RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 PLA2G6O60733 806 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 EYA4O95677 639 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 GOLGA6DP0CG33 693 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 XRCC5P13010 732 aaKnown RBP11.03□□□□□ -0.64
CPNE9-201ENST00000273027 FERP16591 822 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 ARHGAP4P98171 946 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 KCNH2Q12809 1159 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 PICALMQ13492 652 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 ALCAMQ13740 583 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 ARHGEF6Q15052 776 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 QRICH1Q2TAL8 776 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 SPDYCQ5MJ68 293 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 SLFN13Q68D06 897 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 EPM2AIP1Q7L775 607 aaPredicted RBP11.03□□□□□ -0.64
CPNE9-201ENST00000273027 SAMD3Q8N6K7 520 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 ETNPPLQ8TBG4 499 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 NEK9Q8TD19 979 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 DPF3Q92784 378 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 PTPN18Q99952 460 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 LSM14BQ9BX40 385 aaKnown RBP11.03□□□□□ -0.64
CPNE9-201ENST00000273027 TLR10Q9BXR5 811 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 GANQ9H2C0 597 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 CPVLQ9H3G5 476 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 FAM204AQ9H8W3 233 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 GDF3Q9NR23 364 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 GOLGA6AQ9NYA3 693 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 SERPINA10Q9UK55 444 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 PTCH2Q9Y6C5 1203 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 CAPN6Q9Y6Q1 641 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 USP17L10C9JJH3 530 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 PDE2AO00408 941 aaPredicted RBP11.02□□□□□ -0.65
CPNE9-201ENST00000273027 MPHOSPH10O00566 681 aaKnown RBP11.02□□□□□ -0.65
CPNE9-201ENST00000273027 MEIS2O14770 477 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 ZEB2O60315 1214 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 PPP1R11O60927 126 aaPredicted RBP11.02□□□□□ -0.65
CPNE9-201ENST00000273027 SRGAP2O75044 1071 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 NOL4O94818 638 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 NR2F2P24468 414 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 CRKP46108 304 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 NAP1L1P55209 391 aaKnown RBP11.02□□□□□ -0.65
CPNE9-201ENST00000273027 POLR2FP61218 127 aaKnown RBP11.02□□□□□ -0.65
CPNE9-201ENST00000273027 SKOR1P84550 965 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 CUL1Q13616 776 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 GIT2Q14161 759 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 DLGAP5Q15398 846 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 UBE2SQ16763 222 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 EXOC3L4Q17RC7 722 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 SUPT20HL1Q3ZLR7 823 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 APOBEC3HQ6NTF7 200 aaKnown RBP11.02□□□□□ -0.65
CPNE9-201ENST00000273027 KCNK18Q7Z418 384 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 ACTRT1Q8TDG2 376 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 TMEM174Q8WUU8 243 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 SCFD1Q8WVM8 642 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 SPAG5Q96R06 1193 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 NUDT12Q9BQG2 462 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 DDX4Q9NQI0 724 aaKnown RBP11.02□□□□□ -0.65
CPNE9-201ENST00000273027 HERC5Q9UII4 1024 aaKnown RBP11.02□□□□□ -0.65
CPNE9-201ENST00000273027 ODF2LQ9ULJ1 636 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 DUSP10Q9Y6W6 482 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 SIPA1L1O43166 1804 aa11.02□□□□□ -0.65
CPNE9-201ENST00000273027 RBBP6Q7Z6E9 1792 aaKnown RBP11.01□□□□□ -0.65
CPNE9-201ENST00000273027 E9PMD0 336 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 EPHB6O15197 1021 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 TBCAO75347 108 aaKnown RBP11.01□□□□□ -0.65
CPNE9-201ENST00000273027 SSBP05455 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
CPNE9-201ENST00000273027 PLEKP08567 350 aaPredicted RBP11.01□□□□□ -0.65
CPNE9-201ENST00000273027 EEF2P13639 858 aaKnown RBP11.01□□□□□ -0.65
CPNE9-201ENST00000273027 GJA5P36382 358 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 SNRPFP62306 86 aaKnown RBP11.01□□□□□ -0.65
CPNE9-201ENST00000273027 SPIRE1Q08AE8 756 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 C2orf54Q08AI8 447 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 MTMR3Q13615 1198 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 RAPGEF1Q13905 1077 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 PPP2R5AQ15172 486 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 KIAA0753Q2KHM9 967 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 DNAJC21Q5F1R6 531 aaKnown RBP11.01□□□□□ -0.65
CPNE9-201ENST00000273027 SYDE2Q5VT97 1194 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 LRIG3Q6UXM1 1119 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 SRLQ86TD4 932 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 ARFGAP2Q8N6H7 521 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 SH3TC2Q8TF17 1288 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 LRRC45Q96CN5 670 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 ZBED3Q96IU2 234 aaPredicted RBP11.01□□□□□ -0.65
CPNE9-201ENST00000273027 NAP1L3Q99457 506 aaPredicted RBP11.01□□□□□ -0.65
CPNE9-201ENST00000273027 LRRC1Q9BTT6 524 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 WDR11Q9BZH6 1224 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 TMEM59LQ9UK28 342 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 PNMA2Q9UL42 364 aa11.01□□□□□ -0.65
CPNE9-201ENST00000273027 TTC7AQ9ULT0 858 aaPredicted RBP11.01□□□□□ -0.65
CPNE9-201ENST00000273027 ATXN2Q99700 1313 aaKnown RBP11.01□□□□□ -0.65
CPNE9-201ENST00000273027 RANBP2P49792 3224 aaKnown RBP11.01□□□□□ -0.65
CPNE9-201ENST00000273027 POTEB3A0JP26 581 aa11□□□□□ -0.65
CPNE9-201ENST00000273027 ZNF185O15231 689 aa11□□□□□ -0.65
CPNE9-201ENST00000273027 USP2O75604 605 aaPredicted RBP11□□□□□ -0.65
CPNE9-201ENST00000273027 MAPTP10636 758 aaKnown RBP11□□□□□ -0.65
CPNE9-201ENST00000273027 BMP3P12645 472 aa11□□□□□ -0.65
CPNE9-201ENST00000273027 PSMC2P35998 433 aaKnown RBP11□□□□□ -0.65
CPNE9-201ENST00000273027 GGCXP38435 758 aa11□□□□□ -0.65
CPNE9-201ENST00000273027 STAT1P42224 750 aa11□□□□□ -0.65
CPNE9-201ENST00000273027 IREB2P48200 963 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms