RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 CYBAP13498 195 aa12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 CYP11B2P19099 503 aa12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 CNGA1P29973 690 aa12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 QARSP47897 775 aaKnown RBP12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 PRKCEQ02156 737 aa12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 TNFAIP2Q03169 654 aa12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 NEDD9Q14511 834 aa12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 KIF22Q14807 665 aa12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 SPECC1LQ69YQ0 1117 aa12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 GPBP1Q86WP2 473 aa12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 SH3TC2Q8TF17 1288 aa12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 DDX12PQ92771 950 aa12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 MPHOSPH6Q99547 160 aaKnown RBP12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 SLC5A4Q9NY91 659 aa12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 GNEQ9Y223 722 aaKnown RBP12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 TRIM17Q9Y577 477 aa12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 PTCH2Q9Y6C5 1203 aa12.69□□□□□ -0.38
CHRNB3-201ENST00000289957 A0A1B0GTH6 734 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 B4DLN1 442 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 ADCY3O60266 1144 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 ZRANB2O95218 330 aaKnown RBP eCLIP12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 YWHABP31946 246 aaKnown RBP12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 JAK3P52333 1124 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 CHMP4BP1P59074 171 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 DUSP28Q4G0W2 176 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 TC2NQ8N9U0 490 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 TRAPPC12Q8WVT3 735 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 DNAJC19Q96DA6 116 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 TUFT1Q9NNX1 390 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 GPRC5CQ9NQ84 441 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 ZNF446Q9NWS9 450 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 TBC1D7Q9P0N9 293 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 GDAQ9Y2T3 454 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 KDM3AQ9Y4C1 1321 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 NOP56O00567 594 aaKnown RBP12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 PGK1P00558 417 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 XRCC5P13010 732 aaKnown RBP12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 FECHP22830 423 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 MAP2K1Q02750 393 aaPredicted RBP12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 ERCC6LQ2NKX8 1250 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 PANX2Q96RD6 677 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 BAG1Q99933 345 aaPredicted RBP12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 NAA15Q9BXJ9 866 aaKnown RBP12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 RNPEPQ9H4A4 650 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 SAGE1Q9NXZ1 904 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 DNM3Q9UQ16 869 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 NFE2L3Q9Y4A8 694 aa12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 V9GYY5 206 aaPredicted RBP12.68□□□□□ -0.38
CHRNB3-201ENST00000289957 IGSF9BQ9UPX0 1349 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 IGKV6D-21A0A0A0MT36 114 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 PSAPP07602 524 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 RARRES1P49788 294 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 CLCN6P51797 869 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 PSMC5P62195 406 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 ASIC1P78348 528 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 TERF2Q15554 542 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 RINT1Q6NUQ1 792 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 SV2BQ7L1I2 683 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 TLK2Q86UE8 772 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 OR6J1Q8NGC5 347 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 RAET1EQ8TD07 263 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 REEP2Q9BRK0 252 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 BEGAINQ9BUH8 593 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 NT5C3AQ9H0P0 336 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 IKZF4Q9H2S9 585 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 ZSWIM4Q9H7M6 989 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 ZNF302Q9NR11 478 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 STK17AQ9UEE5 414 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 ITIH6Q6UXX5 1313 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 USO1O60763 962 aaKnown RBP12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 EYA4O95677 639 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 GH1P01241 217 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 RPN1P04843 607 aaKnown RBP12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 IDEP14735 1019 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 SFNP31947 248 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 NR1I3Q14994 352 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 MIS18BP1Q6P0N0 1132 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 SYT2Q8N9I0 419 aaPredicted RBP12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 MNS1Q8NEH6 495 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 SEPT1Q8WYJ6 367 aa12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 SEPT9Q9UHD8 586 aaPredicted RBP12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 MAFBQ9Y5Q3 323 aaPredicted RBP12.67□□□□□ -0.38
CHRNB3-201ENST00000289957 LOC102724159A0A0B4J2E5 919 aa12.66□□□□□ -0.38
CHRNB3-201ENST00000289957 FANCGO15287 622 aa12.66□□□□□ -0.38
CHRNB3-201ENST00000289957 GTPBP6O43824 516 aaPredicted RBP12.66□□□□□ -0.38
CHRNB3-201ENST00000289957 MMP3P08254 477 aa12.66□□□□□ -0.38
CHRNB3-201ENST00000289957 PBX1P40424 430 aa12.66□□□□□ -0.38
CHRNB3-201ENST00000289957 PWP2Q15269 919 aaKnown RBP12.66□□□□□ -0.38
CHRNB3-201ENST00000289957 MTERF2Q49AM1 385 aa12.66□□□□□ -0.38
CHRNB3-201ENST00000289957 ARHGAP29Q52LW3 1261 aa12.66□□□□□ -0.38
CHRNB3-201ENST00000289957 DAW1Q8N136 415 aa12.66□□□□□ -0.38
CHRNB3-201ENST00000289957 UBXN4Q92575 508 aa12.66□□□□□ -0.38
CHRNB3-201ENST00000289957 GLG1Q92896 1179 aa12.66□□□□□ -0.38
CHRNB3-201ENST00000289957 MED15Q96RN5 788 aa12.66□□□□□ -0.38
CHRNB3-201ENST00000289957 PYM1Q9BRP8 204 aaKnown RBP12.66□□□□□ -0.38
CHRNB3-201ENST00000289957 ZHX3Q9H4I2 956 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms