RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 USP8P40818 1118 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 DHX9Q08211 1270 aaKnown RBP14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 BMT2Q1RMZ1 405 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 CABS1Q96KC9 395 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 TRIM51Q9BSJ1 452 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 TRIM31Q9BZY9 425 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 LRRC4CQ9HCJ2 640 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 AMFRQ9UKV5 643 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 INTUQ9ULD6 942 aa14.41□□□□□ -0.1
SLC28A1-201ENST00000286749 ATP8B3O60423 1300 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 FAM196BA6NMK8 535 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 SFI1A8K8P3 1242 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 FAM86B1E9PN63 330 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 BACH1O14867 736 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 TRAPPC3O43617 180 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 EVI5O60447 810 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 BUB1BO60566 1050 aaPredicted RBP14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 HLA-DOAP06340 250 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 FAM86B2P0C5J1 330 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 FERP16591 822 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 PPP2R2AP63151 447 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 AP3B2Q13367 1082 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 SWT1Q5T5J6 900 aaKnown RBP14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 AGBL2Q5U5Z8 902 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 MOXD1Q6UVY6 613 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 GLYCTKQ8IVS8 523 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 OLIG1Q8TAK6 271 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 GGA2Q9UJY4 613 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 NR2E1Q9Y466 385 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 BBOX1O75936 387 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 EEF2P13639 858 aaKnown RBP14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 STAT1P42224 750 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 NPEPPSP55786 919 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 MAGOHP61326 146 aaKnown RBP14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 ACTN3Q08043 901 aaPredicted RBP14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 QPCTQ16769 361 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 C6orf89Q6UWU4 347 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 MAGOHBQ96A72 148 aaKnown RBP14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 VCPKMTQ9H867 229 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 DDX20Q9UHI6 824 aaKnown RBP14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 UTP11Q9Y3A2 253 aaKnown RBP14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 LTBP1Q14766 1721 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 QSER1Q2KHR3 1735 aa14.4□□□□□ -0.1
SLC28A1-201ENST00000286749 F8VZ95 297 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 TGFB1I1O43294 461 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 TAL1P17542 331 aaPredicted RBP14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 ABCB4P21439 1286 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 POLD1P28340 1107 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 NFIAQ12857 509 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 KRT71Q3SY84 523 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 USH1GQ495M9 461 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 Q4G0T1 1027 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 SLFN13Q68D06 897 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 CDC42EP5Q6NZY7 148 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 ADAT2Q7Z6V5 191 aaKnown RBP14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 ZFPM1Q8IX07 1006 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 SLC30A5Q8TAD4 765 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 SLC35G2Q8TBE7 412 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 SEC14L1Q92503 715 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 FAM114A2Q9NRY5 505 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 PPP1R9AQ9ULJ8 1098 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 IGSF9BQ9UPX0 1349 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 GTPBP10A4D1E9 387 aaKnown RBP14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 TBX3O15119 743 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 SERPINB2P05120 415 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 PRPF4BQ13523 1007 aaKnown RBP14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 DCAF12L1Q5VU92 463 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 CCDC13Q8IYE1 715 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 FAM186BQ8IYM0 893 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 DNAJC18Q9H819 358 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 RGL1Q9NZL6 768 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 RABGAP1Q9Y3P9 1069 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 ZMYM2Q9UBW7 1377 aa14.39□□□□□ -0.11
SLC28A1-201ENST00000286749 MSH4O15457 936 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 COPB2P35606 906 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 SOX5P35711 763 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 POU5F1Q01860 360 aaKnown RBP14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 CYP2W1Q8TAV3 490 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 ATP8B4Q8TF62 1192 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 RAPGEF5Q92565 580 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 BORCS6Q96GS4 357 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 VAV3Q9UKW4 847 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 ATP8A1Q9Y2Q0 1164 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 NCANO14594 1321 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 SIPA1L1O43166 1804 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 SPDYE3A6NKU9 549 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 NMT1P30419 496 aaKnown RBP14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 DRAP1Q14919 205 aaPredicted RBP14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 ZC2HC1CQ53FD0 456 aaPredicted RBP14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 CCDC121Q6ZUS5 278 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 DCAF4Q8WV16 495 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 RFFLQ8WZ73 363 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 YY1AP1Q9H869 796 aa14.38□□□□□ -0.11
SLC28A1-201ENST00000286749 SMCHD1A6NHR9 2005 aa14.37□□□□□ -0.11
SLC28A1-201ENST00000286749 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.37□□□□□ -0.11
SLC28A1-201ENST00000286749 EML1O00423 815 aa14.37□□□□□ -0.11
SLC28A1-201ENST00000286749 DDX3YO15523 660 aaKnown RBP14.37□□□□□ -0.11
SLC28A1-201ENST00000286749 EYA4O95677 639 aa14.37□□□□□ -0.11
SLC28A1-201ENST00000286749 LMNB1P20700 586 aa14.37□□□□□ -0.11
SLC28A1-201ENST00000286749 IFFO1Q0D2I5 559 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms