RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 NUDCD1Q96RS6 583 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 GTSE1Q9NYZ3 720 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 CNOT8Q9UFF9 292 aaKnown RBP12.92□□□□□ -0.34
SMG6-201ENST00000263073 NOC2LQ9Y3T9 749 aaKnown RBP12.92□□□□□ -0.34
SMG6-201ENST00000263073 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMG6-201ENST00000263073 ERVV-2B6SEH9 535 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 CDR2Q01850 454 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 MECOMQ03112 1051 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 EPHA10Q5JZY3 1008 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 HAUS5O94927 633 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 ASPRV1Q53RT3 343 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 RSRC2Q7L4I2 434 aaKnown RBP12.92□□□□□ -0.34
SMG6-201ENST00000263073 SFR1Q86XK3 245 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 PDIK1LQ8N165 341 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 NCLNQ969V3 563 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 BNIP3LO60238 219 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 SOX11P35716 441 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 ARL4AP40617 200 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 STAT3P40763 770 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 NCAPHQ15003 741 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 FAM182BQ5T319 152 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 MCF2L2Q86YR7 1114 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 ZNF668Q96K58 619 aaPredicted RBP12.92□□□□□ -0.34
SMG6-201ENST00000263073 SERPINI1Q99574 410 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 CHP1Q99653 195 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 KIF9Q9HAQ2 790 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 IRAK4Q9NWZ3 460 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 CHGBP05060 677 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 SHC4Q6S5L8 630 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 ANKMY2Q8IV38 441 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 FBXL13Q8NEE6 735 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 TUBB6Q9BUF5 446 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 OSBPL5Q9H0X9 879 aaPredicted RBP12.91□□□□□ -0.34
SMG6-201ENST00000263073 NGRNQ9NPE2 291 aaKnown RBP12.91□□□□□ -0.34
SMG6-201ENST00000263073 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.91□□□□□ -0.34
SMG6-201ENST00000263073 STRIP2Q9ULQ0 834 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 TCP11X1B4DZS4 312 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 CRKLP46109 303 aaKnown RBP12.91□□□□□ -0.34
SMG6-201ENST00000263073 ZBED8Q8IZ13 594 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 NRBP2Q9NSY0 501 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 PCSK1NQ9UHG2 260 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 PLXNC1O60486 1568 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 E4F1Q66K89 784 aaPredicted RBP12.91□□□□□ -0.34
SMG6-201ENST00000263073 KIF2BQ8N4N8 673 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 NACC1Q96RE7 527 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 NUP85Q9BW27 656 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 ADA2Q9NZK5 511 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 HACD3Q9P035 362 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 CEP72Q9P209 647 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 APOBEC2Q9Y235 224 aaKnown RBP12.91□□□□□ -0.34
SMG6-201ENST00000263073 GCC2Q8IWJ2 1684 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 MDM2Q00987 491 aaPredicted RBP12.91□□□□□ -0.34
SMG6-201ENST00000263073 CDC37Q16543 378 aaPredicted RBP12.91□□□□□ -0.34
SMG6-201ENST00000263073 PPM1NQ8N819 430 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 SNX25Q9H3E2 840 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 DBR1Q9UK59 544 aaKnown RBP12.91□□□□□ -0.34
SMG6-201ENST00000263073 KCNH2Q12809 1159 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 CCHCR1Q8TD31 782 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 POLR3CQ9BUI4 534 aaPredicted RBP12.91□□□□□ -0.34
SMG6-201ENST00000263073 SPC25Q9HBM1 224 aa12.91□□□□□ -0.34
SMG6-201ENST00000263073 MLH3Q9UHC1 1453 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 NPHP3-ACAD11A0A0J9YXS1 232 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 SRGAP2BP0DMP2 458 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 PTPREP23469 700 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 GNL1P36915 607 aaPredicted RBP12.9□□□□□ -0.34
SMG6-201ENST00000263073 LRRC63Q05C16 580 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 CYTH1Q15438 398 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 RWDD4Q6NW29 188 aaKnown RBP12.9□□□□□ -0.34
SMG6-201ENST00000263073 SYNE4Q8N205 404 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 ZNF473Q8WTR7 871 aaKnown RBP12.9□□□□□ -0.34
SMG6-201ENST00000263073 USP17L5A8MUK1 530 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 CTIFO43310 598 aaKnown RBP12.9□□□□□ -0.34
SMG6-201ENST00000263073 SOX5P35711 763 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 CACNB3P54284 484 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 ALDH18A1P54886 795 aaKnown RBP12.9□□□□□ -0.34
SMG6-201ENST00000263073 PSMC1P62191 440 aaKnown RBP12.9□□□□□ -0.34
SMG6-201ENST00000263073 MTM1Q13496 603 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 SLC7A3Q8WY07 619 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 C11orf70Q9BRQ4 267 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 LPXNO60711 386 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 EIF2AK2P19525 551 aaKnown RBP12.9□□□□□ -0.34
SMG6-201ENST00000263073 CCZ1BP86790 482 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 CCZ1P86791 482 aaPredicted RBP12.9□□□□□ -0.34
SMG6-201ENST00000263073 ERICH1Q86X53 443 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 TRIM51Q9BSJ1 452 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 TAF1DQ9H5J8 278 aaPredicted RBP12.9□□□□□ -0.34
SMG6-201ENST00000263073 PALM3A6NDB9 673 aaPredicted RBP12.9□□□□□ -0.34
SMG6-201ENST00000263073 SYNDIG1LA6NDD5 238 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 GUCY1A2P33402 732 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 KDSRQ06136 332 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 PARD3BQ8TEW8 1205 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 TMEM206Q9H813 350 aa12.9□□□□□ -0.34
SMG6-201ENST00000263073 NPR1P16066 1061 aa12.9□□□□□ -0.35
SMG6-201ENST00000263073 CYP2C19P33261 490 aa12.9□□□□□ -0.35
SMG6-201ENST00000263073 PDIA2Q13087 525 aaKnown RBP12.9□□□□□ -0.35
SMG6-201ENST00000263073 GPS1Q13098 491 aa12.9□□□□□ -0.35
SMG6-201ENST00000263073 PRPF38AQ8NAV1 312 aaKnown RBP12.9□□□□□ -0.35
SMG6-201ENST00000263073 ZNF507Q8TCN5 953 aa12.9□□□□□ -0.35
SMG6-201ENST00000263073 COG1Q8WTW3 980 aa12.9□□□□□ -0.35
SMG6-201ENST00000263073 FAM118BQ9BPY3 351 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms