RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 K7ENM7 598 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 DKC1O60832 514 aaKnown RBP eCLIP17.38■□□□□ 0.37
VPS26A-201ENST00000263559 COPB2P35606 906 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 ERVK-9P63128 1117 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 TSR1Q2NL82 804 aaKnown RBP17.38■□□□□ 0.37
VPS26A-201ENST00000263559 MIS18BP1Q6P0N0 1132 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 MS4A4AQ96JQ5 239 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 FGD4Q96M96 766 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 TIPINQ9BVW5 301 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 ARMCX3Q9UH62 379 aaPredicted RBP17.38■□□□□ 0.37
VPS26A-201ENST00000263559 LRRC37A2A6NM11 1700 aa17.38■□□□□ 0.37
VPS26A-201ENST00000263559 KIF2AO00139 706 aaPredicted RBP17.37■□□□□ 0.37
VPS26A-201ENST00000263559 CCDC175P0C221 793 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 SUPT20HL2P0C7V6 817 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 MAPTP10636 758 aaKnown RBP17.37■□□□□ 0.37
VPS26A-201ENST00000263559 KCNH2Q12809 1159 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 KCTD2Q14681 263 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 EEPD1Q7L9B9 569 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 CEP170P1Q96L14 293 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 MMP19Q99542 508 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 GBA2Q9HCG7 927 aaPredicted RBP17.37■□□□□ 0.37
VPS26A-201ENST00000263559 SYNGAP1Q96PV0 1343 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 UBA1P22314 1058 aaKnown RBP17.37■□□□□ 0.37
VPS26A-201ENST00000263559 NFIL3Q16649 462 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 FAM102BQ5T8I3 360 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 WDR78Q5VTH9 848 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 ZNF526Q8TF50 670 aaPredicted RBP17.37■□□□□ 0.37
VPS26A-201ENST00000263559 IQCDQ96DY2 449 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 DRC1Q96MC2 740 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 GBP3Q9H0R5 595 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 MROH8Q9H579 483 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 PNMA3Q9UL41 463 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 PAXBP1Q9Y5B6 917 aa17.37■□□□□ 0.37
VPS26A-201ENST00000263559 DNAJC25-GNG10A0A024R161 153 aa17.36■□□□□ 0.37
VPS26A-201ENST00000263559 SLC16A3O15427 465 aaKnown RBP17.36■□□□□ 0.37
VPS26A-201ENST00000263559 ATG7O95352 703 aa17.36■□□□□ 0.37
VPS26A-201ENST00000263559 TRIM65Q6PJ69 517 aa17.36■□□□□ 0.37
VPS26A-201ENST00000263559 ZNF397Q8NF99 534 aaPredicted RBP17.36■□□□□ 0.37
VPS26A-201ENST00000263559 SOCS7O14512 581 aa17.36■□□□□ 0.37
VPS26A-201ENST00000263559 CETPP11597 493 aa17.36■□□□□ 0.37
VPS26A-201ENST00000263559 PRKCEQ02156 737 aa17.36■□□□□ 0.37
VPS26A-201ENST00000263559 HS2ST1Q7LGA3 356 aa17.36■□□□□ 0.37
VPS26A-201ENST00000263559 PORCNQ9H237 461 aa17.36■□□□□ 0.37
VPS26A-201ENST00000263559 AGPAT3Q9NRZ7 376 aa17.36■□□□□ 0.37
VPS26A-201ENST00000263559 PDHXO00330 501 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 RIOK3O14730 519 aaKnown RBP17.35■□□□□ 0.37
VPS26A-201ENST00000263559 EPB41P11171 864 aaKnown RBP17.35■□□□□ 0.37
VPS26A-201ENST00000263559 PEX3P56589 373 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 FKBP1BP68106 108 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 MEA1Q16626 185 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 SYT10Q6XYQ8 523 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 SYCP3Q8IZU3 236 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 CRACR2AQ9BSW2 395 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 EFCC1Q9HA90 598 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 METTL14Q9HCE5 456 aaKnown RBP17.35■□□□□ 0.37
VPS26A-201ENST00000263559 SEPT9Q9UHD8 586 aaPredicted RBP17.35■□□□□ 0.37
VPS26A-201ENST00000263559 MCM3APO60318 1980 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 IGSF9BQ9UPX0 1349 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 CCL15-CCL14A0A0B4J2E2 113 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 GOLGA6L9A6NEM1 432 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 BTBD19C9JJ37 291 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 GTF2A2P52657 109 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 CCL15Q16663 113 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 HAUS6Q7Z4H7 955 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 ACRBPQ8NEB7 543 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 MYRIPQ8NFW9 859 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 NEK11Q8NG66 645 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 KIF18AQ8NI77 898 aa17.35■□□□□ 0.37
VPS26A-201ENST00000263559 UQCRHLA0A096LP55 91 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 A0A0U1RQJ8 604 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 FARP2O94887 1054 aaPredicted RBP17.34■□□□□ 0.37
VPS26A-201ENST00000263559 CELF2O95319 508 aaKnown RBP17.34■□□□□ 0.37
VPS26A-201ENST00000263559 UQCRHP07919 91 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 XRCC5P13010 732 aaKnown RBP17.34■□□□□ 0.37
VPS26A-201ENST00000263559 ATP4AP20648 1035 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 SOX10P56693 466 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 ETF1P62495 437 aaKnown RBP17.34■□□□□ 0.37
VPS26A-201ENST00000263559 ALCAMQ13740 583 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 ATRIPQ8WXE1 791 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 BRI3BPQ8WY22 251 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 BORCS6Q96GS4 357 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 ZNF302Q9NR11 478 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 DMAC2Q9NW81 257 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 MAFBQ9Y5Q3 323 aaPredicted RBP17.34■□□□□ 0.37
VPS26A-201ENST00000263559 EPN1Q9Y6I3 576 aaPredicted RBP17.34■□□□□ 0.37
VPS26A-201ENST00000263559 SLC16A4O15374 487 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 TUBB4AP04350 444 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 TGFB3P10600 412 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 PSMC2P35998 433 aaKnown RBP17.34■□□□□ 0.37
VPS26A-201ENST00000263559 NCKAP1LP55160 1127 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 GTF2BQ00403 316 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 NEDD9Q14511 834 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 LY6KQ17RY6 165 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 XKR3Q5GH77 459 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 C2orf69Q8N8R5 385 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 SHCBP1Q8NEM2 672 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 MPHOSPH6Q99547 160 aaKnown RBP17.34■□□□□ 0.37
VPS26A-201ENST00000263559 ST6GALNAC4Q9H4F1 302 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 TMEM206Q9H813 350 aa17.34■□□□□ 0.37
VPS26A-201ENST00000263559 PDLIM7Q9NR12 457 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms