P48643 541 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 KRT17Q04695 432 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 ADCK5Q3MIX3 580 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 MIGA2Q7L4E1 593 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 USP17L1Q7RTZ2 530 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 TMC4Q7Z404 712 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 ERICH1Q86X53 443 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 C10orf53Q8N6V4 93 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 ZNF713Q8N859 430 aaPredicted RBP15.3■□□□□ 0.04
SPRED1-201ENST00000299084 ENAHQ8N8S7 591 aaPredicted RBP15.3■□□□□ 0.04
SPRED1-201ENST00000299084 MMP19Q99542 508 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 FAM32AQ9Y421 112 aaKnown RBP15.3■□□□□ 0.04
SPRED1-201ENST00000299084 RNF123Q5XPI4 1314 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 TCP11X2Q5H9J9 407 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 MRPL50Q8N5N7 158 aaKnown RBP15.3■□□□□ 0.04
SPRED1-201ENST00000299084 INTS4Q96HW7 963 aaKnown RBP15.3■□□□□ 0.04
SPRED1-201ENST00000299084 UBE2TQ9NPD8 197 aaPredicted RBP15.3■□□□□ 0.04
SPRED1-201ENST00000299084 NGRNQ9NPE2 291 aaKnown RBP15.3■□□□□ 0.04
SPRED1-201ENST00000299084 KDM5BQ9UGL1 1544 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 PNOCQ13519 176 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 EFTUD2Q15029 972 aaKnown RBP eCLIP15.3■□□□□ 0.04
SPRED1-201ENST00000299084 SNX30Q5VWJ9 437 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 UNC45AQ9H3U1 944 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 DBNDD1Q9H9R9 158 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 NEUROD4Q9HD90 331 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 TADA2AO75478 443 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 IGHDP01880 384 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 BMP3P12645 472 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 CSE1LP55060 971 aaKnown RBP15.3■□□□□ 0.04
SPRED1-201ENST00000299084 SPDYAQ5MJ70 313 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 DYDC2Q96IM9 177 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 SLC52A2Q9HAB3 445 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 DDX56Q9NY93 547 aaKnown RBP15.3■□□□□ 0.04
SPRED1-201ENST00000299084 SH3BP1Q9Y3L3 701 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 SDR42E1Q8WUS8 393 aa15.3■□□□□ 0.04
SPRED1-201ENST00000299084 ZNF804BA4D1E1 1349 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 TRAPPC3O43617 180 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 LDHAP00338 332 aaKnown RBP15.29■□□□□ 0.04
SPRED1-201ENST00000299084 AFPP02771 609 aaKnown RBP15.29■□□□□ 0.04
SPRED1-201ENST00000299084 ZNF235Q14590 738 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 ARHGAP15Q53QZ3 475 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 ENGASEQ8NFI3 743 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 TJP3O95049 919 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 RPN1P04843 607 aaKnown RBP15.29■□□□□ 0.04
SPRED1-201ENST00000299084 ATP6V1C1P21283 382 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 POU5F1BQ06416 359 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 TTLL4Q14679 1199 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 SYDE2Q5VT97 1194 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 LVRNQ6Q4G3 990 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 TOGARAM2Q6ZUX3 1019 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 GPKOWQ92917 476 aaPredicted RBP eCLIP15.29■□□□□ 0.04
SPRED1-201ENST00000299084 ZNF556Q9HAH1 456 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 CNOT7Q9UIV1 285 aaKnown RBP15.29■□□□□ 0.04
SPRED1-201ENST00000299084 CAB39Q9Y376 341 aaPredicted RBP15.29■□□□□ 0.04
SPRED1-201ENST00000299084 BLMP54132 1417 aaPredicted RBP15.29■□□□□ 0.04
SPRED1-201ENST00000299084 COPS2P61201 443 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 CEP78Q5JTW2 689 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 PLEKHA8Q96JA3 519 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 SERTAD1Q9UHV2 236 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 PCDHGA4Q9Y5G9 962 aa15.29■□□□□ 0.04
SPRED1-201ENST00000299084 GOLGA8MH3BSY2 632 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms