RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PGK1P00558 417 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 F2P00734 622 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 ZNF131P52739 623 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 STK4Q13043 487 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 MAEAQ7L5Y9 396 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 DAW1Q8N136 415 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 MCPH1Q8NEM0 835 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 NAT10Q9H0A0 1025 aaKnown RBP20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 DHX33Q9H6R0 707 aaKnown RBP20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 ATP6V0A4Q9HBG4 840 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 PARVGQ9HBI0 331 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 MYADML2A6NDP7 307 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 ZBTB42B2RXF5 422 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 MSCO60682 206 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 KPNA6O60684 536 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 ADAMTS4O75173 837 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 GAP43P17677 238 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 RFC5P40937 340 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 POLGP54098 1239 aaPredicted RBP20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 MAPK7Q13164 816 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 GNASQ5JWF2 1037 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 SMYD4Q8IYR2 804 aaPredicted RBP20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 SH3TC2Q8TF17 1288 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 SLC7A3Q8WY07 619 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 KAT2BQ92831 832 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 HPS3Q969F9 1004 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 DACH1Q9UI36 760 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 GDAQ9Y2T3 454 aa20.95■□□□□ 0.94
PDLIM3-202ENST00000284770 HTTP42858 3142 aa20.94■□□□□ 0.94
PDLIM3-202ENST00000284770 SFI1A8K8P3 1242 aa20.94■□□□□ 0.94
PDLIM3-202ENST00000284770 MYL3P08590 195 aa20.94■□□□□ 0.94
PDLIM3-202ENST00000284770 FAM26FQ5R3K3 315 aa20.94■□□□□ 0.94
PDLIM3-202ENST00000284770 DHX40Q8IX18 779 aaKnown RBP20.94■□□□□ 0.94
PDLIM3-202ENST00000284770 EXOC8Q8IYI6 725 aa20.94■□□□□ 0.94
PDLIM3-202ENST00000284770 DRC1Q96MC2 740 aa20.94■□□□□ 0.94
PDLIM3-202ENST00000284770 SLC39A2Q9NP94 309 aa20.94■□□□□ 0.94
PDLIM3-202ENST00000284770 XPNPEP1Q9NQW7 623 aa20.94■□□□□ 0.94
PDLIM3-202ENST00000284770 PCDHA2Q9Y5H9 948 aa20.94■□□□□ 0.94
PDLIM3-202ENST00000284770 MAFO75444 373 aaPredicted RBP20.93■□□□□ 0.94
PDLIM3-202ENST00000284770 INSRRP14616 1297 aa20.93■□□□□ 0.94
PDLIM3-202ENST00000284770 PURAQ00577 322 aaKnown RBP20.93■□□□□ 0.94
PDLIM3-202ENST00000284770 TBC1D8BQ0IIM8 1120 aa20.93■□□□□ 0.94
PDLIM3-202ENST00000284770 EMC2Q15006 297 aa20.93■□□□□ 0.94
PDLIM3-202ENST00000284770 CT47A1Q5JQC4 288 aaPredicted RBP20.93■□□□□ 0.94
PDLIM3-202ENST00000284770 ZNF484Q5JVG2 852 aa20.93■□□□□ 0.94
PDLIM3-202ENST00000284770 FAM102BQ5T8I3 360 aa20.93■□□□□ 0.94
PDLIM3-202ENST00000284770 SFR1Q86XK3 245 aa20.93■□□□□ 0.94
PDLIM3-202ENST00000284770 MYCT1Q8N699 235 aa20.93■□□□□ 0.94
PDLIM3-202ENST00000284770 KIAA0895Q8NCT3 520 aa20.93■□□□□ 0.94
PDLIM3-202ENST00000284770 OLFML3Q9NRN5 406 aa20.93■□□□□ 0.94
PDLIM3-202ENST00000284770 SEL1LQ9UBV2 794 aa20.93■□□□□ 0.94
PDLIM3-202ENST00000284770 ARID2Q68CP9 1835 aa20.93■□□□□ 0.94
PDLIM3-202ENST00000284770 PPP1R3GB7ZBB8 358 aa20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 ZEB2O60315 1214 aa20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 CD44P16070 742 aaKnown RBP20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 CTCFP49711 727 aaPredicted RBP20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 COBLL1Q53SF7 1204 aa20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 KLHDC9Q8NEP7 349 aa20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 KIFAP3Q92845 792 aa20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 GPRC5CQ9NQ84 441 aa20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 LARSQ9P2J5 1176 aaKnown RBP20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 COL1A2P08123 1366 aa20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 HAS3O00219 553 aa20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 HSPA1AP0DMV8 641 aaKnown RBP20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 HSPA1BP0DMV9 641 aaKnown RBP20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 CST5P28325 142 aaPredicted RBP20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 PRCPP42785 496 aa20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 KIAA0753Q2KHM9 967 aa20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 SLC9C1Q4G0N8 1177 aa20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 CTU1Q7Z7A3 348 aaKnown RBP20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 KATNAL1Q9BW62 490 aa20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 TBC1D7Q9P0N9 293 aa20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 CENPFP49454 3210 aa20.92■□□□□ 0.94
PDLIM3-202ENST00000284770 IGKV6-21A0A0C4DH24 114 aa20.91■□□□□ 0.94
PDLIM3-202ENST00000284770 PLS3P13797 630 aa20.91■□□□□ 0.94
PDLIM3-202ENST00000284770 LBX1P52954 281 aa20.91■□□□□ 0.94
PDLIM3-202ENST00000284770 MFSD10Q14728 455 aa20.91■□□□□ 0.94
PDLIM3-202ENST00000284770 ODR4Q5SWX8 454 aa20.91■□□□□ 0.94
PDLIM3-202ENST00000284770 LHX8Q68G74 356 aa20.91■□□□□ 0.94
PDLIM3-202ENST00000284770 ADSSL1Q8N142 457 aa20.91■□□□□ 0.94
PDLIM3-202ENST00000284770 JPH2Q9BR39 696 aaPredicted RBP20.91■□□□□ 0.94
PDLIM3-202ENST00000284770 C17orf75Q9HAS0 396 aa20.91■□□□□ 0.94
PDLIM3-202ENST00000284770 MAPK8IP1Q9UQF2 711 aa20.91■□□□□ 0.94
PDLIM3-202ENST00000284770 GAS2O43903 313 aaKnown RBP20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 ERCC5P28715 1186 aaPredicted RBP20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 PPP1R2P41236 205 aa20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 PSEN2P49810 448 aa20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 SOX10P56693 466 aa20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 RTP1P59025 263 aa20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 PPFIA1Q13136 1202 aa20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 STIM1Q13586 685 aa20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 CCSAPQ6IQ19 270 aaPredicted RBP20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 AOPEPQ8N6M6 819 aa20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 TRAPPC12Q8WVT3 735 aa20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 MTG1Q9BT17 334 aaPredicted RBP20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 MRPL44Q9H9J2 332 aaKnown RBP20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 NCAPHQ15003 741 aa20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 RNF180Q86T96 592 aa20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 FAM178BQ8IXR5 827 aa20.9■□□□□ 0.94
PDLIM3-202ENST00000284770 PCSK9Q8NBP7 692 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms