RNA–Protein interactions for RNA: ENST00000282344.10

USP12-201, Transcript of ubiquitin specific peptidase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP12, Length 4,511 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-201ENST00000282344 CLEC11AQ9Y240 323 aa23.39■■□□□ 1.34
USP12-201ENST00000282344 SSX2IPQ9Y2D8 614 aa23.39■■□□□ 1.34
USP12-201ENST00000282344 TFAMQ00059 246 aaKnown RBP23.39■■□□□ 1.33
USP12-201ENST00000282344 RFX6Q8HWS3 928 aa23.39■■□□□ 1.33
USP12-201ENST00000282344 SRRM1Q8IYB3 904 aaKnown RBP23.39■■□□□ 1.33
USP12-201ENST00000282344 HNRNPLLQ8WVV9 542 aaKnown RBP23.39■■□□□ 1.33
USP12-201ENST00000282344 GOLPH3Q9H4A6 298 aa23.39■■□□□ 1.33
USP12-201ENST00000282344 C1orf167Q5SNV9 1468 aa23.39■■□□□ 1.33
USP12-201ENST00000282344 CLTCQ00610 1675 aaKnown RBP23.39■■□□□ 1.33
USP12-201ENST00000282344 PMS2P54278 862 aa23.39■■□□□ 1.33
USP12-201ENST00000282344 RPUSD2Q8IZ73 545 aaKnown RBP23.39■■□□□ 1.33
USP12-201ENST00000282344 ARHGEF1Q92888 912 aaKnown RBP23.39■■□□□ 1.33
USP12-201ENST00000282344 RGL1Q9NZL6 768 aa23.39■■□□□ 1.33
USP12-201ENST00000282344 PPP2R5CQ13362 524 aa23.38■■□□□ 1.33
USP12-201ENST00000282344 CFAP57Q96MR6 1250 aa23.38■■□□□ 1.33
USP12-201ENST00000282344 MROH2AA6NES4 1674 aa23.38■■□□□ 1.33
USP12-201ENST00000282344 POLD1P28340 1107 aa23.38■■□□□ 1.33
USP12-201ENST00000282344 SARNPP82979 210 aaKnown RBP23.38■■□□□ 1.33
USP12-201ENST00000282344 PADI6Q6TGC4 694 aa23.38■■□□□ 1.33
USP12-201ENST00000282344 LACRTQ9GZZ8 138 aa23.38■■□□□ 1.33
USP12-201ENST00000282344 TDRD3Q9H7E2 651 aaKnown RBP23.38■■□□□ 1.33
USP12-201ENST00000282344 SBK1Q52WX2 424 aa23.38■■□□□ 1.33
USP12-201ENST00000282344 L1RE1Q9UN81 338 aa23.38■■□□□ 1.33
USP12-201ENST00000282344 PDS5AQ29RF7 1337 aaKnown RBP23.38■■□□□ 1.33
USP12-201ENST00000282344 IRAK1P51617 712 aa23.38■■□□□ 1.33
USP12-201ENST00000282344 LRRC14Q15048 493 aa23.38■■□□□ 1.33
USP12-201ENST00000282344 GBP5Q96PP8 586 aa23.38■■□□□ 1.33
USP12-201ENST00000282344 PITPNM3Q9BZ71 974 aa23.38■■□□□ 1.33
USP12-201ENST00000282344 STXBP3O00186 592 aa23.37■■□□□ 1.33
USP12-201ENST00000282344 PPP4R1Q8TF05 950 aa23.37■■□□□ 1.33
USP12-201ENST00000282344 MSH2P43246 934 aa23.37■■□□□ 1.33
USP12-201ENST00000282344 CRKP46108 304 aa23.37■■□□□ 1.33
USP12-201ENST00000282344 PAXIP1Q6ZW49 1069 aaPredicted RBP23.37■■□□□ 1.33
USP12-201ENST00000282344 SLC17A8Q8NDX2 589 aa23.37■■□□□ 1.33
USP12-201ENST00000282344 OR2W6PQ8NHA6 318 aa23.37■■□□□ 1.33
USP12-201ENST00000282344 HESX1Q9UBX0 185 aa23.37■■□□□ 1.33
USP12-201ENST00000282344 INO80B-WBP1J3KQ70 363 aa23.37■■□□□ 1.33
USP12-201ENST00000282344 ZRANB2O95218 330 aaKnown RBP eCLIP23.37■■□□□ 1.331e-6■■■■■ 30
USP12-201ENST00000282344 NMT1P30419 496 aaKnown RBP23.37■■□□□ 1.33
USP12-201ENST00000282344 INO80BQ9C086 356 aaPredicted RBP23.37■■□□□ 1.33
USP12-201ENST00000282344 TECPR2O15040 1411 aa23.37■■□□□ 1.33
USP12-201ENST00000282344 KLRC1P26715 233 aa23.36■■□□□ 1.33
USP12-201ENST00000282344 ZNF394Q53GI3 561 aa23.36■■□□□ 1.33
USP12-201ENST00000282344 DCAF4Q8WV16 495 aa23.36■■□□□ 1.33
USP12-201ENST00000282344 RNPC3Q96LT9 517 aaKnown RBP23.36■■□□□ 1.33
USP12-201ENST00000282344 TRIM65Q6PJ69 517 aa23.36■■□□□ 1.33
USP12-201ENST00000282344 RFFLQ8WZ73 363 aa23.36■■□□□ 1.33
USP12-201ENST00000282344 HVCN1Q96D96 273 aa23.36■■□□□ 1.33
USP12-201ENST00000282344 PABPN1LA6NDY0 278 aaKnown RBP23.36■■□□□ 1.33
USP12-201ENST00000282344 CAMTA2O94983 1202 aa23.36■■□□□ 1.33
USP12-201ENST00000282344 PPP1R18Q6NYC8 613 aa23.36■■□□□ 1.33
USP12-201ENST00000282344 TTI1O43156 1089 aa23.36■■□□□ 1.33
USP12-201ENST00000282344 SLC9A1P19634 815 aa23.36■■□□□ 1.33
USP12-201ENST00000282344 DDX42Q86XP3 938 aaKnown RBP eCLIP23.36■■□□□ 1.33
USP12-201ENST00000282344 SLITRK6Q9H5Y7 841 aa23.36■■□□□ 1.33
USP12-201ENST00000282344 NRBP2Q9NSY0 501 aa23.36■■□□□ 1.33
USP12-201ENST00000282344 IVNS1ABPQ9Y6Y0 642 aa23.36■■□□□ 1.33
USP12-201ENST00000282344 FRMPD1Q5SYB0 1578 aa23.35■■□□□ 1.33
USP12-201ENST00000282344 EIF3HO15372 352 aaKnown RBP eCLIP23.35■■□□□ 1.33
USP12-201ENST00000282344 UCHL3P15374 230 aa23.35■■□□□ 1.33
USP12-201ENST00000282344 IGBP1P78318 339 aa23.35■■□□□ 1.33
USP12-201ENST00000282344 FBXW10Q5XX13 1052 aa23.35■■□□□ 1.33
USP12-201ENST00000282344 PDCD7Q8N8D1 485 aaKnown RBP23.35■■□□□ 1.33
USP12-201ENST00000282344 MTMR4Q9NYA4 1195 aa23.35■■□□□ 1.33
USP12-201ENST00000282344 TTC7AQ9ULT0 858 aaPredicted RBP23.35■■□□□ 1.33
USP12-201ENST00000282344 DIS3Q9Y2L1 958 aaKnown RBP23.35■■□□□ 1.33
USP12-201ENST00000282344 SLC16A4O15374 487 aa23.35■■□□□ 1.33
USP12-201ENST00000282344 MT-ND3P03897 115 aa23.35■■□□□ 1.33
USP12-201ENST00000282344 OSTNP61366 133 aa23.35■■□□□ 1.33
USP12-201ENST00000282344 PPP2R5AQ15172 486 aa23.35■■□□□ 1.33
USP12-201ENST00000282344 SF3B3Q15393 1217 aaKnown RBP23.35■■□□□ 1.33
USP12-201ENST00000282344 PASD1Q8IV76 773 aa23.35■■□□□ 1.33
USP12-201ENST00000282344 ADAM22Q9P0K1 906 aa23.35■■□□□ 1.33
USP12-201ENST00000282344 ZNF233A6NK53 670 aa23.35■■□□□ 1.33
USP12-201ENST00000282344 INTS2Q9H0H0 1204 aaKnown RBP23.35■■□□□ 1.33
USP12-201ENST00000282344 SAYSD1Q9NPB0 183 aa23.35■■□□□ 1.33
USP12-201ENST00000282344 ZNF18P17022 549 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 RASA1P20936 1047 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 PRELPP51888 382 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 GPSM2P81274 684 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 RCSD1Q6JBY9 416 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 RNF207Q6ZRF8 634 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 ZIM3Q96PE6 472 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 CCT8L2Q96SF2 557 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 SYNJ2BP-COX16A0A087WUM0 186 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 RASA4BC9J798 803 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 RASA4O43374 803 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 TFRCP02786 760 aaKnown RBP23.34■■□□□ 1.33
USP12-201ENST00000282344 SAT1P21673 171 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 SEC24CP53992 1094 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 CCDC137Q6PK04 289 aaKnown RBP23.34■■□□□ 1.33
USP12-201ENST00000282344 MAP7D3Q8IWC1 876 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 PSD3Q9NYI0 1048 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 COX16Q9P0S2 106 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 PLAGL2Q9UPG8 496 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 TPD52P55327 224 aaPredicted RBP23.34■■□□□ 1.33
USP12-201ENST00000282344 PDE1BQ01064 536 aa23.34■■□□□ 1.33
USP12-201ENST00000282344 NKX1-1Q15270 411 aaPredicted RBP23.34■■□□□ 1.33
USP12-201ENST00000282344 ZNF564Q8TBZ8 553 aaPredicted RBP23.34■■□□□ 1.33
USP12-201ENST00000282344 EIF2AK1Q9BQI3 630 aaKnown RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms