RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 INO80BQ9C086 356 aaPredicted RBP16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 SERPINB13Q9UIV8 391 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 AKT3Q9Y243 479 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 ZNF609O15014 1411 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 ZNF473Q8WTR7 871 aaKnown RBP16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 C1orf54Q8WWF1 131 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 ADPGKQ9BRR6 497 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 SRP68Q9UHB9 627 aaKnown RBP16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 POTEFA5A3E0 1075 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 POTEIP0CG38 1075 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 POTEGQ6S5H5 508 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 POTEEQ6S8J3 1075 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 YY1AP1Q9H869 796 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 HPCAL4Q9UM19 191 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 IQANK1A0A1B0GTG1 560 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 ZBBXA8MT70 800 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 PI4K2BG5E9Z4 385 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 M0QZ92 97 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 EEF1B2P24534 225 aaKnown RBP16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 PRDX5P30044 214 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 PDZD4Q76G19 769 aaPredicted RBP16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 NRBP2Q9NSY0 501 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 IQGAP3Q86VI3 1631 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 STMN1P16949 149 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 PSMA2P25787 234 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 CACNB3P54284 484 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 RHOT2Q8IXI1 618 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 PIGBQ92521 554 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 RNF25Q96BH1 459 aaPredicted RBP16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 FNDC3AQ9Y2H6 1198 aaKnown RBP16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 FXR1P51114 621 aaKnown RBP eCLIP16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 RAD9BQ6WBX8 426 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 TRMT10CQ7L0Y3 403 aaKnown RBP16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 EEPD1Q7L9B9 569 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 LCA5Q86VQ0 697 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 SKA2Q8WVK7 121 aaPredicted RBP16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 TMEM47Q9BQJ4 181 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 WDR11Q9BZH6 1224 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 ALG13Q9NP73 1137 aaKnown RBP16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 AGPAT5Q9NUQ2 364 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 LIMA1Q9UHB6 759 aaKnown RBP16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 NUB1Q9Y5A7 615 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 SYNGAP1Q96PV0 1343 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 GNGT2O14610 69 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 TLR3O15455 904 aaKnown RBP16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 MDH1BQ5I0G3 518 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 PPP4R3CPQ6ZMV5 832 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 CAPN11Q9UMQ6 739 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 LEMD3Q9Y2U8 911 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 NRKQ7Z2Y5 1582 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 KRT80Q6KB66 452 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 SULF1Q8IWU6 871 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 EXT2Q93063 718 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 STX1BP61266 288 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 AS3MTQ9HBK9 375 aa16.44■□□□□ 0.22
SHROOM4-201ENST00000289292 RAD23BP54727 409 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 CHMP6Q96FZ7 201 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 HEXIM2Q96MH2 286 aaKnown RBP16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 TUBB6Q9BUF5 446 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 PCDHA6Q9UN73 950 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 PCDHA8Q9Y5H6 950 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 PRPSAP2O60256 369 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 OATP04181 439 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 MARK3P27448 753 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 MIS18BP1Q6P0N0 1132 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 STAG2Q8N3U4 1231 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 TET3O43151 1660 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 hCG_1984214I3L0E3 225 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 CREB3O43889 395 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 MGEA5O60502 916 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 ZNF18P17022 549 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 GPC5P78333 572 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 FAM160B1Q5W0V3 765 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 RYBPQ8N488 228 aaPredicted RBP16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 ZNF713Q8N859 430 aaPredicted RBP16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 TRIM51Q9BSJ1 452 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 ERBB3P21860 1342 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 GRID2IPA4D2P6 1211 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 BRAFP15056 766 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 EXOSC10Q01780 885 aaKnown RBP16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 DRAP1Q14919 205 aaPredicted RBP16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 FAM47CQ5HY64 1035 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 C1orf146Q5VVC0 180 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 PDXDC1Q6P996 788 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 MYLK4Q86YV6 388 aaPredicted RBP16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 ZNF564Q8TBZ8 553 aaPredicted RBP16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 TRIM55Q9BYV6 548 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 ALDH8A1Q9H2A2 487 aaPredicted RBP16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 ETNK1Q9HBU6 452 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 FAM196BA6NMK8 535 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 TDP2O95551 362 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 CRLF3Q8IUI8 442 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 TMEM60Q9H2L4 133 aa16.43■□□□□ 0.22
SHROOM4-201ENST00000289292 SPHKAPQ2M3C7 1700 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 PHF20L1A8MW92 1017 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 COPEO14579 308 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 NCAPHQ15003 741 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 BRIP1Q9BX63 1249 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms