RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 TCEAL9Q9UHQ7 104 aa13.36□□□□□ -0.27
SDE2-201ENST00000272091 CLIC2O15247 247 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 AKAP3O75969 853 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 NR3C1P04150 777 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 KCNMA1Q12791 1236 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 TRIM14Q14142 442 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 BORCS6Q96GS4 357 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 XPNPEP1Q9NQW7 623 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 NFIL3Q16649 462 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 MIS18BP1Q6P0N0 1132 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 GTF3C2Q8WUA4 911 aaPredicted RBP13.35□□□□□ -0.27
SDE2-201ENST00000272091 ATP6V0A1Q93050 837 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 AGPAT5Q9NUQ2 364 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 CAPN11Q9UMQ6 739 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 ZNF236Q9UL36 1845 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 ARHGAP6O43182 974 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 CALUO43852 315 aaPredicted RBP13.35□□□□□ -0.27
SDE2-201ENST00000272091 ZNF792Q3KQV3 632 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 REXO1L1PQ8IX06 675 aa13.35□□□□□ -0.27
SDE2-201ENST00000272091 FBXO16Q8IX29 292 aaPredicted RBP13.35□□□□□ -0.27
SDE2-201ENST00000272091 SMCR8Q8TEV9 937 aaPredicted RBP13.35□□□□□ -0.27
SDE2-201ENST00000272091 DDX41Q9UJV9 622 aaKnown RBP13.35□□□□□ -0.27
SDE2-201ENST00000272091 NCKAP1LP55160 1127 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 CCDC40Q4G0X9 1142 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.34□□□□□ -0.27
SDE2-201ENST00000272091 CNGA4Q8IV77 575 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 C16orf45Q96MC5 204 aaPredicted RBP13.34□□□□□ -0.27
SDE2-201ENST00000272091 DNAJC7Q99615 494 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 DMAC2Q9NW81 257 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 MAPTP10636 758 aaKnown RBP13.34□□□□□ -0.27
SDE2-201ENST00000272091 WDR78Q5VTH9 848 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 CCDC62Q6P9F0 684 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 WDR59Q6PJI9 974 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 TISP43B9A030 160 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 K7ENM7 598 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 GNA14O95837 355 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 DPY19L2P1Q6NXN4 242 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 RASAL3Q86YV0 1011 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 CCDC51Q96ER9 411 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 CEP170P1Q96L14 293 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 TIPINQ9BVW5 301 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 CYP26B1Q9NR63 512 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 PDGFCQ9NRA1 345 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 SEPT9Q9UHD8 586 aaPredicted RBP13.34□□□□□ -0.27
SDE2-201ENST00000272091 ADGRA2Q96PE1 1338 aa13.34□□□□□ -0.27
SDE2-201ENST00000272091 CETN3O15182 167 aa13.33□□□□□ -0.27
SDE2-201ENST00000272091 GGPS1O95749 300 aa13.33□□□□□ -0.27
SDE2-201ENST00000272091 ZNF302Q9NR11 478 aa13.33□□□□□ -0.27
SDE2-201ENST00000272091 AGPAT3Q9NRZ7 376 aa13.33□□□□□ -0.27
SDE2-201ENST00000272091 TGFB3P10600 412 aa13.33□□□□□ -0.28
SDE2-201ENST00000272091 KRT9P35527 623 aa13.33□□□□□ -0.28
SDE2-201ENST00000272091 FAM102BQ5T8I3 360 aa13.33□□□□□ -0.28
SDE2-201ENST00000272091 ST6GALNAC4Q9H4F1 302 aa13.33□□□□□ -0.28
SDE2-201ENST00000272091 ADGRA3Q8IWK6 1321 aa13.33□□□□□ -0.28
SDE2-201ENST00000272091 A0A0U1RQJ8 604 aa13.33□□□□□ -0.28
SDE2-201ENST00000272091 TPM2P07951 284 aa13.33□□□□□ -0.28
SDE2-201ENST00000272091 ADORA2AP29274 412 aa13.33□□□□□ -0.28
SDE2-201ENST00000272091 GTF2BQ00403 316 aa13.33□□□□□ -0.28
SDE2-201ENST00000272091 FIGNQ5HY92 759 aa13.33□□□□□ -0.28
SDE2-201ENST00000272091 CHADLQ6NUI6 762 aa13.33□□□□□ -0.28
SDE2-201ENST00000272091 FRMD5Q7Z6J6 570 aa13.33□□□□□ -0.28
SDE2-201ENST00000272091 ATRIPQ8WXE1 791 aa13.33□□□□□ -0.28
SDE2-201ENST00000272091 COPS5Q92905 334 aa13.33□□□□□ -0.28
SDE2-201ENST00000272091 PEX3P56589 373 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 APBA1Q02410 837 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 FKBP15Q5T1M5 1219 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 METTL7BQ6UX53 244 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 MAMDC4Q6UXC1 1216 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 DRC1Q96MC2 740 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 DESI2Q9BSY9 194 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 KIFC3Q9BVG8 833 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 PCDHB13Q9Y5F0 798 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 A0A1W2PQJ5 194 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 SLC16A4O15374 487 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 SLC16A3O15427 465 aaKnown RBP13.32□□□□□ -0.28
SDE2-201ENST00000272091 NOL4O94818 638 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 OATP04181 439 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 HUNKP57058 714 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 NEDD9Q14511 834 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 XKR3Q5GH77 459 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 OTUD6AQ7L8S5 288 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 AFAP1L1Q8TED9 768 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 CHP1Q99653 195 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 NAA15Q9BXJ9 866 aaKnown RBP13.32□□□□□ -0.28
SDE2-201ENST00000272091 KATNBL1Q9H079 304 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 LARSQ9P2J5 1176 aaKnown RBP13.32□□□□□ -0.28
SDE2-201ENST00000272091 PPP2R2CQ9Y2T4 447 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 IGF2BP3O00425 579 aaKnown RBP eCLIP13.32□□□□□ -0.28
SDE2-201ENST00000272091 NPTX2P47972 431 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 GCLCP48506 637 aaPredicted RBP13.32□□□□□ -0.28
SDE2-201ENST00000272091 HSDL1Q3SXM5 330 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 CELF3Q5SZQ8 465 aaKnown RBP13.32□□□□□ -0.28
SDE2-201ENST00000272091 ARMCX2Q7L311 632 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 HAUS6Q7Z4H7 955 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 TMEM161BQ8NDZ6 487 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 ZSWIM2Q8NEG5 633 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 GPR20Q99678 358 aa13.32□□□□□ -0.28
SDE2-201ENST00000272091 TCF7P36402 384 aaPredicted RBP13.31□□□□□ -0.28
SDE2-201ENST00000272091 CCDC43Q96MW1 224 aaKnown RBP13.31□□□□□ -0.28
SDE2-201ENST00000272091 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms