RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 ZNF746Q6NUN9 644 aaPredicted RBP18.01■□□□□ 0.47
ZNF541-201ENST00000263351 SIAH1Q8IUQ4 282 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 ZSWIM2Q8NEG5 633 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 SLC35G2Q8TBE7 412 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 OSBPL7Q9BZF2 842 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 LUC7LQ9NQ29 371 aaKnown RBP18.01■□□□□ 0.47
ZNF541-201ENST00000263351 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.01■□□□□ 0.47
ZNF541-201ENST00000263351 COG5Q9UP83 839 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 DNM1LO00429 736 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 OPLAHO14841 1288 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 H2AFZP0C0S5 128 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 ACTN3Q08043 901 aaPredicted RBP18■□□□□ 0.47
ZNF541-201ENST00000263351 KRT71Q3SY84 523 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 H2AFVQ71UI9 128 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 EPM2AIP1Q7L775 607 aaPredicted RBP18■□□□□ 0.47
ZNF541-201ENST00000263351 TMC3Q7Z5M5 1100 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 CD302Q8IX05 232 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 ZC3H3Q8IXZ2 948 aaKnown RBP18■□□□□ 0.47
ZNF541-201ENST00000263351 ATP8B4Q8TF62 1192 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 ALG3Q92685 438 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 DNAJC5Q9H3Z4 198 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 GOPCQ9HD26 462 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 PNMA2Q9UL42 364 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 STXBP5LQ9Y2K9 1186 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 ZMYM2Q9UBW7 1377 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 ATMINO43313 823 aaPredicted RBP18■□□□□ 0.47
ZNF541-201ENST00000263351 GNA14O95837 355 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 ATP2B4P23634 1241 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 JAM2P57087 298 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 CCDC13Q8IYE1 715 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 ACTRT1Q8TDG2 376 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 SLC20A1Q8WUM9 679 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 RAPGEF5Q92565 580 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 FAM163AQ96GL9 167 aaPredicted RBP18■□□□□ 0.47
ZNF541-201ENST00000263351 THAP2Q9H0W7 228 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 WRAP73Q9P2S5 460 aaPredicted RBP18■□□□□ 0.47
ZNF541-201ENST00000263351 DNM3Q9UQ16 869 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 BTAF1O14981 1849 aa18■□□□□ 0.47
ZNF541-201ENST00000263351 TLDC2A0PJX2 215 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 CAND2O75155 1236 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 DDR1Q08345 913 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 EDRF1Q3B7T1 1238 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 SLFN13Q68D06 897 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 KIAA0825Q8IV33 1275 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 CNPY4Q8N129 248 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 PRPF38AQ8NAV1 312 aaKnown RBP17.99■□□□□ 0.47
ZNF541-201ENST00000263351 JPH2Q9BR39 696 aaPredicted RBP17.99■□□□□ 0.47
ZNF541-201ENST00000263351 TRAF3IP3Q9Y228 551 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 PLIN4Q96Q06 1357 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 GOLGA6L10A6NI86 522 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 HMGB1P1B2RPK0 211 aaPredicted RBP17.99■□□□□ 0.47
ZNF541-201ENST00000263351 hCG_1984214I3L0E3 225 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 FAM107AO95990 144 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 MCTP2Q6DN12 878 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 TPH2Q8IWU9 490 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 ZDHHC14Q8IZN3 488 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 ZNF713Q8N859 430 aaPredicted RBP17.99■□□□□ 0.47
ZNF541-201ENST00000263351 DBNDD1Q9H9R9 158 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 NENFQ9UMX5 172 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 SNX24Q9Y343 169 aa17.99■□□□□ 0.47
ZNF541-201ENST00000263351 LOC102724159A0A0B4J2E5 919 aa17.98■□□□□ 0.47
ZNF541-201ENST00000263351 GYS1P13807 737 aa17.98■□□□□ 0.47
ZNF541-201ENST00000263351 SLCO1A2P46721 670 aa17.98■□□□□ 0.47
ZNF541-201ENST00000263351 DRAP1Q14919 205 aaPredicted RBP17.98■□□□□ 0.47
ZNF541-201ENST00000263351 PWP2Q15269 919 aaKnown RBP17.98■□□□□ 0.47
ZNF541-201ENST00000263351 APOBEC3HQ6NTF7 200 aaKnown RBP17.98■□□□□ 0.47
ZNF541-201ENST00000263351 SYT2Q8N9I0 419 aaPredicted RBP17.98■□□□□ 0.47
ZNF541-201ENST00000263351 KRT35Q92764 455 aa17.98■□□□□ 0.47
ZNF541-201ENST00000263351 FAM84AQ96KN4 292 aa17.98■□□□□ 0.47
ZNF541-201ENST00000263351 GPR88Q9GZN0 384 aa17.98■□□□□ 0.47
ZNF541-201ENST00000263351 PKD2L1Q9P0L9 805 aa17.98■□□□□ 0.47
ZNF541-201ENST00000263351 ZNF219Q9P2Y4 722 aaPredicted RBP17.98■□□□□ 0.47
ZNF541-201ENST00000263351 MYO3BQ8WXR4 1341 aa17.98■□□□□ 0.47
ZNF541-201ENST00000263351 SPDYE3A6NKU9 549 aa17.98■□□□□ 0.47
ZNF541-201ENST00000263351 DLG4P78352 724 aa17.98■□□□□ 0.47
ZNF541-201ENST00000263351 B4GALNT4Q76KP1 1039 aa17.98■□□□□ 0.47
ZNF541-201ENST00000263351 FRMD5Q7Z6J6 570 aa17.98■□□□□ 0.47
ZNF541-201ENST00000263351 C18orf8Q96DM3 657 aa17.98■□□□□ 0.47
ZNF541-201ENST00000263351 BTBD6Q96KE9 485 aa17.98■□□□□ 0.47
ZNF541-201ENST00000263351 TCRBV7S2A1N4TA0A589 114 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 F8VZ95 297 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 FLOT1O75955 427 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 CALCAP01258 141 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 SH3BP5LQ7L8J4 393 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 MYCT1Q8N699 235 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 EIF2AK1Q9BQI3 630 aaKnown RBP17.97■□□□□ 0.47
ZNF541-201ENST00000263351 EPB41L4BQ9H329 900 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 GGT7Q9UJ14 662 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 DNAJC12Q9UKB3 198 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 DDX3YO15523 660 aaKnown RBP17.97■□□□□ 0.47
ZNF541-201ENST00000263351 GCFC2P16383 781 aaKnown RBP17.97■□□□□ 0.47
ZNF541-201ENST00000263351 PLTPP55058 493 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 CRY2Q49AN0 593 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 CCDC38Q502W7 563 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 CRYGNQ8WXF5 182 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 KAT5Q92993 513 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 PBKQ96KB5 322 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 PCIF1Q9H4Z3 704 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 HAUS2Q9NVX0 235 aa17.97■□□□□ 0.47
ZNF541-201ENST00000263351 VAV3Q9UKW4 847 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms