RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 CRYBB1P53674 252 aaPredicted RBP28.5■■■□□ 2.15
U2AF1-201ENST00000291552 SCRN1Q12765 414 aa28.5■■■□□ 2.15
U2AF1-201ENST00000291552 LRRC71Q8N4P6 559 aa28.5■■■□□ 2.15
U2AF1-201ENST00000291552 ADAM2Q99965 735 aa28.5■■■□□ 2.15
U2AF1-201ENST00000291552 ALG13Q9NP73 1137 aaKnown RBP28.5■■■□□ 2.15
U2AF1-201ENST00000291552 RGS18Q9NS28 235 aa28.5■■■□□ 2.15
U2AF1-201ENST00000291552 PLAGL2Q9UPG8 496 aa28.5■■■□□ 2.15
U2AF1-201ENST00000291552 C5orf42Q9H799 3197 aa28.49■■■□□ 2.15
U2AF1-201ENST00000291552 C9IYK1 514 aa28.49■■■□□ 2.15
U2AF1-201ENST00000291552 CSPG5O95196 566 aa28.49■■■□□ 2.15
U2AF1-201ENST00000291552 DNAJB1P25685 340 aa28.49■■■□□ 2.15
U2AF1-201ENST00000291552 HYAL1Q12794 435 aa28.49■■■□□ 2.15
U2AF1-201ENST00000291552 DSC3Q14574 896 aa28.49■■■□□ 2.15
U2AF1-201ENST00000291552 ETNPPLQ8TBG4 499 aa28.49■■■□□ 2.15
U2AF1-201ENST00000291552 P2RX5Q93086 422 aa28.49■■■□□ 2.15
U2AF1-201ENST00000291552 C22orf23Q9BZE7 217 aa28.49■■■□□ 2.15
U2AF1-201ENST00000291552 ADAMTS10Q9H324 1103 aa28.49■■■□□ 2.15
U2AF1-201ENST00000291552 KCNJ14Q9UNX9 436 aa28.49■■■□□ 2.15
U2AF1-201ENST00000291552 CEP131Q9UPN4 1083 aa28.49■■■□□ 2.15
U2AF1-201ENST00000291552 ITGB1P05556 798 aa28.48■■■□□ 2.15
U2AF1-201ENST00000291552 LTBRP36941 435 aa28.48■■■□□ 2.15
U2AF1-201ENST00000291552 JAK3P52333 1124 aa28.48■■■□□ 2.15
U2AF1-201ENST00000291552 PTCRAQ6ISU1 281 aaPredicted RBP28.48■■■□□ 2.15
U2AF1-201ENST00000291552 MAGEB2O15479 319 aa28.47■■■□□ 2.15
U2AF1-201ENST00000291552 SFNP31947 248 aa28.47■■■□□ 2.15
U2AF1-201ENST00000291552 EFCAB12Q6NXP0 572 aa28.47■■■□□ 2.15
U2AF1-201ENST00000291552 FAM178BQ8IXR5 827 aa28.47■■■□□ 2.15
U2AF1-201ENST00000291552 FAM177A1Q8N128 213 aaPredicted RBP28.47■■■□□ 2.15
U2AF1-201ENST00000291552 SPPL3Q8TCT6 385 aa28.47■■■□□ 2.15
U2AF1-201ENST00000291552 EPHX3Q9H6B9 360 aa28.47■■■□□ 2.15
U2AF1-201ENST00000291552 C1orf112Q9NSG2 853 aa28.47■■■□□ 2.15
U2AF1-201ENST00000291552 HCSTQ9UBK5 93 aa28.47■■■□□ 2.15
U2AF1-201ENST00000291552 RAPGEFL1Q9UHV5 662 aa28.47■■■□□ 2.15
U2AF1-201ENST00000291552 LRFN2Q9ULH4 789 aa28.47■■■□□ 2.15
U2AF1-201ENST00000291552 TPCN1Q9ULQ1 816 aa28.47■■■□□ 2.15
U2AF1-201ENST00000291552 DENND3A2RUS2 1198 aa28.46■■■□□ 2.15
U2AF1-201ENST00000291552 GRXCR2A6NFK2 248 aa28.46■■■□□ 2.15
U2AF1-201ENST00000291552 GPR182O15218 404 aa28.46■■■□□ 2.15
U2AF1-201ENST00000291552 STBD1O95210 358 aa28.46■■■□□ 2.15
U2AF1-201ENST00000291552 GTF2F1P35269 517 aaKnown RBP eCLIP28.46■■■□□ 2.15
U2AF1-201ENST00000291552 TARBP2Q15633 366 aaKnown RBP28.46■■■□□ 2.15
U2AF1-201ENST00000291552 CTC1Q2NKJ3 1217 aa28.46■■■□□ 2.15
U2AF1-201ENST00000291552 GALNT17Q6IS24 598 aa28.46■■■□□ 2.15
U2AF1-201ENST00000291552 CPLX2Q6PUV4 134 aaKnown RBP28.46■■■□□ 2.15
U2AF1-201ENST00000291552 MOXD1Q6UVY6 613 aa28.46■■■□□ 2.15
U2AF1-201ENST00000291552 FAM43BQ6ZT52 329 aaPredicted RBP28.46■■■□□ 2.15
U2AF1-201ENST00000291552 SLC24A5Q71RS6 500 aa28.46■■■□□ 2.15
U2AF1-201ENST00000291552 KLHL23Q8NBE8 558 aa28.46■■■□□ 2.15
U2AF1-201ENST00000291552 ZNF668Q96K58 619 aaPredicted RBP28.46■■■□□ 2.15
U2AF1-201ENST00000291552 CEP89Q96ST8 783 aa28.46■■■□□ 2.15
U2AF1-201ENST00000291552 PHF20Q9BVI0 1012 aa28.46■■■□□ 2.15
U2AF1-201ENST00000291552 GJB4Q9NTQ9 266 aa28.46■■■□□ 2.15
U2AF1-201ENST00000291552 CLDND1Q9NY35 253 aa28.46■■■□□ 2.15
U2AF1-201ENST00000291552 AKT3Q9Y243 479 aa28.46■■■□□ 2.15
U2AF1-201ENST00000291552 STK36Q9NRP7 1315 aa28.45■■■□□ 2.15
U2AF1-201ENST00000291552 TMEM150BA6NC51 233 aa28.45■■■□□ 2.14
U2AF1-201ENST00000291552 SLC37A4O43826 429 aa28.45■■■□□ 2.14
U2AF1-201ENST00000291552 PFKFB2O60825 505 aa28.45■■■□□ 2.14
U2AF1-201ENST00000291552 COL9A1P20849 921 aa28.45■■■□□ 2.14
U2AF1-201ENST00000291552 NLRP11P59045 1033 aaKnown RBP28.45■■■□□ 2.14
U2AF1-201ENST00000291552 NONOQ15233 471 aaKnown RBP eCLIP28.45■■■□□ 2.14
U2AF1-201ENST00000291552 INF2Q27J81 1249 aa28.45■■■□□ 2.14
U2AF1-201ENST00000291552 ODR4Q5SWX8 454 aa28.45■■■□□ 2.14
U2AF1-201ENST00000291552 FAM102BQ5T8I3 360 aa28.45■■■□□ 2.14
U2AF1-201ENST00000291552 MIER3Q7Z3K6 550 aa28.45■■■□□ 2.14
U2AF1-201ENST00000291552 RDM1Q8NG50 284 aa28.45■■■□□ 2.14
U2AF1-201ENST00000291552 NRBP2Q9NSY0 501 aa28.45■■■□□ 2.14
U2AF1-201ENST00000291552 PCDHB7Q9Y5E2 793 aa28.45■■■□□ 2.14
U2AF1-201ENST00000291552 CTDNEP1O95476 244 aa28.44■■■□□ 2.14
U2AF1-201ENST00000291552 IRS1P35568 1242 aa28.44■■■□□ 2.14
U2AF1-201ENST00000291552 FAM189BP81408 668 aa28.44■■■□□ 2.14
U2AF1-201ENST00000291552 DLX2Q07687 328 aaPredicted RBP28.44■■■□□ 2.14
U2AF1-201ENST00000291552 DRP2Q13474 957 aa28.44■■■□□ 2.14
U2AF1-201ENST00000291552 NAALADL2Q58DX5 795 aa28.44■■■□□ 2.14
U2AF1-201ENST00000291552 EP400NLQ6ZTU2 488 aa28.44■■■□□ 2.14
U2AF1-201ENST00000291552 MAP7D2Q96T17 732 aa28.44■■■□□ 2.14
U2AF1-201ENST00000291552 RNF19AQ9NV58 838 aa28.44■■■□□ 2.14
U2AF1-201ENST00000291552 PPP4R2Q9NY27 417 aa28.44■■■□□ 2.14
U2AF1-201ENST00000291552 TBKBP1A7MCY6 615 aa28.43■■■□□ 2.14
U2AF1-201ENST00000291552 GPC3P51654 580 aa28.43■■■□□ 2.14
U2AF1-201ENST00000291552 KRT25Q7Z3Z0 450 aa28.43■■■□□ 2.14
U2AF1-201ENST00000291552 ARID2Q68CP9 1835 aa28.42■■■□□ 2.14
U2AF1-201ENST00000291552 LINC01565O15544 149 aa28.42■■■□□ 2.14
U2AF1-201ENST00000291552 TBX10O75333 385 aa28.42■■■□□ 2.14
U2AF1-201ENST00000291552 FGFR1P11362 822 aa28.42■■■□□ 2.14
U2AF1-201ENST00000291552 ADGRD2Q7Z7M1 963 aa28.42■■■□□ 2.14
U2AF1-201ENST00000291552 OXER1Q8TDS5 423 aa28.42■■■□□ 2.14
U2AF1-201ENST00000291552 SLKQ9H2G2 1235 aaPredicted RBP28.42■■■□□ 2.14
U2AF1-201ENST00000291552 DDX25Q9UHL0 483 aaKnown RBP28.42■■■□□ 2.14
U2AF1-201ENST00000291552 PCDHGC5Q9Y5F6 944 aa28.42■■■□□ 2.14
U2AF1-201ENST00000291552 CDKL5O76039 1030 aa28.41■■■□□ 2.14
U2AF1-201ENST00000291552 TMOD1P28289 359 aa28.41■■■□□ 2.14
U2AF1-201ENST00000291552 AK2P54819 239 aa28.41■■■□□ 2.14
U2AF1-201ENST00000291552 TBC1D8BQ0IIM8 1120 aa28.41■■■□□ 2.14
U2AF1-201ENST00000291552 POF1BQ8WVV4 589 aa28.41■■■□□ 2.14
U2AF1-201ENST00000291552 SH2D3AQ9BRG2 576 aa28.41■■■□□ 2.14
U2AF1-201ENST00000291552 NIFKQ9BYG3 293 aaKnown RBP28.41■■■□□ 2.14
U2AF1-201ENST00000291552 TMEM161AQ9NX61 479 aa28.41■■■□□ 2.14
U2AF1-201ENST00000291552 SEPT9Q9UHD8 586 aaPredicted RBP28.41■■■□□ 2.14
U2AF1-201ENST00000291552 EML1O00423 815 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms