RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 EPHB4P54760 987 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 C3orf67Q6ZVT6 689 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 FAM213AQ9BRX8 229 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 TRIM9Q9C026 710 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 JMJD4Q9H9V9 463 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 LRFN2Q9ULH4 789 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 HPS5Q9UPZ3 1129 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 C19orf81C9J6K1 198 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 ZNF131P52739 623 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 ZNF394Q53GI3 561 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 SDCCAG8Q86SQ7 713 aaPredicted RBP16.63■□□□□ 0.25
TIMP3-201ENST00000266085 METTL23Q86XA0 190 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 CCDC13Q8IYE1 715 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 AGBL3Q8NEM8 1001 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 FAM71BQ8TC56 605 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 CNTNAP5Q8WYK1 1306 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 STXBP3O00186 592 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 ZNF667Q5HYK9 610 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 RHOT2Q8IXI1 618 aa16.63■□□□□ 0.25
TIMP3-201ENST00000266085 GMNNO75496 209 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 CIB2O75838 187 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 RFX6Q8HWS3 928 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 MCUR1Q96AQ8 359 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 LRRC4Q9HBW1 653 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 PDE11AQ9HCR9 933 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 SGK1O00141 431 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 NAALADL2Q58DX5 795 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 SPATA33Q96N06 139 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 MTRQ99707 1265 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 RASSF4Q9H2L5 321 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 SEPT10Q9P0V9 454 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 MAD1L1Q9Y6D9 718 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 PPP2R5CQ13362 524 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 ZNF568Q3ZCX4 644 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 PDS5AQ29RF7 1337 aaKnown RBP16.62■□□□□ 0.25
TIMP3-201ENST00000266085 EIF3CLB5ME19 914 aaKnown RBP16.62■□□□□ 0.25
TIMP3-201ENST00000266085 TEX33O43247 280 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 ATP8B1O43520 1251 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 PHKA2P46019 1235 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 PLTPP55058 493 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 OR6B2Q6IFH4 312 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 RHPN2Q8IUC4 686 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 EIF3CQ99613 913 aaKnown RBP16.62■□□□□ 0.25
TIMP3-201ENST00000266085 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.62■□□□□ 0.25
TIMP3-201ENST00000266085 SLC9A2Q9UBY0 812 aa16.62■□□□□ 0.25
TIMP3-201ENST00000266085 ECEL1O95672 775 aa16.61■□□□□ 0.25
TIMP3-201ENST00000266085 EYA4O95677 639 aa16.61■□□□□ 0.25
TIMP3-201ENST00000266085 RPS12P25398 132 aaKnown RBP16.61■□□□□ 0.25
TIMP3-201ENST00000266085 KCNB1Q14721 858 aa16.61■□□□□ 0.25
TIMP3-201ENST00000266085 KIAA1841Q6NSI8 718 aa16.61■□□□□ 0.25
TIMP3-201ENST00000266085 HEXIM2Q96MH2 286 aaKnown RBP16.61■□□□□ 0.25
TIMP3-201ENST00000266085 CALN1Q9BXU9 219 aa16.61■□□□□ 0.25
TIMP3-201ENST00000266085 TROVE2P10155 538 aaKnown RBP eCLIP16.61■□□□□ 0.25
TIMP3-201ENST00000266085 CYFIP1Q7L576 1253 aa16.61■□□□□ 0.25
TIMP3-201ENST00000266085 HPS3Q969F9 1004 aa16.61■□□□□ 0.25
TIMP3-201ENST00000266085 MROH1Q8NDA8 1641 aa16.61■□□□□ 0.25
TIMP3-201ENST00000266085 ARHGEF37A1IGU5 675 aa16.61■□□□□ 0.25
TIMP3-201ENST00000266085 GKAP1Q5VSY0 366 aaPredicted RBP16.61■□□□□ 0.25
TIMP3-201ENST00000266085 HAUS6Q7Z4H7 955 aa16.61■□□□□ 0.25
TIMP3-201ENST00000266085 PNMA8AQ86V59 439 aaPredicted RBP16.61■□□□□ 0.25
TIMP3-201ENST00000266085 MAP3K14Q99558 947 aa16.61■□□□□ 0.25
TIMP3-201ENST00000266085 ZMYND12Q9H0C1 365 aa16.61■□□□□ 0.25
TIMP3-201ENST00000266085 JPH1Q9HDC5 661 aaPredicted RBP16.61■□□□□ 0.25
TIMP3-201ENST00000266085 TNS2Q63HR2 1409 aa16.61■□□□□ 0.25
TIMP3-201ENST00000266085 LRRD1A4D1F6 860 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 LRRC53A6NM62 1247 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 NR3C2P08235 984 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 COPB2P35606 906 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 GSDMBQ8TAX9 411 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 KRT1P04264 644 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 YWHAGP61981 247 aaKnown RBP eCLIP16.6■□□□□ 0.25
TIMP3-201ENST00000266085 ATP11AP98196 1134 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 SNX1Q13596 522 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 BCAS4Q8TDM0 211 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 CAPS2Q9BXY5 557 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 ITKQ08881 620 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 ZSCAN26Q16670 478 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 HACL1Q9UJ83 578 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 GNAT1P11488 350 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 C2orf54Q08AI8 447 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 TWF2Q6IBS0 349 aaKnown RBP16.6■□□□□ 0.25
TIMP3-201ENST00000266085 ARMCX2Q7L311 632 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 SAAL1Q96ER3 474 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 PDLIM2Q96JY6 352 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 RILPQ96NA2 401 aa16.6■□□□□ 0.25
TIMP3-201ENST00000266085 POLR3FQ9H1D9 316 aaPredicted RBP16.6■□□□□ 0.25
TIMP3-201ENST00000266085 TOPORSQ9NS56 1045 aaPredicted RBP16.6■□□□□ 0.25
TIMP3-201ENST00000266085 HIP1RO75146 1068 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 OATP04181 439 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 TXNP10599 105 aaKnown RBP16.59■□□□□ 0.25
TIMP3-201ENST00000266085 ARL4AP40617 200 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 ARHGAP24Q8N264 748 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 OR6B3Q8NGW1 331 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 CDKL2Q92772 493 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 TMEM60Q9H2L4 133 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 SLC38A10Q9HBR0 1119 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 FBXO28Q9NVF7 368 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 SALL3Q9BXA9 1300 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 TTC26A0AVF1 554 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 ASB14A6NK59 587 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms