RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 KLRC1P26715 233 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 KRT2P35908 639 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 CLCN3P51790 818 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 LSM11P83369 360 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCDC58-201ENST00000291458 SKIV2LQ15477 1246 aaKnown RBP11.03□□□□□ -0.64
CCDC58-201ENST00000291458 EARS2Q5JPH6 523 aaKnown RBP11.03□□□□□ -0.64
CCDC58-201ENST00000291458 NEK8Q86SG6 692 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCDC58-201ENST00000291458 SMAP1Q8IYB5 467 aaPredicted RBP11.03□□□□□ -0.64
CCDC58-201ENST00000291458 BANK1Q8NDB2 785 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 PHOSPHO2Q8TCD6 241 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 WASF1Q92558 559 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 SLC5A5Q92911 643 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 YME1L1Q96TA2 773 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 SH2D3AQ9BRG2 576 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 SLC4A5Q9BY07 1137 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 BRMS1Q9HCU9 246 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 SEPT9Q9UHD8 586 aaPredicted RBP11.03□□□□□ -0.64
CCDC58-201ENST00000291458 PCDHA10Q9Y5I2 948 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 KIAA1671Q9BY89 1806 aa11.02□□□□□ -0.64
CCDC58-201ENST00000291458 IGKV6D-21A0A0A0MT36 114 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.02□□□□□ -0.65
CCDC58-201ENST00000291458 EFCAB14O75071 495 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 GJB5O95377 273 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 VTNP04004 478 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 OATP04181 439 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 ATP2B1P20020 1258 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 USP11P51784 963 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 PAK2Q13177 524 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 TRIM29Q14134 588 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 MTERF2Q49AM1 385 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 FAM26DQ5JW98 314 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 FBXO47Q5MNV8 452 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 GALNT17Q6IS24 598 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 TSHZ1Q6ZSZ6 1077 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 LRRC71Q8N4P6 559 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 SCLT1Q96NL6 688 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 AGO3Q9H9G7 860 aaKnown RBP11.02□□□□□ -0.65
CCDC58-201ENST00000291458 AKT3Q9Y243 479 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 PCDHA2Q9Y5H9 948 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 ARID2Q68CP9 1835 aa11.02□□□□□ -0.65
CCDC58-201ENST00000291458 LINC01553A4QN01 128 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 ZBTB42B2RXF5 422 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 ZNF862O60290 1169 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 PSMD10O75832 226 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 C22orf31O95567 290 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 COL9A1P20849 921 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 SLC26A2P50443 739 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 JAK3P52333 1124 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 NFX1Q12986 1120 aaKnown RBP11.01□□□□□ -0.65
CCDC58-201ENST00000291458 KIZQ2M2Z5 673 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 Q4G0T1 1027 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 IER5Q5VY09 327 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 DMRTA1Q5VZB9 504 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 PLA2G4FQ68DD2 849 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 NCAPH2Q6IBW4 605 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 DIS3L2Q8IYB7 885 aaKnown RBP11.01□□□□□ -0.65
CCDC58-201ENST00000291458 ETNPPLQ8TBG4 499 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 LINC01599Q8WXQ3 324 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 APBB2Q92870 758 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 TNPO1Q92973 898 aaKnown RBP11.01□□□□□ -0.65
CCDC58-201ENST00000291458 RIT2Q99578 217 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 OSMRQ99650 979 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 C17orf80Q9BSJ5 609 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 SUGCTQ9HAC7 445 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 CDHR5Q9HBB8 845 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 COL1A2P08123 1366 aa11.01□□□□□ -0.65
CCDC58-201ENST00000291458 SMIM35A0A1B0GVV1 85 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 BTBD18B2RXH4 712 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 TK2O00142 265 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 EML1O00423 815 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 WNT7AO00755 349 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 MMP1P03956 469 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 SFNP31947 248 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 GRB10Q13322 594 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 PAN2Q504Q3 1202 aaKnown RBP11□□□□□ -0.65
CCDC58-201ENST00000291458 ZNF484Q5JVG2 852 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 IL17RAQ96F46 866 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 FAM167AQ96KS9 214 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 MAP7D2Q96T17 732 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 RAD9AQ99638 391 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 KIF2CQ99661 725 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 CELF4Q9BZC1 486 aaKnown RBP11□□□□□ -0.65
CCDC58-201ENST00000291458 LIMCH1Q9UPQ0 1083 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 MAFBQ9Y5Q3 323 aaPredicted RBP11□□□□□ -0.65
CCDC58-201ENST00000291458 PRRC2BQ5JSZ5 2229 aaKnown RBP11□□□□□ -0.65
CCDC58-201ENST00000291458 LAMA2P24043 3122 aaKnown RBP11□□□□□ -0.65
CCDC58-201ENST00000291458 RALGAPA2Q2PPJ7 1873 aa11□□□□□ -0.65
CCDC58-201ENST00000291458 ATG2AQ2TAZ0 1938 aa10.99□□□□□ -0.65
CCDC58-201ENST00000291458 GATMP50440 423 aa10.99□□□□□ -0.65
CCDC58-201ENST00000291458 CYP4A11Q02928 519 aa10.99□□□□□ -0.65
CCDC58-201ENST00000291458 TBC1D8BQ0IIM8 1120 aa10.99□□□□□ -0.65
CCDC58-201ENST00000291458 GNL2Q13823 731 aaKnown RBP10.99□□□□□ -0.65
CCDC58-201ENST00000291458 EFCAB12Q6NXP0 572 aa10.99□□□□□ -0.65
CCDC58-201ENST00000291458 MOXD1Q6UVY6 613 aa10.99□□□□□ -0.65
CCDC58-201ENST00000291458 RPAINQ86UA6 219 aa10.99□□□□□ -0.65
CCDC58-201ENST00000291458 KIAA0319LQ8IZA0 1049 aa10.99□□□□□ -0.65
CCDC58-201ENST00000291458 TMEM40Q8WWA1 233 aa10.99□□□□□ -0.65
CCDC58-201ENST00000291458 C8orf76Q96K31 380 aa10.99□□□□□ -0.65
CCDC58-201ENST00000291458 TGS1Q96RS0 853 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms