RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 KNOP1Q1ED39 458 aaKnown RBP6.73□□□□□ -1.33
VCAM1-201ENST00000294728 EAPPQ56P03 285 aaPredicted RBP6.73□□□□□ -1.33
VCAM1-201ENST00000294728 TNFAIP8L3Q5GJ75 292 aa6.73□□□□□ -1.33
VCAM1-201ENST00000294728 BTNL9Q6UXG8 535 aa6.73□□□□□ -1.33
VCAM1-201ENST00000294728 KCNK18Q7Z418 384 aa6.73□□□□□ -1.33
VCAM1-201ENST00000294728 NBPF5PQ86XG9 351 aaPredicted RBP6.73□□□□□ -1.33
VCAM1-201ENST00000294728 OTUD6BQ8N6M0 293 aa6.73□□□□□ -1.33
VCAM1-201ENST00000294728 ERMNQ8TAM6 284 aa6.73□□□□□ -1.33
VCAM1-201ENST00000294728 DCAF4Q8WV16 495 aa6.73□□□□□ -1.33
VCAM1-201ENST00000294728 CCT8L2Q96SF2 557 aa6.73□□□□□ -1.33
VCAM1-201ENST00000294728 RAB17Q9H0T7 212 aa6.73□□□□□ -1.33
VCAM1-201ENST00000294728 JMJD4Q9H9V9 463 aa6.73□□□□□ -1.33
VCAM1-201ENST00000294728 SEL1LQ9UBV2 794 aa6.73□□□□□ -1.33
VCAM1-201ENST00000294728 PFASO15067 1338 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 GMNCA6NCL1 334 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 TMEM253P0C7T8 217 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 HSD17B3P37058 310 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 POLR2FP61218 127 aaKnown RBP6.72□□□□□ -1.33
VCAM1-201ENST00000294728 ERVK-9P63128 1117 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 PPATQ06203 517 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 TRAF1Q13077 416 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 GRIPAP1Q4V328 841 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 TDRD12Q587J7 1177 aaKnown RBP6.72□□□□□ -1.33
VCAM1-201ENST00000294728 WLSQ5T9L3 541 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 MAP1SQ66K74 1059 aaPredicted RBP6.72□□□□□ -1.33
VCAM1-201ENST00000294728 USP50Q70EL3 339 aaPredicted RBP6.72□□□□□ -1.33
VCAM1-201ENST00000294728 TXNRD3Q86VQ6 643 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 SLC9A9Q8IVB4 645 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 OLIG1Q8TAK6 271 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 KAT2BQ92831 832 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 DHX36Q9H2U1 1008 aaKnown RBP6.72□□□□□ -1.33
VCAM1-201ENST00000294728 CD209Q9NNX6 404 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 SIX2Q9NPC8 291 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 BIN2Q9UBW5 565 aaPredicted RBP6.72□□□□□ -1.33
VCAM1-201ENST00000294728 CCDC85CA6NKD9 419 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 USP17L5A8MUK1 530 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 CHUKO15111 745 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 MAPK13O15264 365 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 BBOX1O75936 387 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 DNAJC8O75937 253 aaPredicted RBP6.72□□□□□ -1.33
VCAM1-201ENST00000294728 TDP2O95551 362 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 FAM153BP0C7A2 387 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 PON1P27169 355 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 PTENP60484 403 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 FKBP1AP62942 108 aaKnown RBP6.72□□□□□ -1.33
VCAM1-201ENST00000294728 PPP2R2AP63151 447 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 SETQ01105 290 aaPredicted RBP6.72□□□□□ -1.33
VCAM1-201ENST00000294728 SLC7A5Q01650 507 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 ZNF844Q08AG5 666 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 ADAM9Q13443 819 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 PPP2R5AQ15172 486 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 UAP1Q16222 522 aaPredicted RBP6.72□□□□□ -1.33
VCAM1-201ENST00000294728 ECM1Q16610 540 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 NBPF9Q3BBW0 867 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 FAM153CQ494X1 144 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 ARSHQ5FYA8 562 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 KCNV1Q6PIU1 500 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 USP17L2Q6R6M4 530 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 TMC3Q7Z5M5 1100 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 NT5DC3Q86UY8 548 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 TEX11Q8IYF3 940 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 ETNPPLQ8TBG4 499 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 TRERF1Q96PN7 1200 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 KRT12Q99456 494 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 MCOLN1Q9GZU1 580 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 ZNF277Q9NRM2 450 aaPredicted RBP6.72□□□□□ -1.33
VCAM1-201ENST00000294728 ARMCX3Q9UH62 379 aaPredicted RBP6.72□□□□□ -1.33
VCAM1-201ENST00000294728 FAM153AQ9UHL3 310 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 PLAAQ9Y263 795 aa6.72□□□□□ -1.33
VCAM1-201ENST00000294728 GOLGA6L7A0A1B0GV03 622 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 PIK3CDO00329 1044 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 P4HA2O15460 535 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 ASAP2O43150 1006 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 NCK2O43639 380 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 KRT14P02533 472 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 SNRPFP62306 86 aaKnown RBP6.71□□□□□ -1.33
VCAM1-201ENST00000294728 PTK2Q05397 1052 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 XRCC4Q13426 336 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 BYSLQ13895 437 aaKnown RBP6.71□□□□□ -1.33
VCAM1-201ENST00000294728 GIT2Q14161 759 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 ITIH4Q14624 930 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 CST9Q5W186 159 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 CC2D2BQ6DHV5 1058 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 C11orf63Q6NUN7 778 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.71□□□□□ -1.33
VCAM1-201ENST00000294728 ZNF571Q7Z3V5 609 aaPredicted RBP6.71□□□□□ -1.33
VCAM1-201ENST00000294728 SLCO2A1Q92959 643 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 TATDN2Q93075 761 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 MYCBPQ99417 103 aaPredicted RBP6.71□□□□□ -1.33
VCAM1-201ENST00000294728 PLIN2Q99541 437 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 NUDT12Q9BQG2 462 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 STK33Q9BYT3 514 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 PARP2Q9UGN5 583 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 PGAP2Q9UHJ9 254 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 HDAC9Q9UKV0 1011 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 ABT1Q9ULW3 272 aaKnown RBP6.71□□□□□ -1.33
VCAM1-201ENST00000294728 CLEC11AQ9Y240 323 aa6.71□□□□□ -1.33
VCAM1-201ENST00000294728 PSME4Q14997 1843 aa6.71□□□□□ -1.34
VCAM1-201ENST00000294728 POTEMA6NI47 508 aa6.71□□□□□ -1.34
VCAM1-201ENST00000294728 MIF4GDA9UHW6 222 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms