RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 STRA6Q9BX79 667 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 CYP26B1Q9NR63 512 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 PDGFCQ9NRA1 345 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 TLL2Q9Y6L7 1015 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 MAPTP10636 758 aaKnown RBP25.18■■□□□ 1.62
PTX3-201ENST00000295927 NR2F2P24468 414 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 MAN2A1Q16706 1144 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 PPFIBP1Q86W92 1011 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 KSR1Q8IVT5 923 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 TC2NQ8N9U0 490 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 GPBP1L1Q9HC44 474 aaPredicted RBP25.18■■□□□ 1.62
PTX3-201ENST00000295927 A0A1W2PQC6 194 aa25.17■■□□□ 1.62
PTX3-201ENST00000295927 CETN3O15182 167 aa25.17■■□□□ 1.62
PTX3-201ENST00000295927 TGFB1I1O43294 461 aa25.17■■□□□ 1.62
PTX3-201ENST00000295927 PPP1R37O75864 691 aa25.17■■□□□ 1.62
PTX3-201ENST00000295927 GNA14O95837 355 aa25.17■■□□□ 1.62
PTX3-201ENST00000295927 OATP04181 439 aa25.17■■□□□ 1.62
PTX3-201ENST00000295927 TCF7P36402 384 aaPredicted RBP25.17■■□□□ 1.62
PTX3-201ENST00000295927 ADKP55263 362 aaKnown RBP25.17■■□□□ 1.62
PTX3-201ENST00000295927 RBL2Q08999 1139 aa25.17■■□□□ 1.62
PTX3-201ENST00000295927 TAF1CQ15572 869 aaPredicted RBP25.17■■□□□ 1.62
PTX3-201ENST00000295927 CCDC40Q4G0X9 1142 aa25.17■■□□□ 1.62
PTX3-201ENST00000295927 ZNF467Q7Z7K2 595 aaPredicted RBP25.17■■□□□ 1.62
PTX3-201ENST00000295927 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.17■■□□□ 1.62
PTX3-201ENST00000295927 K7ENM7 598 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 TXNP10599 105 aaKnown RBP25.16■■□□□ 1.62
PTX3-201ENST00000295927 TBC1D8BQ0IIM8 1120 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 TTLL4Q14679 1199 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 VWA3BQ502W6 1294 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 DPP9Q86TI2 863 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 IKZF4Q9H2S9 585 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 PDLIM7Q9NR12 457 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 DGAT1O75907 488 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 MTERF2Q49AM1 385 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 TMEM63BQ5T3F8 832 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 FAM160B1Q5W0V3 765 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 DHX37Q8IY37 1157 aaKnown RBP25.16■■□□□ 1.62
PTX3-201ENST00000295927 SCFD2Q8WU76 684 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 GPR20Q99678 358 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 TMX1Q9H3N1 280 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 NDST4Q9H3R1 872 aa25.16■■□□□ 1.62
PTX3-201ENST00000295927 AKR1B15C9JRZ8 316 aaPredicted RBP25.15■■□□□ 1.62
PTX3-201ENST00000295927 GYPCP04921 128 aa25.15■■□□□ 1.62
PTX3-201ENST00000295927 STAT5BP51692 787 aa25.15■■□□□ 1.62
PTX3-201ENST00000295927 MARSP56192 900 aaKnown RBP25.15■■□□□ 1.62
PTX3-201ENST00000295927 HSDL1Q3SXM5 330 aa25.15■■□□□ 1.62
PTX3-201ENST00000295927 IFNL1Q8IU54 200 aa25.15■■□□□ 1.62
PTX3-201ENST00000295927 AFAP1L1Q8TED9 768 aa25.15■■□□□ 1.62
PTX3-201ENST00000295927 CPLX3Q8WVH0 158 aa25.15■■□□□ 1.62
PTX3-201ENST00000295927 COPS5Q92905 334 aa25.15■■□□□ 1.62
PTX3-201ENST00000295927 DIS3Q9Y2L1 958 aaKnown RBP25.15■■□□□ 1.62
PTX3-201ENST00000295927 ZNF236Q9UL36 1845 aa25.14■■□□□ 1.62
PTX3-201ENST00000295927 FAM155AB1AL88 458 aaPredicted RBP25.14■■□□□ 1.62
PTX3-201ENST00000295927 CLIC2O15247 247 aa25.14■■□□□ 1.62
PTX3-201ENST00000295927 NR3C1P04150 777 aa25.14■■□□□ 1.62
PTX3-201ENST00000295927 PEX3P56589 373 aa25.14■■□□□ 1.62
PTX3-201ENST00000295927 INHBEP58166 350 aa25.14■■□□□ 1.62
PTX3-201ENST00000295927 ALCAMQ13740 583 aa25.14■■□□□ 1.62
PTX3-201ENST00000295927 NOLC1Q14978 699 aaKnown RBP eCLIP25.14■■□□□ 1.62
PTX3-201ENST00000295927 TAPT1Q6NXT6 567 aa25.14■■□□□ 1.62
PTX3-201ENST00000295927 CCDC112Q8NEF3 446 aa25.14■■□□□ 1.62
PTX3-201ENST00000295927 VTA1Q9NP79 307 aa25.14■■□□□ 1.62
PTX3-201ENST00000295927 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.14■■□□□ 1.62
PTX3-201ENST00000295927 KIF3CO14782 793 aa25.14■■□□□ 1.61
PTX3-201ENST00000295927 NRDCO43847 1150 aa25.14■■□□□ 1.61
PTX3-201ENST00000295927 RPL13P26373 211 aaKnown RBP25.14■■□□□ 1.61
PTX3-201ENST00000295927 CASP14P31944 242 aa25.14■■□□□ 1.61
PTX3-201ENST00000295927 SOX10P56693 466 aa25.14■■□□□ 1.61
PTX3-201ENST00000295927 FKBP15Q5T1M5 1219 aa25.14■■□□□ 1.61
PTX3-201ENST00000295927 MAMDC4Q6UXC1 1216 aa25.14■■□□□ 1.61
PTX3-201ENST00000295927 MCPH1Q8NEM0 835 aa25.14■■□□□ 1.61
PTX3-201ENST00000295927 KIFAP3Q92845 792 aa25.14■■□□□ 1.61
PTX3-201ENST00000295927 SPATA33Q96N06 139 aa25.14■■□□□ 1.61
PTX3-201ENST00000295927 XPNPEP1Q9NQW7 623 aa25.14■■□□□ 1.61
PTX3-201ENST00000295927 SLC15A5A6NIM6 579 aa25.13■■□□□ 1.61
PTX3-201ENST00000295927 NOP56O00567 594 aaKnown RBP25.13■■□□□ 1.61
PTX3-201ENST00000295927 NCKAP1LP55160 1127 aa25.13■■□□□ 1.61
PTX3-201ENST00000295927 TRIM14Q14142 442 aa25.13■■□□□ 1.61
PTX3-201ENST00000295927 MAML3Q96JK9 1138 aa25.13■■□□□ 1.61
PTX3-201ENST00000295927 NIFKQ9BYG3 293 aaKnown RBP25.13■■□□□ 1.61
PTX3-201ENST00000295927 ST6GALNAC4Q9H4F1 302 aa25.13■■□□□ 1.61
PTX3-201ENST00000295927 ATP6V0A4Q9HBG4 840 aa25.13■■□□□ 1.61
PTX3-201ENST00000295927 ABT1Q9ULW3 272 aaKnown RBP25.13■■□□□ 1.61
PTX3-201ENST00000295927 FXR1P51114 621 aaKnown RBP eCLIP25.12■■□□□ 1.61
PTX3-201ENST00000295927 SYCP1Q15431 976 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 NFIL3Q16649 462 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 HAUS6Q7Z4H7 955 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 TRIM59Q8IWR1 403 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 SMC1BQ8NDV3 1235 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 CCDC102AQ96A19 550 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 ERGIC2Q96RQ1 377 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 KATNBL1Q9H079 304 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 GBP3Q9H0R5 595 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 AZI2Q9H6S1 392 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 NRBP2Q9NSY0 501 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 DOCK3Q8IZD9 2030 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 SLC16A4O15374 487 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 MFAP3LO75121 409 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 LGR5O75473 907 aa25.12■■□□□ 1.61
PTX3-201ENST00000295927 SNAI1O95863 264 aaPredicted RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms