RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 DRAP1Q14919 205 aaPredicted RBP15.53■□□□□ 0.08
TMEM47-201ENST00000275954 PDXDC1Q6P996 788 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 HHIPL2Q6UWX4 724 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 DNAAF5Q86Y56 855 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 ANKS4BQ8N8V4 417 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 SPATA4Q8NEY3 305 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 ATP6V0A1Q93050 837 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 AKAP12Q02952 1782 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 RSPH10B2B2RC85 870 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 RGS16O15492 202 aaPredicted RBP15.53■□□□□ 0.08
TMEM47-201ENST00000275954 RSPH10BP0C881 870 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 LIG3P49916 1009 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 DHX9Q08211 1270 aaKnown RBP15.53■□□□□ 0.08
TMEM47-201ENST00000275954 TRIP13Q15645 432 aaPredicted RBP15.53■□□□□ 0.08
TMEM47-201ENST00000275954 CDKAL1Q5VV42 579 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 SLC7A3Q8WY07 619 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 TYW1Q9NV66 732 aaKnown RBP15.53■□□□□ 0.08
TMEM47-201ENST00000275954 DAAM1Q9Y4D1 1078 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 N4BP1O75113 896 aaKnown RBP15.53■□□□□ 0.08
TMEM47-201ENST00000275954 ADCY8P40145 1251 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 MDM2Q00987 491 aaPredicted RBP15.53■□□□□ 0.08
TMEM47-201ENST00000275954 ZNF394Q53GI3 561 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 IQCGQ9H095 443 aaKnown RBP15.53■□□□□ 0.08
TMEM47-201ENST00000275954 SAMD15Q9P1V8 674 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 SUGT1Q9Y2Z0 365 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 GGCXP38435 758 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 NSFP46459 744 aaKnown RBP15.53■□□□□ 0.08
TMEM47-201ENST00000275954 PTK2Q05397 1052 aa15.53■□□□□ 0.08
TMEM47-201ENST00000275954 TTC31Q49AM3 519 aaPredicted RBP15.53■□□□□ 0.08
TMEM47-201ENST00000275954 STMN4Q9H169 189 aaPredicted RBP15.53■□□□□ 0.08
TMEM47-201ENST00000275954 ITIH6Q6UXX5 1313 aa15.52■□□□□ 0.08
TMEM47-201ENST00000275954 INO80B-WBP1J3KQ70 363 aa15.52■□□□□ 0.08
TMEM47-201ENST00000275954 GAS8O95995 478 aa15.52■□□□□ 0.08
TMEM47-201ENST00000275954 USP14P54578 494 aa15.52■□□□□ 0.08
TMEM47-201ENST00000275954 CATSPER3Q86XQ3 398 aa15.52■□□□□ 0.08
TMEM47-201ENST00000275954 CYP2W1Q8TAV3 490 aa15.52■□□□□ 0.08
TMEM47-201ENST00000275954 INO80BQ9C086 356 aaPredicted RBP15.52■□□□□ 0.08
TMEM47-201ENST00000275954 SEMA6BQ9H3T3 888 aa15.52■□□□□ 0.08
TMEM47-201ENST00000275954 TBC1D8O95759 1140 aa15.52■□□□□ 0.07
TMEM47-201ENST00000275954 CD58P19256 250 aa15.52■□□□□ 0.07
TMEM47-201ENST00000275954 HOXA10P31260 410 aaPredicted RBP15.52■□□□□ 0.07
TMEM47-201ENST00000275954 PIK3CAP42336 1068 aa15.52■□□□□ 0.07
TMEM47-201ENST00000275954 CCDC91Q7Z6B0 441 aa15.52■□□□□ 0.07
TMEM47-201ENST00000275954 NSRP1Q9H0G5 558 aaKnown RBP15.52■□□□□ 0.07
TMEM47-201ENST00000275954 NYAP2Q9P242 653 aa15.52■□□□□ 0.07
TMEM47-201ENST00000275954 MFAP3P55082 362 aa15.52■□□□□ 0.07
TMEM47-201ENST00000275954 ILDR2Q71H61 639 aa15.52■□□□□ 0.07
TMEM47-201ENST00000275954 ZBTB33Q86T24 672 aa15.52■□□□□ 0.07
TMEM47-201ENST00000275954 PPP1R14CQ8TAE6 165 aa15.52■□□□□ 0.07
TMEM47-201ENST00000275954 MAK16Q9BXY0 300 aaKnown RBP15.52■□□□□ 0.07
TMEM47-201ENST00000275954 TMEM206Q9H813 350 aa15.52■□□□□ 0.07
TMEM47-201ENST00000275954 NKIRAS1Q9NYS0 192 aa15.52■□□□□ 0.07
TMEM47-201ENST00000275954 MKRN1Q9UHC7 482 aaKnown RBP15.52■□□□□ 0.07
TMEM47-201ENST00000275954 PCDHB4Q9Y5E5 795 aa15.52■□□□□ 0.07
TMEM47-201ENST00000275954 ANO9A1A5B4 782 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 APBA1Q02410 837 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
TMEM47-201ENST00000275954 APOBEC3HQ6NTF7 200 aaKnown RBP15.51■□□□□ 0.07
TMEM47-201ENST00000275954 TRIM65Q6PJ69 517 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 ELOA2Q8IYF1 753 aaPredicted RBP15.51■□□□□ 0.07
TMEM47-201ENST00000275954 CHORDC1Q9UHD1 332 aaPredicted RBP15.51■□□□□ 0.07
TMEM47-201ENST00000275954 YDJCA8MPS7 323 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 SRGAP2CP0DJJ0 459 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 ZBTB16Q05516 673 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 NNTQ13423 1086 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 GJB7Q6PEY0 223 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 PRPF38AQ8NAV1 312 aaKnown RBP15.51■□□□□ 0.07
TMEM47-201ENST00000275954 NXF1Q9UBU9 619 aaKnown RBP15.51■□□□□ 0.07
TMEM47-201ENST00000275954 FHOD1Q9Y613 1164 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 MED24O75448 989 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 ORC2Q13416 577 aaPredicted RBP15.51■□□□□ 0.07
TMEM47-201ENST00000275954 LMBRD2Q68DH5 695 aaPredicted RBP15.51■□□□□ 0.07
TMEM47-201ENST00000275954 B4GALNT4Q76KP1 1039 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 CYFIP1Q7L576 1253 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 PPP1R13LQ8WUF5 828 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 AGBL1Q96MI9 1066 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 RNF146Q9NTX7 359 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 SNX12Q9UMY4 172 aa15.51■□□□□ 0.07
TMEM47-201ENST00000275954 HIP1RO75146 1068 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 MAPK4P31152 587 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 TFAMQ00059 246 aaKnown RBP15.5■□□□□ 0.07
TMEM47-201ENST00000275954 XXYLT1Q8NBI6 393 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 COG1Q8WTW3 980 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 FAM151AQ8WW52 585 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 SNX24Q9Y343 169 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 KRT15P19012 456 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 SSTR3P32745 418 aaPredicted RBP15.5■□□□□ 0.07
TMEM47-201ENST00000275954 MTMR3Q13615 1198 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 GLIS3Q8NEA6 775 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 EXOC4Q96A65 974 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 CD2APQ9Y5K6 639 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 GOLGA8KD6RF30 607 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 GOLGA8SH3BPF8 625 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 UCHL3P15374 230 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 FXR2P51116 673 aaKnown RBP eCLIP15.5■□□□□ 0.07
TMEM47-201ENST00000275954 PDCLQ13371 301 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 IL17AQ16552 155 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 KCNK18Q7Z418 384 aa15.5■□□□□ 0.07
TMEM47-201ENST00000275954 APOBEC3FQ8IUX4 373 aaKnown RBP15.5■□□□□ 0.07
TMEM47-201ENST00000275954 PNKPQ96T60 521 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms