RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 NR3C1P04150 777 aa24.3■■□□□ 1.48
CCDC7-201ENST00000277657 RPL13P26373 211 aaKnown RBP24.3■■□□□ 1.48
CCDC7-201ENST00000277657 PRKCEQ02156 737 aa24.3■■□□□ 1.48
CCDC7-201ENST00000277657 ALCAMQ13740 583 aa24.3■■□□□ 1.48
CCDC7-201ENST00000277657 WDR78Q5VTH9 848 aa24.3■■□□□ 1.48
CCDC7-201ENST00000277657 MAEAQ7L5Y9 396 aa24.3■■□□□ 1.48
CCDC7-201ENST00000277657 SIK3Q9Y2K2 1263 aa24.3■■□□□ 1.48
CCDC7-201ENST00000277657 MAFBQ9Y5Q3 323 aaPredicted RBP24.3■■□□□ 1.48
CCDC7-201ENST00000277657 MYH9P35579 1960 aaKnown RBP24.29■■□□□ 1.48
CCDC7-201ENST00000277657 SORBS3O60504 671 aa24.29■■□□□ 1.48
CCDC7-201ENST00000277657 KRT9P35527 623 aa24.29■■□□□ 1.48
CCDC7-201ENST00000277657 KCNV1Q6PIU1 500 aa24.29■■□□□ 1.48
CCDC7-201ENST00000277657 FRMD5Q7Z6J6 570 aa24.29■■□□□ 1.48
CCDC7-201ENST00000277657 ZNF526Q8TF50 670 aaPredicted RBP24.29■■□□□ 1.48
CCDC7-201ENST00000277657 ST6GALNAC4Q9H4F1 302 aa24.29■■□□□ 1.48
CCDC7-201ENST00000277657 XKR3Q5GH77 459 aa24.28■■□□□ 1.48
CCDC7-201ENST00000277657 ANKRD13CQ8N6S4 541 aa24.28■■□□□ 1.48
CCDC7-201ENST00000277657 IQCDQ96DY2 449 aa24.28■■□□□ 1.48
CCDC7-201ENST00000277657 CEP170P1Q96L14 293 aa24.28■■□□□ 1.48
CCDC7-201ENST00000277657 PDLIM7Q9NR12 457 aa24.28■■□□□ 1.48
CCDC7-201ENST00000277657 TRMT1Q9NXH9 659 aaKnown RBP24.28■■□□□ 1.48
CCDC7-201ENST00000277657 FAM184BQ9ULE4 1060 aa24.28■■□□□ 1.48
CCDC7-201ENST00000277657 SLC16A3O15427 465 aaKnown RBP24.28■■□□□ 1.48
CCDC7-201ENST00000277657 KLK7P49862 253 aa24.28■■□□□ 1.48
CCDC7-201ENST00000277657 DNTTIP2Q5QJE6 756 aaKnown RBP24.28■■□□□ 1.48
CCDC7-201ENST00000277657 NYAP1Q6ZVC0 841 aa24.28■■□□□ 1.48
CCDC7-201ENST00000277657 TRMT1LQ7Z2T5 733 aaKnown RBP24.28■■□□□ 1.48
CCDC7-201ENST00000277657 DNAJC7Q99615 494 aa24.28■■□□□ 1.48
CCDC7-201ENST00000277657 PTPN18Q99952 460 aa24.28■■□□□ 1.48
CCDC7-201ENST00000277657 LUC7L2Q9Y383 392 aaKnown RBP24.28■■□□□ 1.48
CCDC7-201ENST00000277657 TRPM7Q96QT4 1865 aa24.27■■□□□ 1.48
CCDC7-201ENST00000277657 A0A1W2PQJ5 194 aa24.27■■□□□ 1.48
CCDC7-201ENST00000277657 K7ENM7 598 aa24.27■■□□□ 1.48
CCDC7-201ENST00000277657 METTL7BQ6UX53 244 aa24.27■■□□□ 1.48
CCDC7-201ENST00000277657 EEPD1Q7L9B9 569 aa24.27■■□□□ 1.48
CCDC7-201ENST00000277657 KSR1Q8IVT5 923 aa24.27■■□□□ 1.48
CCDC7-201ENST00000277657 PPP1R13BQ96KQ4 1090 aa24.27■■□□□ 1.48
CCDC7-201ENST00000277657 GBP3Q9H0R5 595 aa24.27■■□□□ 1.48
CCDC7-201ENST00000277657 GPRC5CQ9NQ84 441 aa24.27■■□□□ 1.48
CCDC7-201ENST00000277657 ZNF302Q9NR11 478 aa24.27■■□□□ 1.48
CCDC7-201ENST00000277657 DDX41Q9UJV9 622 aaKnown RBP24.27■■□□□ 1.48
CCDC7-201ENST00000277657 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.27■■□□□ 1.48
CCDC7-201ENST00000277657 GSTTP1A0A1W2PQM5 241 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 CCP110O43303 1012 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 AKAP3O75969 853 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 TRIM21P19474 475 aaKnown RBP24.26■■□□□ 1.47
CCDC7-201ENST00000277657 ATP4AP20648 1035 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 SLC17A8Q8NDX2 589 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 GOLGA5Q8TBA6 731 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 C16orf45Q96MC5 204 aaPredicted RBP24.26■■□□□ 1.47
CCDC7-201ENST00000277657 IKZF4Q9H2S9 585 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 CYP26B1Q9NR63 512 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 PLXNB2O15031 1838 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 DGAT1O75907 488 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 NCKAP1LP55160 1127 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 FAM102BQ5T8I3 360 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 CHADLQ6NUI6 762 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 HS2ST1Q7LGA3 356 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 ABRAQ8N0Z2 381 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 OR8K1Q8NGG5 319 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 AGPAT3Q9NRZ7 376 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 DMAC2Q9NW81 257 aa24.26■■□□□ 1.47
CCDC7-201ENST00000277657 ARMCX3Q9UH62 379 aaPredicted RBP24.26■■□□□ 1.47
CCDC7-201ENST00000277657 SEPT9Q9UHD8 586 aaPredicted RBP24.26■■□□□ 1.47
CCDC7-201ENST00000277657 MCM3APO60318 1980 aa24.25■■□□□ 1.47
CCDC7-201ENST00000277657 ASB14A6NK59 587 aa24.25■■□□□ 1.47
CCDC7-201ENST00000277657 CLIC2O15247 247 aa24.25■■□□□ 1.47
CCDC7-201ENST00000277657 ARIH2O95376 493 aa24.25■■□□□ 1.47
CCDC7-201ENST00000277657 GGPS1O95749 300 aa24.25■■□□□ 1.47
CCDC7-201ENST00000277657 GTF2BQ00403 316 aa24.25■■□□□ 1.47
CCDC7-201ENST00000277657 PPP2R3AQ06190 1150 aa24.25■■□□□ 1.47
CCDC7-201ENST00000277657 LY6KQ17RY6 165 aa24.25■■□□□ 1.47
CCDC7-201ENST00000277657 ZNF792Q3KQV3 632 aa24.25■■□□□ 1.47
CCDC7-201ENST00000277657 TMTC1Q8IUR5 882 aa24.25■■□□□ 1.47
CCDC7-201ENST00000277657 TMEM174Q8WUU8 243 aa24.25■■□□□ 1.47
CCDC7-201ENST00000277657 KIFAP3Q92845 792 aa24.25■■□□□ 1.47
CCDC7-201ENST00000277657 PARK7Q99497 189 aaKnown RBP24.25■■□□□ 1.47
CCDC7-201ENST00000277657 TMEM206Q9H813 350 aa24.25■■□□□ 1.47
CCDC7-201ENST00000277657 C17orf75Q9HAS0 396 aa24.25■■□□□ 1.47
CCDC7-201ENST00000277657 METTL14Q9HCE5 456 aaKnown RBP24.25■■□□□ 1.47
CCDC7-201ENST00000277657 SOWAHDA6NJG2 315 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 MCPH1Q8NEM0 835 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 PCMTD1Q96MG8 357 aaPredicted RBP24.24■■□□□ 1.47
CCDC7-201ENST00000277657 PCYT2Q99447 389 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 PLXNA1Q9UIW2 1896 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 STRNO43815 780 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 OATP04181 439 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 EPB41P11171 864 aaKnown RBP24.24■■□□□ 1.47
CCDC7-201ENST00000277657 CASP4P49662 377 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 PEX3P56589 373 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 HUNKP57058 714 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 ZBED6P86452 979 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 CCDC62Q6P9F0 684 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 RAD9BQ6WBX8 426 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 TOGARAM2Q6ZUX3 1019 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 HAUS6Q7Z4H7 955 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 SLC9A9Q8IVB4 645 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 AFAP1L1Q8TED9 768 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 BORCS6Q96GS4 357 aa24.24■■□□□ 1.47
CCDC7-201ENST00000277657 NTPCRQ9BSD7 190 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms