RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 KCTD17Q8N5Z5 321 aa16.84■□□□□ 0.29
CCDC140-201ENST00000295226 TSEN34Q9BSV6 310 aaKnown RBP16.84■□□□□ 0.29
CCDC140-201ENST00000295226 TRIM9Q9C026 710 aa16.84■□□□□ 0.29
CCDC140-201ENST00000295226 GPRC5CQ9NQ84 441 aa16.84■□□□□ 0.29
CCDC140-201ENST00000295226 ARID2Q68CP9 1835 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 DNM1LO00429 736 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 KRT18P05783 430 aaKnown RBP16.83■□□□□ 0.28
CCDC140-201ENST00000295226 KLRC1P26715 233 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 GJA8P48165 433 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 FAM47CQ5HY64 1035 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 MARCH8Q5T0T0 291 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 LRSAM1Q6UWE0 723 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 C7orf31Q8N865 590 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 DIS3LQ8TF46 1054 aaKnown RBP16.83■□□□□ 0.28
CCDC140-201ENST00000295226 LMBR1Q8WVP7 490 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 TMEM143Q96AN5 459 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 DNAJC19Q96DA6 116 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 C7orf25Q9BPX7 421 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 KATNAL1Q9BW62 490 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 SUGCTQ9HAC7 445 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 EVPLQ92817 2033 aa16.83■□□□□ 0.28
CCDC140-201ENST00000295226 MOXD2PA6NHM9 499 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 GTPBP6O43824 516 aaPredicted RBP16.82■□□□□ 0.28
CCDC140-201ENST00000295226 POLGP54098 1239 aaPredicted RBP16.82■□□□□ 0.28
CCDC140-201ENST00000295226 ASIC1P78348 528 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 TBC1D8BQ0IIM8 1120 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 DPYDQ12882 1025 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 DRP2Q13474 957 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 ITGA7Q13683 1181 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 GIT2Q14161 759 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 ZNF484Q5JVG2 852 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 CCDC183Q5T5S1 534 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 ISM2Q6H9L7 571 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 KANK3Q6NY19 840 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 LRRC71Q8N4P6 559 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 GLT1D1Q96MS3 346 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 REEP2Q9BRK0 252 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 TMEM106CQ9BVX2 250 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 ZHX3Q9H4I2 956 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 MAGEF1Q9HAY2 307 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 XPNPEP1Q9NQW7 623 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 PDLIM7Q9NR12 457 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 PHF24Q9UPV7 400 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 PCDHA5Q9Y5H7 936 aa16.82■□□□□ 0.28
CCDC140-201ENST00000295226 IDEP14735 1019 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 AMPD3Q01432 767 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 EMC2Q15006 297 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 FAM102BQ5T8I3 360 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 METTL13Q8N6R0 699 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 HPS3Q969F9 1004 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 SENP6Q9GZR1 1112 aaPredicted RBP16.81■□□□□ 0.28
CCDC140-201ENST00000295226 DHX33Q9H6R0 707 aaKnown RBP16.81■□□□□ 0.28
CCDC140-201ENST00000295226 BIN1O00499 593 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 TREHO43280 583 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 HIP1RO75146 1068 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 C22orf31O95567 290 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 CLCN3P51790 818 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 MKRN4PQ13434 485 aaPredicted RBP16.81■□□□□ 0.28
CCDC140-201ENST00000295226 GDF6Q6KF10 455 aaPredicted RBP16.81■□□□□ 0.28
CCDC140-201ENST00000295226 EFCAB12Q6NXP0 572 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 MTHFD1LQ6UB35 978 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 DAW1Q8N136 415 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 ATP6V0A4Q9HBG4 840 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 STARD7Q9NQZ5 370 aa16.81■□□□□ 0.28
CCDC140-201ENST00000295226 LOXHD1Q8IVV2 1947 aa16.8■□□□□ 0.28
CCDC140-201ENST00000295226 NRCAMQ92823 1304 aa16.8■□□□□ 0.28
CCDC140-201ENST00000295226 C17orf102A2RUQ5 167 aa16.8■□□□□ 0.28
CCDC140-201ENST00000295226 KLRC4O43908 158 aa16.8■□□□□ 0.28
CCDC140-201ENST00000295226 MAFO75444 373 aaPredicted RBP16.8■□□□□ 0.28
CCDC140-201ENST00000295226 DGAT1O75907 488 aa16.8■□□□□ 0.28
CCDC140-201ENST00000295226 CABYRO75952 493 aa16.8■□□□□ 0.28
CCDC140-201ENST00000295226 EN2P19622 333 aaPredicted RBP16.8■□□□□ 0.28
CCDC140-201ENST00000295226 ATN1P54259 1190 aaPredicted RBP16.8■□□□□ 0.28
CCDC140-201ENST00000295226 MAPK7Q13164 816 aa16.8■□□□□ 0.28
CCDC140-201ENST00000295226 NFRKBQ6P4R8 1299 aa16.8■□□□□ 0.28
CCDC140-201ENST00000295226 RUFY4Q6ZNE9 571 aa16.8■□□□□ 0.28
CCDC140-201ENST00000295226 SLC7A3Q8WY07 619 aa16.8■□□□□ 0.28
CCDC140-201ENST00000295226 ZNF668Q96K58 619 aaPredicted RBP16.8■□□□□ 0.28
CCDC140-201ENST00000295226 TBC1D7Q9P0N9 293 aa16.8■□□□□ 0.28
CCDC140-201ENST00000295226 MKI67P46013 3256 aaKnown RBP16.79■□□□□ 0.28
CCDC140-201ENST00000295226 RPN1P04843 607 aaKnown RBP16.79■□□□□ 0.28
CCDC140-201ENST00000295226 GUCY2CP25092 1073 aa16.79■□□□□ 0.28
CCDC140-201ENST00000295226 RFC5P40937 340 aa16.79■□□□□ 0.28
CCDC140-201ENST00000295226 ADAM17P78536 824 aa16.79■□□□□ 0.28
CCDC140-201ENST00000295226 CCDC173Q0VFZ6 552 aa16.79■□□□□ 0.28
CCDC140-201ENST00000295226 KMT5BQ4FZB7 885 aa16.79■□□□□ 0.28
CCDC140-201ENST00000295226 ELOA2Q8IYF1 753 aaPredicted RBP16.79■□□□□ 0.28
CCDC140-201ENST00000295226 CCDC34Q96HJ3 373 aa16.79■□□□□ 0.28
CCDC140-201ENST00000295226 PANK4Q9NVE7 773 aa16.79■□□□□ 0.28
CCDC140-201ENST00000295226 KIAA1468Q9P260 1216 aa16.79■□□□□ 0.28
CCDC140-201ENST00000295226 GTF2IRD1Q9UHL9 959 aa16.79■□□□□ 0.28
CCDC140-201ENST00000295226 HOOK1Q9UJC3 728 aaKnown RBP16.79■□□□□ 0.28
CCDC140-201ENST00000295226 TUBE1Q9UJT0 475 aa16.79■□□□□ 0.28
CCDC140-201ENST00000295226 COL1A2P08123 1366 aa16.78■□□□□ 0.28
CCDC140-201ENST00000295226 RRN3P2A6NIE6 340 aa16.78■□□□□ 0.28
CCDC140-201ENST00000295226 KSR1Q8IVT5 923 aa16.78■□□□□ 0.28
CCDC140-201ENST00000295226 BSNDQ8WZ55 320 aa16.78■□□□□ 0.28
CCDC140-201ENST00000295226 SMARCE1Q969G3 411 aa16.78■□□□□ 0.28
CCDC140-201ENST00000295226 PAWRQ96IZ0 340 aaKnown RBP16.78■□□□□ 0.28
CCDC140-201ENST00000295226 PPP1R16BQ96T49 567 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms