RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 ZCWPW2Q504Y3 356 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 KRT39Q6A163 491 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 IRGCQ6NXR0 463 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 ADAT2Q7Z6V5 191 aaKnown RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 NLRX1Q86UT6 975 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 PEX5LQ8IYB4 626 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 MYCBPAPQ8TBZ2 947 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 EHD2Q9NZN4 543 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 PARP3Q9Y6F1 533 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 CDC42BPGQ6DT37 1551 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 KLRF2D3W0D1 207 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 SCNN1BP51168 640 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 TRAPPC3LQ5T215 181 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 PDZD8Q8NEN9 1154 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 TRIM63Q969Q1 353 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 LRCH1Q9Y2L9 728 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 ORC6Q9Y5N6 252 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 UNC13BO14795 1591 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 LGALS16A8MUM7 142 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 MFAP3LO75121 409 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 USP4Q13107 963 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 KCTD17Q8N5Z5 321 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 DACT3Q96B18 629 aaPredicted RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 RBM41Q96IZ5 413 aaKnown RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 TTC25Q96NG3 672 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 DNAAF2Q9NVR5 837 aaKnown RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 NFU1Q9UMS0 254 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 GSPT2Q8IYD1 628 aaKnown RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 PSTPIP2Q9H939 334 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 CIDEBQ9UHD4 219 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 JAG2Q9Y219 1238 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 HNRNPRO43390 633 aaKnown RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 SRGAP2BP0DMP2 458 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 RBL2Q08999 1139 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 LRRC37BQ96QE4 947 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 HINFPQ9BQA5 517 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 MYL10Q9BUA6 226 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.1□□□□□ -1.432e-7■■■■■ 28.3
VCAN-201ENST00000265077 ADGRL3Q9HAR2 1447 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 TBKBP1A7MCY6 615 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 POLR2FP61218 127 aaKnown RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 MED21Q13503 144 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 MCF2L2Q86YR7 1114 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 RNF34Q969K3 372 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 PLEKHF1Q96S99 279 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 CYTH2Q99418 400 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 RANBP17Q9H2T7 1088 aaKnown RBP6.1□□□□□ -1.43
VCAN-201ENST00000265077 NDUFB9Q9Y6M9 179 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 BRWD1Q9NSI6 2320 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 NEO1Q92859 1461 aa6.1□□□□□ -1.43
VCAN-201ENST00000265077 GYG2O15488 501 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 MYBL1P10243 752 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 SERPINB1P30740 379 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 MAGOHP61326 146 aaKnown RBP6.09□□□□□ -1.43
VCAN-201ENST00000265077 GABPAQ06546 454 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 SPARCL1Q14515 664 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 GPATCH4Q5T3I0 446 aaKnown RBP6.09□□□□□ -1.43
VCAN-201ENST00000265077 ZBTB38Q8NAP3 1195 aaPredicted RBP6.09□□□□□ -1.43
VCAN-201ENST00000265077 NDNQ99608 321 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 MID2Q9UJV3 735 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 AFDNP55196 1824 aaKnown RBP6.09□□□□□ -1.43
VCAN-201ENST00000265077 CBFA2T3O75081 653 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 NQO1P15559 274 aaKnown RBP6.09□□□□□ -1.43
VCAN-201ENST00000265077 MPP3Q13368 585 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 TNIP2Q8NFZ5 429 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 LARP4BQ92615 738 aaKnown RBP6.09□□□□□ -1.43
VCAN-201ENST00000265077 NHEJ1Q9H9Q4 299 aaPredicted RBP6.09□□□□□ -1.43
VCAN-201ENST00000265077 ZDHHC9Q9Y397 364 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 DLG5Q8TDM6 1919 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 BTBD18B2RXH4 712 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 PYGBP11216 843 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 ALOX15P16050 662 aaPredicted RBP6.09□□□□□ -1.43
VCAN-201ENST00000265077 RAB27AP51159 221 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 ART3Q13508 389 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 R3HDM1Q15032 1099 aaKnown RBP6.09□□□□□ -1.43
VCAN-201ENST00000265077 TCP11X2Q5H9J9 407 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 ZBTB8OSQ8IWT0 167 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 KIFC3Q9BVG8 833 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 DPH5Q9H2P9 285 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 OLFML3Q9NRN5 406 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 ATAD3AQ9NVI7 634 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 SPATA7Q9P0W8 599 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 AFG3L2Q9Y4W6 797 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 CEBPAP49715 358 aaPredicted RBP6.09□□□□□ -1.43
VCAN-201ENST00000265077 FAAH2Q6GMR7 532 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 PLEKHG4BQ96PX9 1271 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.09□□□□□ -1.43
VCAN-201ENST00000265077 POTEB3A0JP26 581 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 SOWAHDA6NJG2 315 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 ZBED4O75132 1171 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 APOA1P02647 267 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 POLA2Q14181 598 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 TAF12Q16514 161 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 POTEBQ6S5H4 581 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 PROM2Q8N271 834 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 PITPNM3Q9BZ71 974 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 SPC25Q9HBM1 224 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 SEL1LQ9UBV2 794 aa6.09□□□□□ -1.43
VCAN-201ENST00000265077 MRPL11Q9Y3B7 192 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms