RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 PRR29P0C7W0 189 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 PRKAR2AP13861 404 aaKnown RBP9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 CTCFP49711 727 aaPredicted RBP9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 CYP4A11Q02928 519 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 ALCAMQ13740 583 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 TARBP2Q15633 366 aaKnown RBP9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 TAF12Q16514 161 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 DNAJC19Q96DA6 116 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 SPC25Q9HBM1 224 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 PDLIM7Q9NR12 457 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 CYP26B1Q9NR63 512 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 SYNRGQ9UMZ2 1314 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 MYMKA6NI61 221 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 KLRC4O43908 158 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 HBP1O60381 514 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 DGAT1O75907 488 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 F2P00734 622 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 GRK4P32298 578 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 RARRES1P49788 294 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 CAMK4Q16566 473 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 HSDL1Q3SXM5 330 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 FAM47CQ5HY64 1035 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 ZNF658Q5TYW1 1059 aaPredicted RBP9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 CCDC65Q8IXS2 484 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 MCPH1Q8NEM0 835 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 BACH1O14867 736 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 CABYRO75952 493 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 STIM1Q13586 685 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 CUL4BQ13620 913 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 PLCB4Q15147 1175 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 RINT1Q6NUQ1 792 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 ANO5Q75V66 913 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 DPH6Q7L8W6 267 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 ZNF710Q8N1W2 664 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 KLHDC9Q8NEP7 349 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 FAM212AQ96EL1 285 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 C16orf70Q9BSU1 422 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 ATP6V0A4Q9HBG4 840 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 MAN1B1Q9UKM7 699 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 ANKRD62A6NC57 917 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 HAS3O00219 553 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 RPLP2P05387 115 aaKnown RBP9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 PSMC6P62333 389 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 SESTD1Q86VW0 696 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 KIFAP3Q92845 792 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 COPS5Q92905 334 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 TRIM5Q9C035 493 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 OLFML3Q9NRN5 406 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 DOCK3Q8IZD9 2030 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 ZNF862O60290 1169 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 ADAMTS4O75173 837 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 INHAP05111 366 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 ATP4AP20648 1035 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 PTPN11Q06124 597 aaPredicted RBP9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 GIT2Q14161 759 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 ARSHQ5FYA8 562 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 CTU1Q7Z7A3 348 aaKnown RBP9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 MLKLQ8NB16 471 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 AFG1LQ8WV93 481 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 DDX12PQ92771 950 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 NAT10Q9H0A0 1025 aaKnown RBP9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 BHMT2Q9H2M3 363 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 TSPY26PQ9H489 355 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 BCAS3Q9H6U6 928 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 EXOC1Q9NV70 894 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 SYCE3A1L190 88 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 RRN3P2A6NIE6 340 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 MAFO75444 373 aaPredicted RBP9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 AFMP43652 599 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 TYRO3Q06418 890 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 FSCN1Q16658 493 aaKnown RBP9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 FILIP1LQ4L180 1135 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 PADI6Q6TGC4 694 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 HVCN1Q96D96 273 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 ST6GALNAC4Q9H4F1 302 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 MMRN2Q9H8L6 949 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 TRIM17Q9Y577 477 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 COL4A3BPQ9Y5P4 624 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 PTCH2Q9Y6C5 1203 aa9.32□□□□□ -0.92
PTPDC1-201ENST00000288976 H0YCG3 227 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 EIF3DO15371 548 aaKnown RBP eCLIP9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 TRIM21P19474 475 aaKnown RBP9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 HOXC8P31273 242 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 DNA2P51530 1060 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 PCSK9Q8NBP7 692 aaKnown RBP9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 CAGE1Q8TC20 777 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 TCP11Q8WWU5 503 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 BICD1Q96G01 975 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 UIMC1Q96RL1 719 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 RUSC1Q9BVN2 902 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 SEPT9Q9UHD8 586 aaPredicted RBP9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 PCDHA5Q9Y5H7 936 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 IGKV6-21A0A0C4DH24 114 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 TBCAO75347 108 aaKnown RBP9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 TNNT1P13805 278 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 ASIC1P78348 528 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 PRAMEF19Q5SWL8 479 aa9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 MTG1Q9BT17 334 aaPredicted RBP9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 DHX33Q9H6R0 707 aaKnown RBP9.31□□□□□ -0.92
PTPDC1-201ENST00000288976 HMX1Q9NP08 348 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms