RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 CCDC63Q8NA47 563 aa15.96■□□□□ 0.15
CCNF-201ENST00000293968 PIGOQ8TEQ8 1089 aa15.96■□□□□ 0.15
CCNF-201ENST00000293968 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.96■□□□□ 0.15
CCNF-201ENST00000293968 PRMT1Q99873 361 aaKnown RBP15.96■□□□□ 0.15
CCNF-201ENST00000293968 RASAL2Q9UJF2 1139 aa15.96■□□□□ 0.15
CCNF-201ENST00000293968 PPP1R11O60927 126 aaPredicted RBP15.96■□□□□ 0.14
CCNF-201ENST00000293968 RASSF9O75901 435 aa15.96■□□□□ 0.14
CCNF-201ENST00000293968 GTF2IP78347 998 aa15.96■□□□□ 0.14
CCNF-201ENST00000293968 NT5DC3Q86UY8 548 aa15.96■□□□□ 0.14
CCNF-201ENST00000293968 FAM196BA6NMK8 535 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 TRIM37O94972 964 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 TTLL1O95922 423 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 ADCY1Q08828 1119 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 DRP2Q13474 957 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 CATSPER3Q86XQ3 398 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 ANO3Q9BYT9 981 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 KCNK9Q9NPC2 374 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 DNAJC12Q9UKB3 198 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 hCG_1984214I3L0E3 225 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 EDIL3O43854 480 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 TRIM49P0CI25 452 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 TRIM49CP0CI26 452 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 FERP16591 822 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 TAL1P17542 331 aaPredicted RBP15.95■□□□□ 0.14
CCNF-201ENST00000293968 C6orf89Q6UWU4 347 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 FRMD5Q7Z6J6 570 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 ZNF713Q8N859 430 aaPredicted RBP15.95■□□□□ 0.14
CCNF-201ENST00000293968 ANKRD42Q8N9B4 389 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 CD209Q9NNX6 404 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 SUCLA2Q9P2R7 463 aaPredicted RBP15.95■□□□□ 0.14
CCNF-201ENST00000293968 GSCP56915 257 aaPredicted RBP15.95■□□□□ 0.14
CCNF-201ENST00000293968 IFI35P80217 286 aaPredicted RBP15.95■□□□□ 0.14
CCNF-201ENST00000293968 DDR1Q08345 913 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 SLC29A2Q14542 456 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 DRAP1Q14919 205 aaPredicted RBP15.95■□□□□ 0.14
CCNF-201ENST00000293968 PLCB4Q15147 1175 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 EDRF1Q3B7T1 1238 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 ARSHQ5FYA8 562 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 PPP4R3CPQ6ZMV5 832 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 ARHGAP27Q6ZUM4 889 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 MAEAQ7L5Y9 396 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 FAM186BQ8IYM0 893 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 TATDN2Q93075 761 aa15.95■□□□□ 0.14
CCNF-201ENST00000293968 ZBTB5O15062 677 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 SCNN1DP51172 638 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 ZNF543Q08ER8 600 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 NBPF9Q3BBW0 867 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 CCDC50Q8IVM0 306 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 LRRC34Q8IZ02 419 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 CNOT10Q9H9A5 744 aaKnown RBP15.94■□□□□ 0.14
CCNF-201ENST00000293968 DNAJC17Q9NVM6 304 aaKnown RBP15.94■□□□□ 0.14
CCNF-201ENST00000293968 G3V3G9 751 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 GCFC2P16383 781 aaKnown RBP15.94■□□□□ 0.14
CCNF-201ENST00000293968 DCAF8Q5TAQ9 597 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 TPH2Q8IWU9 490 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 CCDC105Q8IYK2 499 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 SYCP3Q8IZU3 236 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 FBXO25Q8TCJ0 367 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 DBR1Q9UK59 544 aaKnown RBP15.94■□□□□ 0.14
CCNF-201ENST00000293968 STK38LQ9Y2H1 464 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 ARAP2Q8WZ64 1704 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 CCDC169A6NNP5 214 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 ZC2HC1CQ53FD0 456 aaPredicted RBP15.94■□□□□ 0.14
CCNF-201ENST00000293968 SLC10A5Q5PT55 438 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 FAM182BQ5T319 152 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 ZNF746Q6NUN9 644 aaPredicted RBP15.94■□□□□ 0.14
CCNF-201ENST00000293968 RGL1Q9NZL6 768 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 MTRF1LQ9UGC7 380 aaKnown RBP15.94■□□□□ 0.14
CCNF-201ENST00000293968 NMT1P30419 496 aaKnown RBP15.94■□□□□ 0.14
CCNF-201ENST00000293968 GIT2Q14161 759 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 MESDQ14696 234 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 SLF2Q8IX21 1173 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 C18orf8Q96DM3 657 aa15.94■□□□□ 0.14
CCNF-201ENST00000293968 ANKRD36CQ5JPF3 1778 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 CLSTN1O94985 981 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 DRD4P21917 467 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 GPSM2P81274 684 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 ZKSCAN8Q15776 578 aaPredicted RBP15.93■□□□□ 0.14
CCNF-201ENST00000293968 EPS8L3Q8TE67 593 aaKnown RBP15.93■□□□□ 0.14
CCNF-201ENST00000293968 NAP1L3Q99457 506 aaPredicted RBP15.93■□□□□ 0.14
CCNF-201ENST00000293968 TACO1Q9BSH4 297 aaKnown RBP15.93■□□□□ 0.14
CCNF-201ENST00000293968 METTL14Q9HCE5 456 aaKnown RBP15.93■□□□□ 0.14
CCNF-201ENST00000293968 ERVK-5Q9HDB9 667 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 CCT8L1PA6NM43 557 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 HOXA13P31271 388 aaPredicted RBP15.93■□□□□ 0.14
CCNF-201ENST00000293968 EIF3BP55884 814 aaKnown RBP15.93■□□□□ 0.14
CCNF-201ENST00000293968 CTTNQ14247 550 aaKnown RBP15.93■□□□□ 0.14
CCNF-201ENST00000293968 ARMC9Q7Z3E5 817 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 THAP2Q9H0W7 228 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 PCDHA2Q9Y5H9 948 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 EPHA7Q15375 998 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 QRICH1Q2TAL8 776 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 JAMLQ86YT9 394 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 CNBD1Q8NA66 436 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 ERP44Q9BS26 406 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 GGA1Q9UJY5 639 aa15.93■□□□□ 0.14
CCNF-201ENST00000293968 LMNB1P20700 586 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 TCP10Q12799 353 aa15.92■□□□□ 0.14
CCNF-201ENST00000293968 PREPLQ4J6C6 727 aaPredicted RBP15.92■□□□□ 0.14
CCNF-201ENST00000293968 RFFLQ8WZ73 363 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms