RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PAXIP1Q6ZW49 1069 aaPredicted RBP10.07□□□□□ -0.8
PDPN-201ENST00000294489 STXBP4Q6ZWJ1 553 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 MYCT1Q8N699 235 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 ACRBPQ8NEB7 543 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 PARVGQ9HBI0 331 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 FAM207AQ9NSI2 230 aaPredicted RBP10.07□□□□□ -0.8
PDPN-201ENST00000294489 PKD2L1Q9P0L9 805 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 MORF4L1Q9UBU8 362 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 TCEAL9Q9UHQ7 104 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 CLEC11AQ9Y240 323 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 SIK3Q9Y2K2 1263 aa10.07□□□□□ -0.8
PDPN-201ENST00000294489 ZMYM2Q9UBW7 1377 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 IGSF9BQ9UPX0 1349 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 ARHGEF35A5YM69 484 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 RASSF10A6NK89 507 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 NKRFO15226 690 aaKnown RBP eCLIP10.06□□□□□ -0.8
PDPN-201ENST00000294489 MCCD1P59942 119 aaPredicted RBP10.06□□□□□ -0.8
PDPN-201ENST00000294489 ERVK-9P63128 1117 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 CCDC170Q8IYT3 715 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 NEK11Q8NG66 645 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 KCNN1Q92952 543 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 WDR24Q96S15 920 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 ST6GALNAC4Q9H4F1 302 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 JPH1Q9HDC5 661 aaPredicted RBP10.06□□□□□ -0.8
PDPN-201ENST00000294489 PDLIM7Q9NR12 457 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 TYW1Q9NV66 732 aaKnown RBP10.06□□□□□ -0.8
PDPN-201ENST00000294489 SAMM50Q9Y512 469 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 PRPF6O94906 941 aaKnown RBP10.06□□□□□ -0.8
PDPN-201ENST00000294489 ITGBL1O95965 494 aaPredicted RBP10.06□□□□□ -0.8
PDPN-201ENST00000294489 MYBP10242 640 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 TGFB3P10600 412 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 YWHABP31946 246 aaKnown RBP10.06□□□□□ -0.8
PDPN-201ENST00000294489 CDK17Q00537 523 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 WDR59Q6PJI9 974 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 ZNF720Q7Z2F6 126 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 TRIM59Q8IWR1 403 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 EDEM3Q9BZQ6 932 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 SLC9A2Q9UBY0 812 aa10.06□□□□□ -0.8
PDPN-201ENST00000294489 POTEB2H3BUK9 544 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 NCBP1Q09161 790 aaKnown RBP10.05□□□□□ -0.8
PDPN-201ENST00000294489 SPRYD7Q5W111 196 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 CACNA2D4Q7Z3S7 1137 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 NCAPG2Q86XI2 1143 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 BRI3BPQ8WY22 251 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 MYO1AQ9UBC5 1043 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 SYNGAP1Q96PV0 1343 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 SFI1A8K8P3 1242 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 BTBD19C9JJ37 291 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 RRP9O43818 475 aaKnown RBP10.05□□□□□ -0.8
PDPN-201ENST00000294489 DKC1O60832 514 aaKnown RBP eCLIP10.05□□□□□ -0.8
PDPN-201ENST00000294489 PSAPP07602 524 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 PPP2R3AQ06190 1150 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 CST9Q5W186 159 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 FRMD5Q7Z6J6 570 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 ABRAQ8N0Z2 381 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 MNS1Q8NEH6 495 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 BCAS3Q9H6U6 928 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 NHEJ1Q9H9Q4 299 aaPredicted RBP10.05□□□□□ -0.8
PDPN-201ENST00000294489 ARMCX3Q9UH62 379 aaPredicted RBP10.05□□□□□ -0.8
PDPN-201ENST00000294489 PLAGL2Q9UPG8 496 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 MAFBQ9Y5Q3 323 aaPredicted RBP10.05□□□□□ -0.8
PDPN-201ENST00000294489 ZNF862O60290 1169 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 HIP1RO75146 1068 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 BRD2P25440 801 aaKnown RBP10.05□□□□□ -0.8
PDPN-201ENST00000294489 HNRNPH3P31942 346 aaKnown RBP10.05□□□□□ -0.8
PDPN-201ENST00000294489 ACTR2P61160 394 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 ANO5Q75V66 913 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 FAM178BQ8IXR5 827 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 ZNF710Q8N1W2 664 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 C2orf69Q8N8R5 385 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 ANKRD7Q92527 254 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 CCDC42Q96M95 316 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 PAGR1Q9BTK6 254 aa10.05□□□□□ -0.8
PDPN-201ENST00000294489 NUCKS1Q9H1E3 243 aaKnown RBP10.05□□□□□ -0.8
PDPN-201ENST00000294489 METTL14Q9HCE5 456 aaKnown RBP10.05□□□□□ -0.8
PDPN-201ENST00000294489 PDHXO00330 501 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 TGFB1I1O43294 461 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 SUPT20HL2P0C7V6 817 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 GCLCP48506 637 aaPredicted RBP10.04□□□□□ -0.8
PDPN-201ENST00000294489 ALCAMQ13740 583 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 HSP90AA2PQ14568 343 aaPredicted RBP10.04□□□□□ -0.8
PDPN-201ENST00000294489 ZNF569Q5MCW4 686 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 SMCR8Q8TEV9 937 aaPredicted RBP10.04□□□□□ -0.8
PDPN-201ENST00000294489 CCDC43Q96MW1 224 aaKnown RBP10.04□□□□□ -0.8
PDPN-201ENST00000294489 MMP19Q99542 508 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 IRX2Q9BZI1 471 aaPredicted RBP10.04□□□□□ -0.8
PDPN-201ENST00000294489 HAUS4Q9H6D7 363 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 POLD4Q9HCU8 107 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 PCDHB13Q9Y5F0 798 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 MCM3APO60318 1980 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 ADGRA2Q96PE1 1338 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 BACH1O14867 736 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 FANCGO15287 622 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 SLC16A3O15427 465 aaKnown RBP10.04□□□□□ -0.8
PDPN-201ENST00000294489 EPB41P11171 864 aaKnown RBP10.04□□□□□ -0.8
PDPN-201ENST00000294489 ODR4Q5SWX8 454 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 KCNV1Q6PIU1 500 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 RRAGAQ7L523 313 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 KIAA1328Q86T90 577 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms