RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 FBXO38Q6PIJ6 1188 aa15.07■□□□□ 0
CDH3-201ENST00000264012 NYAP2Q9P242 653 aa15.07■□□□□ 0
CDH3-201ENST00000264012 AFG3L2Q9Y4W6 797 aa15.07■□□□□ 0
CDH3-201ENST00000264012 ARL4AP40617 200 aa15.07■□□□□ 0
CDH3-201ENST00000264012 INTS5Q6P9B9 1019 aaKnown RBP15.07■□□□□ 0
CDH3-201ENST00000264012 KCTD6Q8NC69 237 aa15.07■□□□□ 0
CDH3-201ENST00000264012 CCNYQ8ND76 341 aa15.07■□□□□ 0
CDH3-201ENST00000264012 GSDMBQ8TAX9 411 aa15.07■□□□□ 0
CDH3-201ENST00000264012 ABCB6Q9NP58 842 aa15.07■□□□□ 0
CDH3-201ENST00000264012 ZNF302Q9NR11 478 aa15.07■□□□□ 0
CDH3-201ENST00000264012 EPHA7Q15375 998 aa15.07■□□□□ 0
CDH3-201ENST00000264012 ZNF394Q53GI3 561 aa15.07■□□□□ 0
CDH3-201ENST00000264012 SCINQ9Y6U3 715 aa15.07■□□□□ 0
CDH3-201ENST00000264012 A0A1W2PQC6 194 aa15.06■□□□□ 0
CDH3-201ENST00000264012 ANO9A1A5B4 782 aa15.06■□□□□ 0
CDH3-201ENST00000264012 PRPSAP2O60256 369 aa15.06■□□□□ 0
CDH3-201ENST00000264012 ENTPD3O75355 529 aa15.06■□□□□ 0
CDH3-201ENST00000264012 PCK1P35558 622 aa15.06■□□□□ 0
CDH3-201ENST00000264012 WHAMMQ8TF30 809 aa15.06■□□□□ 0
CDH3-201ENST00000264012 PSPC1Q8WXF1 523 aaKnown RBP15.06■□□□□ 0
CDH3-201ENST00000264012 ADAM22Q9P0K1 906 aa15.06■□□□□ 0
CDH3-201ENST00000264012 RFX1P22670 979 aa15.06■□□□□ 0
CDH3-201ENST00000264012 VAMP7P51809 220 aa15.06■□□□□ 0
CDH3-201ENST00000264012 CASP8Q14790 479 aa15.06■□□□□ 0
CDH3-201ENST00000264012 TRIP13Q15645 432 aaPredicted RBP15.06■□□□□ 0
CDH3-201ENST00000264012 ANKRD40Q6AI12 368 aa15.06■□□□□ 0
CDH3-201ENST00000264012 RPAP3Q9H6T3 665 aaPredicted RBP15.06■□□□□ 0
CDH3-201ENST00000264012 CNOT8Q9UFF9 292 aaKnown RBP15.06■□□□□ 0
CDH3-201ENST00000264012 BAIAP2L1Q9UHR4 511 aa15.06■□□□□ 0
CDH3-201ENST00000264012 CCDC188H7C350 402 aa15.06■□□□□ 0
CDH3-201ENST00000264012 SRGAP2O75044 1071 aa15.06■□□□□ 0
CDH3-201ENST00000264012 EYA4O95677 639 aa15.06■□□□□ 0
CDH3-201ENST00000264012 USP49Q70CQ1 688 aa15.06■□□□□ 0
CDH3-201ENST00000264012 LRRC8CQ8TDW0 803 aa15.06■□□□□ 0
CDH3-201ENST00000264012 FMO2Q99518 471 aa15.06■□□□□ 0
CDH3-201ENST00000264012 RGL1Q9NZL6 768 aa15.06■□□□□ 0
CDH3-201ENST00000264012 PDHBP11177 359 aa15.06■□□□□ 0
CDH3-201ENST00000264012 SAT1P21673 171 aa15.06■□□□□ 0
CDH3-201ENST00000264012 HMGCS2P54868 508 aa15.06■□□□□ 0
CDH3-201ENST00000264012 BASP1P80723 227 aaKnown RBP15.06■□□□□ 0
CDH3-201ENST00000264012 IQCB1Q15051 598 aa15.06■□□□□ 0
CDH3-201ENST00000264012 SPATS2Q86XZ4 545 aaKnown RBP15.06■□□□□ 0
CDH3-201ENST00000264012 DPF2Q92785 391 aa15.06■□□□□ 0
CDH3-201ENST00000264012 OTUD5Q96G74 571 aa15.06■□□□□ 0
CDH3-201ENST00000264012 MTRQ99707 1265 aa15.06■□□□□ 0
CDH3-201ENST00000264012 HPS5Q9UPZ3 1129 aa15.06■□□□□ 0
CDH3-201ENST00000264012 PDS5AQ29RF7 1337 aaKnown RBP15.06■□□□□ 0
CDH3-201ENST00000264012 USP27XA6NNY8 438 aa15.05■□□□□ 0
CDH3-201ENST00000264012 MRPS25P82663 173 aaKnown RBP15.05■□□□□ 0
CDH3-201ENST00000264012 PDE1BQ01064 536 aa15.05■□□□□ 0
CDH3-201ENST00000264012 RNASELQ05823 741 aaKnown RBP15.05■□□□□ 0
CDH3-201ENST00000264012 CERKQ8TCT0 537 aa15.05■□□□□ 0
CDH3-201ENST00000264012 ACTN1P12814 892 aa15.05■□□□□ 0
CDH3-201ENST00000264012 SLMAPQ14BN4 828 aa15.05■□□□□ 0
CDH3-201ENST00000264012 ARHGEF6Q15052 776 aa15.05■□□□□ 0
CDH3-201ENST00000264012 DARS2Q6PI48 645 aaKnown RBP15.05■□□□□ 0
CDH3-201ENST00000264012 RNF181Q9P0P0 153 aa15.05■□□□□ 0
CDH3-201ENST00000264012 ANAPC7Q9UJX3 599 aa15.05■□□□□ 0
CDH3-201ENST00000264012 MEGF6O75095 1541 aa15.05■□□□□ -0
CDH3-201ENST00000264012 SIX6OS1Q8N1H7 587 aa15.05■□□□□ -0
CDH3-201ENST00000264012 CCHCR1Q8TD31 782 aa15.05■□□□□ -0
CDH3-201ENST00000264012 HPS3Q969F9 1004 aa15.05■□□□□ -0
CDH3-201ENST00000264012 SPATA31D1Q6ZQQ2 1576 aa15.05■□□□□ -0
CDH3-201ENST00000264012 CNTNAP5Q8WYK1 1306 aa15.05■□□□□ -0
CDH3-201ENST00000264012 GPR75-ASB3A0A0A6YYF3 556 aa15.05■□□□□ -0
CDH3-201ENST00000264012 MIF4GDA9UHW6 222 aaKnown RBP15.05■□□□□ -0
CDH3-201ENST00000264012 STXBP3O00186 592 aa15.05■□□□□ -0
CDH3-201ENST00000264012 CCT5P48643 541 aa15.05■□□□□ -0
CDH3-201ENST00000264012 NFX1Q12986 1120 aaKnown RBP15.05■□□□□ -0
CDH3-201ENST00000264012 PRPSAP1Q14558 356 aa15.05■□□□□ -0
CDH3-201ENST00000264012 DRAP1Q14919 205 aaPredicted RBP15.05■□□□□ -0
CDH3-201ENST00000264012 ZNF568Q3ZCX4 644 aa15.05■□□□□ -0
CDH3-201ENST00000264012 ARMCX2Q7L311 632 aa15.05■□□□□ -0
CDH3-201ENST00000264012 STK38LQ9Y2H1 464 aa15.05■□□□□ -0
CDH3-201ENST00000264012 PCDHA10Q9Y5I2 948 aa15.05■□□□□ -0
CDH3-201ENST00000264012 PHKA2P46019 1235 aa15.04■□□□□ -0
CDH3-201ENST00000264012 IL9RQ01113 521 aa15.04■□□□□ -0
CDH3-201ENST00000264012 FMR1Q06787 632 aaKnown RBP eCLIP15.04■□□□□ -0
CDH3-201ENST00000264012 TMEM270Q6UE05 265 aa15.04■□□□□ -0
CDH3-201ENST00000264012 TMEM35BQ8NCS4 154 aa15.04■□□□□ -0
CDH3-201ENST00000264012 NFU1Q9UMS0 254 aa15.04■□□□□ -0
CDH3-201ENST00000264012 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
CDH3-201ENST00000264012 CAPN7Q9Y6W3 813 aa15.04■□□□□ -0
CDH3-201ENST00000264012 TRIM49P0CI25 452 aa15.04■□□□□ -0
CDH3-201ENST00000264012 TRIM49CP0CI26 452 aa15.04■□□□□ -0
CDH3-201ENST00000264012 KLRK1P26718 216 aa15.04■□□□□ -0
CDH3-201ENST00000264012 GARSP41250 739 aaKnown RBP15.04■□□□□ -0
CDH3-201ENST00000264012 SLCO1A2P46721 670 aa15.04■□□□□ -0
CDH3-201ENST00000264012 GPC5P78333 572 aa15.04■□□□□ -0
CDH3-201ENST00000264012 ADCY1Q08828 1119 aa15.04■□□□□ -0
CDH3-201ENST00000264012 DPYDQ12882 1025 aa15.04■□□□□ -0
CDH3-201ENST00000264012 NAA25Q14CX7 972 aa15.04■□□□□ -0
CDH3-201ENST00000264012 EMBQ6PCB8 327 aa15.04■□□□□ -0
CDH3-201ENST00000264012 RPUSD2Q8IZ73 545 aaKnown RBP15.04■□□□□ -0
CDH3-201ENST00000264012 C2orf69Q8N8R5 385 aa15.04■□□□□ -0
CDH3-201ENST00000264012 OR6B3Q8NGW1 331 aa15.04■□□□□ -0
CDH3-201ENST00000264012 SCYL1Q96KG9 808 aa15.04■□□□□ -0
CDH3-201ENST00000264012 HIP1RO75146 1068 aa15.04■□□□□ -0
CDH3-201ENST00000264012 MTMR2Q13614 643 aa15.04■□□□□ -0
CDH3-201ENST00000264012 PSMD6Q15008 389 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms