RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 NUP58Q9BVL2 599 aa28.2■■■□□ 2.1
SDCCAG3-201ENST00000298537 STAM2O75886 525 aa28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 PLEKP08567 350 aaPredicted RBP28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 ATP4AP20648 1035 aa28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 UBA1P22314 1058 aaKnown RBP28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 ZBED6P86452 979 aa28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 SMAP1Q8IYB5 467 aaPredicted RBP28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 EFCC1Q9HA90 598 aa28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 DNAI1Q9UI46 699 aa28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 REXO2Q9Y3B8 237 aaKnown RBP28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 LOXHD1Q8IVV2 1947 aa28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 SOCS7O14512 581 aa28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 NOL4O94818 638 aa28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 CCDC175P0C221 793 aa28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 OSBPP22059 807 aa28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 PEX3P56589 373 aa28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 PRKCEQ02156 737 aa28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 DCAF17Q5H9S7 520 aaPredicted RBP28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 CEP170P1Q96L14 293 aa28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 AGPAT3Q9NRZ7 376 aa28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 ARMCX3Q9UH62 379 aaPredicted RBP28.19■■■□□ 2.1
SDCCAG3-201ENST00000298537 PSAPP07602 524 aa28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 PLS3P13797 630 aa28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 ICAM3P32942 547 aa28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 CYP2J2P51589 502 aa28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 TMEM63BQ5T3F8 832 aa28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 RETREG2Q8NC44 543 aa28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 RDM1Q8NG50 284 aa28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 BSNDQ8WZ55 320 aa28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 SLC16A4O15374 487 aa28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 FIGNQ5HY92 759 aa28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 MS4A4AQ96JQ5 239 aa28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 WDR24Q96S15 920 aa28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 NLRC4Q9NPP4 1024 aa28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 ANKEF1Q9NU02 776 aa28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 LARSQ9P2J5 1176 aaKnown RBP28.18■■■□□ 2.1
SDCCAG3-201ENST00000298537 SYNGAP1Q96PV0 1343 aa28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 ARIH2O95376 493 aa28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 ETF1P62495 437 aaKnown RBP28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 MEA1Q16626 185 aa28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 LY6KQ17RY6 165 aa28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 ZSWIM2Q8NEG5 633 aa28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 BAP1Q92560 729 aa28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 LSM14BQ9BX40 385 aaKnown RBP28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 SEPT9Q9UHD8 586 aaPredicted RBP28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 CCP110O43303 1012 aa28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 SUPT20HL2P0C7V6 817 aa28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 TERF1P54274 439 aa28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 ERVK-9P63128 1117 aa28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 FRMD5Q7Z6J6 570 aa28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 GBP3Q9H0R5 595 aa28.17■■■□□ 2.1
SDCCAG3-201ENST00000298537 ACTN1P12814 892 aa28.16■■■□□ 2.1
SDCCAG3-201ENST00000298537 ATP6V0A1Q93050 837 aa28.16■■■□□ 2.1
SDCCAG3-201ENST00000298537 BORCS6Q96GS4 357 aa28.16■■■□□ 2.1
SDCCAG3-201ENST00000298537 A0A1W2PQJ5 194 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 LRRC53A6NM62 1247 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 SLC25A27O95847 323 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 TCERG1LQ5VWI1 586 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 RRAGAQ7L523 313 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 RDH13Q8NBN7 331 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 KIF18AQ8NI77 898 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 MMP19Q99542 508 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 MAF1Q9H063 256 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 PCIF1Q9H4Z3 704 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 EPN1Q9Y6I3 576 aaPredicted RBP28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 BTBD19C9JJ37 291 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 NDUFA10O95299 355 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 SYCP3Q8IZU3 236 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 SLC35C1Q96A29 364 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 XPNPEP1Q9NQW7 623 aa28.15■■■□□ 2.1
SDCCAG3-201ENST00000298537 PDHXO00330 501 aa28.14■■■□□ 2.1
SDCCAG3-201ENST00000298537 FARP2O94887 1054 aaPredicted RBP28.14■■■□□ 2.1
SDCCAG3-201ENST00000298537 SLC9A1P19634 815 aa28.14■■■□□ 2.1
SDCCAG3-201ENST00000298537 RPL13P26373 211 aaKnown RBP28.14■■■□□ 2.1
SDCCAG3-201ENST00000298537 HAUS6Q7Z4H7 955 aa28.14■■■□□ 2.1
SDCCAG3-201ENST00000298537 NEK11Q8NG66 645 aa28.14■■■□□ 2.1
SDCCAG3-201ENST00000298537 BRI3BPQ8WY22 251 aa28.14■■■□□ 2.1
SDCCAG3-201ENST00000298537 PAXBP1Q9Y5B6 917 aa28.14■■■□□ 2.1
SDCCAG3-201ENST00000298537 MTERF2Q49AM1 385 aa28.14■■■□□ 2.09
SDCCAG3-201ENST00000298537 MIS18BP1Q6P0N0 1132 aa28.14■■■□□ 2.09
SDCCAG3-201ENST00000298537 ANKRD13CQ8N6S4 541 aa28.14■■■□□ 2.09
SDCCAG3-201ENST00000298537 PCYT2Q99447 389 aa28.14■■■□□ 2.09
SDCCAG3-201ENST00000298537 TRIM10Q9UDY6 481 aa28.14■■■□□ 2.09
SDCCAG3-201ENST00000298537 DNAJC25-GNG10A0A024R161 153 aa28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 GSTTP1A0A1W2PQM5 241 aa28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 EPB41P11171 864 aaKnown RBP28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 FBXO16Q8IX29 292 aaPredicted RBP28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 NHEJ1Q9H9Q4 299 aaPredicted RBP28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 DMAC2Q9NW81 257 aa28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 IGSF9BQ9UPX0 1349 aa28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 MCM3APO60318 1980 aa28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 CCL15-CCL14A0A0B4J2E2 113 aa28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 CELF2O95319 508 aaKnown RBP28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 XRCC5P13010 732 aaKnown RBP28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 GNG11P61952 73 aa28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 KCTD2Q14681 263 aa28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 CCL15Q16663 113 aa28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 HS2ST1Q7LGA3 356 aa28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 FAM186BQ8IYM0 893 aa28.13■■■□□ 2.09
SDCCAG3-201ENST00000298537 CBWD1Q9BRT8 395 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms