RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 YWHABP31946 246 aaKnown RBP13.51□□□□□ -0.25
HMGB2-201ENST00000296503 DNM2P50570 870 aa13.51□□□□□ -0.25
HMGB2-201ENST00000296503 NPEPPSP55786 919 aa13.51□□□□□ -0.25
HMGB2-201ENST00000296503 LPIN1Q14693 890 aa13.51□□□□□ -0.25
HMGB2-201ENST00000296503 FBXO47Q5MNV8 452 aa13.51□□□□□ -0.25
HMGB2-201ENST00000296503 PLA2G4FQ68DD2 849 aa13.51□□□□□ -0.25
HMGB2-201ENST00000296503 FERMT3Q86UX7 667 aa13.51□□□□□ -0.25
HMGB2-201ENST00000296503 C4orf32Q8N8J7 132 aa13.51□□□□□ -0.25
HMGB2-201ENST00000296503 PHOSPHO2Q8TCD6 241 aa13.51□□□□□ -0.25
HMGB2-201ENST00000296503 CEP170P1Q96L14 293 aa13.51□□□□□ -0.25
HMGB2-201ENST00000296503 GBP4Q96PP9 640 aa13.51□□□□□ -0.25
HMGB2-201ENST00000296503 SLC9A7Q96T83 725 aa13.51□□□□□ -0.25
HMGB2-201ENST00000296503 HSD17B14Q9BPX1 270 aa13.51□□□□□ -0.25
HMGB2-201ENST00000296503 CYP26B1Q9NR63 512 aa13.51□□□□□ -0.25
HMGB2-201ENST00000296503 ZBTB39O15060 712 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 SYT1P21579 422 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 PBX2P40425 430 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 RABGGTBP53611 331 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 WDR5P61964 334 aaKnown RBP13.5□□□□□ -0.25
HMGB2-201ENST00000296503 CCDC173Q0VFZ6 552 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 KIZQ2M2Z5 673 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 XKR9Q5GH70 373 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 DEFB123Q8N688 67 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 USP38Q8NB14 1042 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 ERMNQ8TAM6 284 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 NEK9Q8TD19 979 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 APBB2Q92870 758 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 TRIM44Q96DX7 344 aaPredicted RBP13.5□□□□□ -0.25
HMGB2-201ENST00000296503 ZBED2Q9BTP6 218 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 PBX4Q9BYU1 374 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 CDHR5Q9HBB8 845 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.5□□□□□ -0.25
HMGB2-201ENST00000296503 LAD1O00515 517 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 MAFO75444 373 aaPredicted RBP13.5□□□□□ -0.25
HMGB2-201ENST00000296503 DNAJB2P25686 324 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 CD52P31358 61 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 NLRP11P59045 1033 aaKnown RBP13.5□□□□□ -0.25
HMGB2-201ENST00000296503 RAB30Q15771 203 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 ZNF697Q5TEC3 545 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 TSHZ1Q6ZSZ6 1077 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 Q7L0L9 218 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 BRAPQ7Z569 592 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 EXOC8Q8IYI6 725 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 ZNF579Q8NAF0 562 aaKnown RBP13.5□□□□□ -0.25
HMGB2-201ENST00000296503 CCDC43Q96MW1 224 aaKnown RBP13.5□□□□□ -0.25
HMGB2-201ENST00000296503 FAM161BQ96MY7 647 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 JPH2Q9BR39 696 aaPredicted RBP13.5□□□□□ -0.25
HMGB2-201ENST00000296503 RAB34Q9BZG1 259 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 LRWD1Q9UFC0 647 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 SQORQ9Y6N5 450 aa13.5□□□□□ -0.25
HMGB2-201ENST00000296503 KDM3AQ9Y4C1 1321 aa13.49□□□□□ -0.25
HMGB2-201ENST00000296503 A0A087WWV3 80 aa13.49□□□□□ -0.25
HMGB2-201ENST00000296503 RPS6KA5O75582 802 aa13.49□□□□□ -0.25
HMGB2-201ENST00000296503 AMHP03971 560 aa13.49□□□□□ -0.25
HMGB2-201ENST00000296503 POLGP54098 1239 aaPredicted RBP13.49□□□□□ -0.25
HMGB2-201ENST00000296503 DEFB103AP81534 67 aa13.49□□□□□ -0.25
HMGB2-201ENST00000296503 NFX1Q12986 1120 aaKnown RBP13.49□□□□□ -0.25
HMGB2-201ENST00000296503 PDIA5Q14554 519 aa13.49□□□□□ -0.25
HMGB2-201ENST00000296503 FAM117BQ6P1L5 589 aa13.49□□□□□ -0.25
HMGB2-201ENST00000296503 DTHD1Q6ZMT9 781 aa13.49□□□□□ -0.25
HMGB2-201ENST00000296503 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.49□□□□□ -0.253e-19■■■■■ 33
HMGB2-201ENST00000296503 HERC6Q8IVU3 1022 aa13.49□□□□□ -0.25
HMGB2-201ENST00000296503 SPRYD3Q8NCJ5 442 aa13.49□□□□□ -0.25
HMGB2-201ENST00000296503 SLC7A3Q8WY07 619 aa13.49□□□□□ -0.25
HMGB2-201ENST00000296503 TIFAQ96CG3 184 aa13.49□□□□□ -0.25
HMGB2-201ENST00000296503 ZNF668Q96K58 619 aaPredicted RBP13.49□□□□□ -0.25
HMGB2-201ENST00000296503 SCLT1Q96NL6 688 aa13.49□□□□□ -0.25
HMGB2-201ENST00000296503 AGO3Q9H9G7 860 aaKnown RBP13.49□□□□□ -0.25
HMGB2-201ENST00000296503 PADI3Q9ULW8 664 aa13.49□□□□□ -0.25
HMGB2-201ENST00000296503 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.251e-6■□□□□ 9.7
HMGB2-201ENST00000296503 CRYBB1P53674 252 aaPredicted RBP13.48□□□□□ -0.25
HMGB2-201ENST00000296503 PAK2Q13177 524 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 TMCO2Q7Z6W1 182 aaPredicted RBP13.48□□□□□ -0.25
HMGB2-201ENST00000296503 CATSPER3Q86XQ3 398 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 MYOCDQ8IZQ8 938 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 LINC01465Q8N7H1 131 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 PIGOQ8TEQ8 1089 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 CEP89Q96ST8 783 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 OSMRQ99650 979 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 SLC28A3Q9HAS3 691 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 TUFT1Q9NNX1 390 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 SUCLA2Q9P2R7 463 aaPredicted RBP13.48□□□□□ -0.25
HMGB2-201ENST00000296503 PCDHA11Q9Y5I1 949 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 IGKV6-21A0A0C4DH24 114 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 TLL1O43897 1013 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 GPR32O75388 356 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 MED24O75448 989 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 UPP2O95045 317 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 LYPLA2O95372 231 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 SPATA31C1P0DKV0 1188 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 MYOGP15173 224 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 CDC42EP1Q00587 391 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 DRP2Q13474 957 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 ODR4Q5SWX8 454 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 ZNF710Q8N1W2 664 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 NLRP7Q8WX94 980 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 NACC1Q96RE7 527 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 POLR3CQ9BUI4 534 aaPredicted RBP13.48□□□□□ -0.25
HMGB2-201ENST00000296503 NKX2-4Q9H2Z4 354 aa13.48□□□□□ -0.25
HMGB2-201ENST00000296503 SEMA6BQ9H3T3 888 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms