RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 KLHDC7AQ5VTJ3 777 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 BORCS6Q96GS4 357 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 AS3MTQ9HBK9 375 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 GCNT4Q9P109 453 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 K7ENM7 598 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 SLC16A3O15427 465 aaKnown RBP21.13■□□□□ 0.97
BRAF-201ENST00000288602 SORBS3O60504 671 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 PNMA6AP0CW24 399 aaPredicted RBP21.13■□□□□ 0.97
BRAF-201ENST00000288602 RARRES1P49788 294 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 KLHL30Q0D2K2 578 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 DNAAF5Q86Y56 855 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 SYCP3Q8IZU3 236 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 METTL14Q9HCE5 456 aaKnown RBP21.13■□□□□ 0.97
BRAF-201ENST00000288602 GPRC5CQ9NQ84 441 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 AGPAT3Q9NRZ7 376 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 GPRC5DQ9NZD1 345 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 KCND2Q9NZV8 630 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 SEL1LQ9UBV2 794 aa21.13■□□□□ 0.97
BRAF-201ENST00000288602 PARP14Q460N5 1801 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 A0A087X0T9 212 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 ZRANB2O95218 330 aaKnown RBP eCLIP21.12■□□□□ 0.97
BRAF-201ENST00000288602 FAM228BP0C875 321 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 YWHABP31946 246 aaKnown RBP21.12■□□□□ 0.97
BRAF-201ENST00000288602 PSMC2P35998 433 aaKnown RBP21.12■□□□□ 0.97
BRAF-201ENST00000288602 CC2D1AQ6P1N0 951 aaPredicted RBP21.12■□□□□ 0.97
BRAF-201ENST00000288602 NEK9Q8TD19 979 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 FBXO41Q8TF61 875 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 SPAG5Q96R06 1193 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 PSMB7Q99436 277 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 GBP3Q9H0R5 595 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 NUCKS1Q9H1E3 243 aaKnown RBP21.12■□□□□ 0.97
BRAF-201ENST00000288602 TELO2Q9Y4R8 837 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 PEX10O60683 326 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 NPEPPSP55786 919 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 TMEM132BQ14DG7 1078 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 ASIC2Q16515 512 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 PLA2G4FQ68DD2 849 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 APOBEC3FQ8IUX4 373 aaKnown RBP21.12■□□□□ 0.97
BRAF-201ENST00000288602 RBM46Q8TBY0 533 aaKnown RBP21.12■□□□□ 0.97
BRAF-201ENST00000288602 SYN2Q92777 582 aaPredicted RBP21.12■□□□□ 0.97
BRAF-201ENST00000288602 KLRG1Q96E93 195 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 TBC1D22BQ9NU19 505 aa21.12■□□□□ 0.97
BRAF-201ENST00000288602 POLR2AP24928 1970 aaKnown RBP21.11■□□□□ 0.97
BRAF-201ENST00000288602 TRIM49P0CI25 452 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 TRIM49CP0CI26 452 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 ARHGAP27Q6ZUM4 889 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 HS2ST1Q7LGA3 356 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 REPS2Q8NFH8 660 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 PACSIN1Q9BY11 444 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 PCIF1Q9H4Z3 704 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 MAP3K20Q9NYL2 800 aaKnown RBP21.11■□□□□ 0.97
BRAF-201ENST00000288602 ZNF214Q9UL59 606 aaPredicted RBP21.11■□□□□ 0.97
BRAF-201ENST00000288602 BACH1O14867 736 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 NAP1L1P55209 391 aaKnown RBP21.11■□□□□ 0.97
BRAF-201ENST00000288602 GBP6Q6ZN66 633 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 CCDC125Q86Z20 511 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 ZBTB9Q96C00 473 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 SIX2Q9NPC8 291 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 ST7Q9NRC1 585 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 AIPL1Q9NZN9 384 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 TCEAL9Q9UHQ7 104 aa21.11■□□□□ 0.97
BRAF-201ENST00000288602 TULP1O00294 542 aaPredicted RBP21.1■□□□□ 0.97
BRAF-201ENST00000288602 TACC1O75410 805 aa21.1■□□□□ 0.97
BRAF-201ENST00000288602 DSG3P32926 999 aa21.1■□□□□ 0.97
BRAF-201ENST00000288602 SP4Q02446 784 aa21.1■□□□□ 0.97
BRAF-201ENST00000288602 PTK2Q05397 1052 aa21.1■□□□□ 0.97
BRAF-201ENST00000288602 TRIM58Q8NG06 486 aa21.1■□□□□ 0.97
BRAF-201ENST00000288602 CCDC43Q96MW1 224 aaKnown RBP21.1■□□□□ 0.97
BRAF-201ENST00000288602 RLFQ13129 1914 aa21.1■□□□□ 0.97
BRAF-201ENST00000288602 NCK2O43639 380 aa21.1■□□□□ 0.97
BRAF-201ENST00000288602 NR3C2P08235 984 aa21.1■□□□□ 0.97
BRAF-201ENST00000288602 IRF2BP2Q7Z5L9 587 aa21.1■□□□□ 0.97
BRAF-201ENST00000288602 PLCB1Q9NQ66 1216 aa21.1■□□□□ 0.97
BRAF-201ENST00000288602 PDE2AO00408 941 aaPredicted RBP21.09■□□□□ 0.97
BRAF-201ENST00000288602 PPP1R37O75864 691 aa21.09■□□□□ 0.97
BRAF-201ENST00000288602 SASH3O75995 380 aa21.09■□□□□ 0.97
BRAF-201ENST00000288602 CXCR5P32302 372 aa21.09■□□□□ 0.97
BRAF-201ENST00000288602 BMS1Q14692 1282 aaKnown RBP21.09■□□□□ 0.97
BRAF-201ENST00000288602 CBWD6Q4V339 395 aa21.09■□□□□ 0.97
BRAF-201ENST00000288602 CBWD3Q5JTY5 395 aa21.09■□□□□ 0.97
BRAF-201ENST00000288602 CBWD5Q5RIA9 395 aa21.09■□□□□ 0.97
BRAF-201ENST00000288602 STXBP4Q6ZWJ1 553 aa21.09■□□□□ 0.97
BRAF-201ENST00000288602 STRA6Q9BX79 667 aa21.09■□□□□ 0.97
BRAF-201ENST00000288602 FAM53CQ9NYF3 392 aa21.09■□□□□ 0.97
BRAF-201ENST00000288602 SSC5DA1L4H1 1573 aa21.09■□□□□ 0.97
BRAF-201ENST00000288602 RBAK-RBAKDNI3L0D1 243 aa21.09■□□□□ 0.97
BRAF-201ENST00000288602 SLC18A3Q16572 532 aa21.09■□□□□ 0.97
BRAF-201ENST00000288602 ZNF571Q7Z3V5 609 aaPredicted RBP21.09■□□□□ 0.97
BRAF-201ENST00000288602 ZSWIM2Q8NEG5 633 aa21.09■□□□□ 0.97
BRAF-201ENST00000288602 LARSQ9P2J5 1176 aaKnown RBP21.09■□□□□ 0.97
BRAF-201ENST00000288602 FRMD4BQ9Y2L6 1034 aa21.09■□□□□ 0.97
BRAF-201ENST00000288602 FAM170AA1A519 330 aa21.08■□□□□ 0.97
BRAF-201ENST00000288602 PJA2O43164 708 aa21.08■□□□□ 0.97
BRAF-201ENST00000288602 EXOC3O60645 756 aa21.08■□□□□ 0.97
BRAF-201ENST00000288602 XKR9Q5GH70 373 aa21.08■□□□□ 0.97
BRAF-201ENST00000288602 NFRKBQ6P4R8 1299 aa21.08■□□□□ 0.97
BRAF-201ENST00000288602 VSIG10LQ86VR7 867 aa21.08■□□□□ 0.97
BRAF-201ENST00000288602 KRT222Q8N1A0 295 aa21.08■□□□□ 0.97
BRAF-201ENST00000288602 DMAC2Q9NW81 257 aa21.08■□□□□ 0.97
BRAF-201ENST00000288602 DBR1Q9UK59 544 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms