RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 TMEM192Q8IY95 271 aa16.25■□□□□ 0.19
HMGN3-201ENST00000275036 DIS3L2Q8IYB7 885 aaKnown RBP16.25■□□□□ 0.19
HMGN3-201ENST00000275036 ERVK-5Q9HDB9 667 aa16.25■□□□□ 0.19
HMGN3-201ENST00000275036 LMCD1Q9NZU5 365 aa16.25■□□□□ 0.19
HMGN3-201ENST00000275036 GINS2Q9Y248 185 aa16.25■□□□□ 0.19
HMGN3-201ENST00000275036 NOC2LQ9Y3T9 749 aaKnown RBP16.25■□□□□ 0.19
HMGN3-201ENST00000275036 TCF20Q9UGU0 1960 aaKnown RBP16.24■□□□□ 0.19
HMGN3-201ENST00000275036 GPR32O75388 356 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 DGKIO75912 1065 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 VTNP04004 478 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 BMP1P13497 986 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 GUCY1B3Q02153 619 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 PAK2Q13177 524 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 PPP2R5CQ13362 524 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 TARBP2Q15633 366 aaKnown RBP16.24■□□□□ 0.19
HMGN3-201ENST00000275036 KIZQ2M2Z5 673 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 LRRC71Q8N4P6 559 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 METTL13Q8N6R0 699 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 BANK1Q8NDB2 785 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 ADAMTS19Q8TE59 1207 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 SYMPKQ92797 1274 aaKnown RBP16.24■□□□□ 0.19
HMGN3-201ENST00000275036 FAM20AQ96MK3 541 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 NECAB3Q96P71 396 aaPredicted RBP16.24■□□□□ 0.19
HMGN3-201ENST00000275036 CEP89Q96ST8 783 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 OSMRQ99650 979 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 SH2D3AQ9BRG2 576 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 TSPYL2Q9H2G4 693 aaPredicted RBP16.24■□□□□ 0.19
HMGN3-201ENST00000275036 BRMS1Q9HCU9 246 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 CEP131Q9UPN4 1083 aa16.24■□□□□ 0.19
HMGN3-201ENST00000275036 FNDC1Q4ZHG4 1894 aaPredicted RBP16.24■□□□□ 0.19
HMGN3-201ENST00000275036 H3BNC9 293 aa16.23■□□□□ 0.19
HMGN3-201ENST00000275036 GATMP50440 423 aa16.23■□□□□ 0.19
HMGN3-201ENST00000275036 SPIRE1Q08AE8 756 aa16.23■□□□□ 0.19
HMGN3-201ENST00000275036 EFCAB12Q6NXP0 572 aa16.23■□□□□ 0.19
HMGN3-201ENST00000275036 FIBCD1Q8N539 461 aa16.23■□□□□ 0.19
HMGN3-201ENST00000275036 LLPHQ9BRT6 129 aaKnown RBP16.23■□□□□ 0.19
HMGN3-201ENST00000275036 NRBP2Q9NSY0 501 aa16.23■□□□□ 0.19
HMGN3-201ENST00000275036 TBX3O15119 743 aa16.22■□□□□ 0.19
HMGN3-201ENST00000275036 MAGEB2O15479 319 aa16.22■□□□□ 0.19
HMGN3-201ENST00000275036 NFX1Q12986 1120 aaKnown RBP16.22■□□□□ 0.19
HMGN3-201ENST00000275036 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
HMGN3-201ENST00000275036 GPM6BQ13491 265 aa16.22■□□□□ 0.19
HMGN3-201ENST00000275036 MTERF2Q49AM1 385 aa16.22■□□□□ 0.19
HMGN3-201ENST00000275036 XKR3Q5GH77 459 aa16.22■□□□□ 0.19
HMGN3-201ENST00000275036 FAM228AQ86W67 206 aa16.22■□□□□ 0.19
HMGN3-201ENST00000275036 CLP1Q92989 425 aaKnown RBP16.22■□□□□ 0.19
HMGN3-201ENST00000275036 ZNF668Q96K58 619 aaPredicted RBP16.22■□□□□ 0.19
HMGN3-201ENST00000275036 ZSCAN31Q96LW9 406 aaPredicted RBP16.22■□□□□ 0.19
HMGN3-201ENST00000275036 SAMD11Q96NU1 681 aa16.22■□□□□ 0.19
HMGN3-201ENST00000275036 NAP1L4Q99733 375 aaKnown RBP16.22■□□□□ 0.19
HMGN3-201ENST00000275036 FTHL17Q9BXU8 183 aa16.22■□□□□ 0.19
HMGN3-201ENST00000275036 NIFKQ9BYG3 293 aaKnown RBP16.22■□□□□ 0.19
HMGN3-201ENST00000275036 WRAP73Q9P2S5 460 aaPredicted RBP16.22■□□□□ 0.19
HMGN3-201ENST00000275036 SEPT9Q9UHD8 586 aaPredicted RBP16.22■□□□□ 0.19
HMGN3-201ENST00000275036 C5orf67F2Z3F1 127 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 RPS6KA5O75582 802 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 CTNNB1P35222 781 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 BMPR1AP36894 532 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 CRYBB1P53674 252 aaPredicted RBP16.21■□□□□ 0.19
HMGN3-201ENST00000275036 PSMC5P62195 406 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 DRP2Q13474 957 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 TRIM29Q14134 588 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 BTG3Q14201 252 aaPredicted RBP16.21■□□□□ 0.19
HMGN3-201ENST00000275036 ANO5Q75V66 913 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 NPAS4Q8IUM7 802 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 HLA-CQ95604 372 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 MRPL38Q96DV4 380 aaKnown RBP16.21■□□□□ 0.19
HMGN3-201ENST00000275036 ADAMTS10Q9H324 1103 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 SH2B1Q9NRF2 756 aaPredicted RBP16.21■□□□□ 0.19
HMGN3-201ENST00000275036 ST3GAL5Q9UNP4 418 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 COG5Q9UP83 839 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 AKT3Q9Y243 479 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 MRPL42Q9Y6G3 142 aaKnown RBP16.21■□□□□ 0.19
HMGN3-201ENST00000275036 BDP1A6H8Y1 2624 aa16.21■□□□□ 0.19
HMGN3-201ENST00000275036 NCOR1O75376 2440 aa16.2■□□□□ 0.18
HMGN3-201ENST00000275036 DDX11L8A8MPP1 907 aa16.2■□□□□ 0.18
HMGN3-201ENST00000275036 GRM6O15303 877 aa16.2■□□□□ 0.18
HMGN3-201ENST00000275036 CD2BP2O95400 341 aaKnown RBP16.2■□□□□ 0.18
HMGN3-201ENST00000275036 IBSPP21815 317 aaPredicted RBP16.2■□□□□ 0.18
HMGN3-201ENST00000275036 NLRP11P59045 1033 aaKnown RBP16.2■□□□□ 0.18
HMGN3-201ENST00000275036 TBC1D8BQ0IIM8 1120 aa16.2■□□□□ 0.18
HMGN3-201ENST00000275036 RABEP1Q15276 862 aa16.2■□□□□ 0.18
HMGN3-201ENST00000275036 PAN2Q504Q3 1202 aaKnown RBP16.2■□□□□ 0.18
HMGN3-201ENST00000275036 PLA2G4FQ68DD2 849 aa16.2■□□□□ 0.18
HMGN3-201ENST00000275036 C8orf76Q96K31 380 aa16.2■□□□□ 0.18
HMGN3-201ENST00000275036 UHRF1Q96T88 793 aaPredicted RBP16.2■□□□□ 0.18
HMGN3-201ENST00000275036 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.19■□□□□ 0.18
HMGN3-201ENST00000275036 IGKV6-21A0A0C4DH24 114 aa16.19■□□□□ 0.18
HMGN3-201ENST00000275036 C9IYK1 514 aa16.19■□□□□ 0.18
HMGN3-201ENST00000275036 TNFRSF10AO00220 468 aa16.19■□□□□ 0.18
HMGN3-201ENST00000275036 QARSP47897 775 aaKnown RBP16.19■□□□□ 0.18
HMGN3-201ENST00000275036 GPC3P51654 580 aa16.19■□□□□ 0.18
HMGN3-201ENST00000275036 DSC3Q14574 896 aa16.19■□□□□ 0.18
HMGN3-201ENST00000275036 NCAPH2Q6IBW4 605 aa16.19■□□□□ 0.18
HMGN3-201ENST00000275036 CMTR2Q8IYT2 770 aaKnown RBP16.19■□□□□ 0.18
HMGN3-201ENST00000275036 ZNF579Q8NAF0 562 aaKnown RBP16.19■□□□□ 0.18
HMGN3-201ENST00000275036 MAP7D2Q96T17 732 aa16.19■□□□□ 0.18
HMGN3-201ENST00000275036 ADAM2Q99965 735 aa16.19■□□□□ 0.18
HMGN3-201ENST00000275036 RGS18Q9NS28 235 aa16.19■□□□□ 0.18
HMGN3-201ENST00000275036 RGL1Q9NZL6 768 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms