RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 FGFBP2Q9BYJ0 223 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 TUT1Q9H6E5 874 aaKnown RBP10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 SLC39A2Q9NP94 309 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 NRBP2Q9NSY0 501 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 PANK4Q9NVE7 773 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 MAPK8IP1Q9UQF2 711 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 TRPC6Q9Y210 931 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 Q9Y3F1 56 aa10.82□□□□□ -0.68
SNRNP40-201ENST00000263694 TRIP12Q14669 1992 aaPredicted RBP10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 RBAK-RBAKDNI3L0D1 243 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 HIP1RO75146 1068 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 MYL1P05976 194 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 GJA9P57773 515 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 IGBP1P78318 339 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 STK4Q13043 487 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 COASYQ13057 564 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 MAPK7Q13164 816 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 LRRC41Q15345 812 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 MTFR1Q15390 333 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 STX1AQ16623 288 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 GNASQ5JWF2 1037 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 CNNM4Q6P4Q7 775 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 BBXQ8WY36 941 aaPredicted RBP10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 ANP32EQ9BTT0 268 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 NIFKQ9BYG3 293 aaKnown RBP10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 LRRC27Q9C0I9 530 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 UNC93B1Q9H1C4 597 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 UPF3AQ9H1J1 476 aaKnown RBP10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 XPNPEP3Q9NQH7 507 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 XPNPEP1Q9NQW7 623 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 EXOC1Q9NV70 894 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 ERAP1Q9NZ08 941 aa10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 DDX20Q9UHI6 824 aaKnown RBP10.81□□□□□ -0.68
SNRNP40-201ENST00000263694 PVALEFA0A1B0GWK0 134 aa10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 ADAMTS4O75173 837 aa10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 RHOBTB3O94955 611 aa10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 INSRRP14616 1297 aa10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 CPT1AP50416 773 aa10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 ATN1P54259 1190 aaPredicted RBP10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 PURAQ00577 322 aaKnown RBP10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 TARBP2Q15633 366 aaKnown RBP10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 HERC4Q5GLZ8 1057 aaPredicted RBP10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 FAM102BQ5T8I3 360 aa10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 LCE2DQ5TA82 110 aaPredicted RBP10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 SFR1Q86XK3 245 aa10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 RNF214Q8ND24 703 aa10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 TMEM143Q96AN5 459 aa10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 RBSNQ9H1K0 784 aa10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 HMX1Q9NP08 348 aaPredicted RBP10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 PDLIM7Q9NR12 457 aa10.8□□□□□ -0.68
SNRNP40-201ENST00000263694 FRMD3A2A2Y4 597 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 PPP1R3GB7ZBB8 358 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 HBP1O60381 514 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 TBCAO75347 108 aaKnown RBP10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 FAM13AO94988 1023 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 GUCY2CP25092 1073 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 PRCPP42785 496 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 PSEN2P49810 448 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 POLGP54098 1239 aaPredicted RBP10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 EHHADHQ08426 723 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 DRP2Q13474 957 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 HIC1Q14526 733 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 KCNB1Q14721 858 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 MFSD10Q14728 455 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 EMC2Q15006 297 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 KCNA10Q16322 511 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 KIAA0753Q2KHM9 967 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 SLC9C1Q4G0N8 1177 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 ZNF658Q5TYW1 1059 aaPredicted RBP10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 CXCL17Q6UXB2 119 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 CTU1Q7Z7A3 348 aaKnown RBP10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 CCDC65Q8IXS2 484 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 LRRC71Q8N4P6 559 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 MYCT1Q8N699 235 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 KIAA0895Q8NCT3 520 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 BSNDQ8WZ55 320 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 FAM167AQ96KS9 214 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 TSPYL2Q9H2G4 693 aaPredicted RBP10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 SETD4Q9NVD3 440 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 ANO10Q9NW15 660 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 PCDHA2Q9Y5H9 948 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 FRMPD3Q5JV73 1810 aa10.79□□□□□ -0.68
SNRNP40-201ENST00000263694 DGAT1O75907 488 aa10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 NMT1P30419 496 aaKnown RBP10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 CTCFP49711 727 aaPredicted RBP10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 SLC26A2P50443 739 aa10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 CASP5P51878 434 aa10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 STX17P56962 302 aa10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 ZNF200P98182 395 aaPredicted RBP10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 TBC1D8BQ0IIM8 1120 aa10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 BRDTQ58F21 947 aaPredicted RBP10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 KLHL10Q6JEL2 608 aa10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 KSR1Q8IVT5 923 aa10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 TRIML1Q8N9V2 468 aa10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 KLHDC9Q8NEP7 349 aa10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 MED15Q96RN5 788 aa10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 DHX33Q9H6R0 707 aaKnown RBP10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 SUGCTQ9HAC7 445 aa10.78□□□□□ -0.68
SNRNP40-201ENST00000263694 ATP6V0A4Q9HBG4 840 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms