RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 ADAM17P78536 824 aa27.09■■□□□ 1.93
SCN1B-201ENST00000262631 TBC1D8BQ0IIM8 1120 aa27.09■■□□□ 1.93
SCN1B-201ENST00000262631 POSTNQ15063 836 aa27.09■■□□□ 1.93
SCN1B-201ENST00000262631 KANK3Q6NY19 840 aa27.09■■□□□ 1.93
SCN1B-201ENST00000262631 CAVIN1Q6NZI2 390 aaKnown RBP27.09■■□□□ 1.93
SCN1B-201ENST00000262631 XPNPEP1Q9NQW7 623 aa27.09■■□□□ 1.93
SCN1B-201ENST00000262631 KLRC1P26715 233 aa27.08■■□□□ 1.93
SCN1B-201ENST00000262631 POLGP54098 1239 aaPredicted RBP27.08■■□□□ 1.93
SCN1B-201ENST00000262631 FAM47CQ5HY64 1035 aa27.08■■□□□ 1.93
SCN1B-201ENST00000262631 DNAJC19Q96DA6 116 aa27.08■■□□□ 1.93
SCN1B-201ENST00000262631 C7orf25Q9BPX7 421 aa27.08■■□□□ 1.93
SCN1B-201ENST00000262631 REEP2Q9BRK0 252 aa27.08■■□□□ 1.93
SCN1B-201ENST00000262631 NUP62CLQ9H1M0 184 aa27.08■■□□□ 1.93
SCN1B-201ENST00000262631 GTF2IRD1Q9UHL9 959 aa27.08■■□□□ 1.93
SCN1B-201ENST00000262631 COL1A2P08123 1366 aa27.08■■□□□ 1.93
SCN1B-201ENST00000262631 ARID2Q68CP9 1835 aa27.08■■□□□ 1.93
SCN1B-201ENST00000262631 DGAT1O75907 488 aa27.08■■□□□ 1.92
SCN1B-201ENST00000262631 AMPD3Q01432 767 aa27.08■■□□□ 1.92
SCN1B-201ENST00000262631 EMC2Q15006 297 aa27.08■■□□□ 1.92
SCN1B-201ENST00000262631 SLC7A3Q8WY07 619 aa27.08■■□□□ 1.92
SCN1B-201ENST00000262631 GPRC5CQ9NQ84 441 aa27.08■■□□□ 1.92
SCN1B-201ENST00000262631 RRN3P2A6NIE6 340 aa27.07■■□□□ 1.92
SCN1B-201ENST00000262631 MAFO75444 373 aaPredicted RBP27.07■■□□□ 1.92
SCN1B-201ENST00000262631 GUCY2CP25092 1073 aa27.07■■□□□ 1.92
SCN1B-201ENST00000262631 DRP2Q13474 957 aa27.07■■□□□ 1.92
SCN1B-201ENST00000262631 GIT2Q14161 759 aa27.07■■□□□ 1.92
SCN1B-201ENST00000262631 SKOR2Q2VWA4 1001 aaPredicted RBP27.07■■□□□ 1.92
SCN1B-201ENST00000262631 GDF6Q6KF10 455 aaPredicted RBP27.07■■□□□ 1.92
SCN1B-201ENST00000262631 NFRKBQ6P4R8 1299 aa27.07■■□□□ 1.92
SCN1B-201ENST00000262631 MTHFD1LQ6UB35 978 aa27.07■■□□□ 1.92
SCN1B-201ENST00000262631 ELOA2Q8IYF1 753 aaPredicted RBP27.07■■□□□ 1.92
SCN1B-201ENST00000262631 SENP6Q9GZR1 1112 aaPredicted RBP27.07■■□□□ 1.92
SCN1B-201ENST00000262631 ATP6V0A4Q9HBG4 840 aa27.07■■□□□ 1.92
SCN1B-201ENST00000262631 KCND2Q9NZV8 630 aa27.07■■□□□ 1.92
SCN1B-201ENST00000262631 PPME1Q9Y570 386 aa27.07■■□□□ 1.92
SCN1B-201ENST00000262631 IGKV6-21A0A0C4DH24 114 aa27.06■■□□□ 1.92
SCN1B-201ENST00000262631 C17orf102A2RUQ5 167 aa27.06■■□□□ 1.92
SCN1B-201ENST00000262631 RSPH10B2B2RC85 870 aa27.06■■□□□ 1.92
SCN1B-201ENST00000262631 TREHO43280 583 aa27.06■■□□□ 1.92
SCN1B-201ENST00000262631 GTPBP6O43824 516 aaPredicted RBP27.06■■□□□ 1.92
SCN1B-201ENST00000262631 RSPH10BP0C881 870 aa27.06■■□□□ 1.92
SCN1B-201ENST00000262631 RFC5P40937 340 aa27.06■■□□□ 1.92
SCN1B-201ENST00000262631 DPYDQ12882 1025 aa27.06■■□□□ 1.92
SCN1B-201ENST00000262631 MKRN4PQ13434 485 aaPredicted RBP27.06■■□□□ 1.92
SCN1B-201ENST00000262631 SESTD1Q86VW0 696 aa27.06■■□□□ 1.92
SCN1B-201ENST00000262631 DAW1Q8N136 415 aa27.06■■□□□ 1.92
SCN1B-201ENST00000262631 LRRC71Q8N4P6 559 aa27.06■■□□□ 1.92
SCN1B-201ENST00000262631 ANKLE1Q8NAG6 615 aa27.06■■□□□ 1.92
SCN1B-201ENST00000262631 SLC43A3Q8NBI5 491 aa27.06■■□□□ 1.92
SCN1B-201ENST00000262631 TUBE1Q9UJT0 475 aa27.06■■□□□ 1.92
SCN1B-201ENST00000262631 A0A0U1RQG5 324 aaPredicted RBP27.05■■□□□ 1.92
SCN1B-201ENST00000262631 MBLAC1A4D2B0 266 aaPredicted RBP27.05■■□□□ 1.92
SCN1B-201ENST00000262631 KRT18P05783 430 aaKnown RBP27.05■■□□□ 1.92
SCN1B-201ENST00000262631 COL6A1P12109 1028 aa27.05■■□□□ 1.92
SCN1B-201ENST00000262631 EN2P19622 333 aaPredicted RBP27.05■■□□□ 1.92
SCN1B-201ENST00000262631 MAPK7Q13164 816 aa27.05■■□□□ 1.92
SCN1B-201ENST00000262631 TMEM143Q96AN5 459 aa27.05■■□□□ 1.92
SCN1B-201ENST00000262631 SUGCTQ9HAC7 445 aa27.05■■□□□ 1.92
SCN1B-201ENST00000262631 HIP1RO75146 1068 aa27.05■■□□□ 1.92
SCN1B-201ENST00000262631 ASIC1P78348 528 aa27.05■■□□□ 1.92
SCN1B-201ENST00000262631 CNNM4Q6P4Q7 775 aa27.05■■□□□ 1.92
SCN1B-201ENST00000262631 METTL13Q8N6R0 699 aa27.05■■□□□ 1.92
SCN1B-201ENST00000262631 CCDC34Q96HJ3 373 aa27.05■■□□□ 1.92
SCN1B-201ENST00000262631 CTAGE1Q96RT6 745 aa27.05■■□□□ 1.92
SCN1B-201ENST00000262631 LRRC27Q9C0I9 530 aa27.05■■□□□ 1.92
SCN1B-201ENST00000262631 LOXHD1Q8IVV2 1947 aa27.04■■□□□ 1.92
SCN1B-201ENST00000262631 SFI1A8K8P3 1242 aa27.04■■□□□ 1.92
SCN1B-201ENST00000262631 CLCN3P51790 818 aa27.04■■□□□ 1.92
SCN1B-201ENST00000262631 CCDC183Q5T5S1 534 aa27.04■■□□□ 1.92
SCN1B-201ENST00000262631 FAM102BQ5T8I3 360 aa27.04■■□□□ 1.92
SCN1B-201ENST00000262631 EFCAB12Q6NXP0 572 aa27.04■■□□□ 1.92
SCN1B-201ENST00000262631 RUFY4Q6ZNE9 571 aa27.04■■□□□ 1.92
SCN1B-201ENST00000262631 PAWRQ96IZ0 340 aaKnown RBP27.04■■□□□ 1.92
SCN1B-201ENST00000262631 PCDHA5Q9Y5H7 936 aa27.04■■□□□ 1.92
SCN1B-201ENST00000262631 ARVCFO00192 962 aa27.03■■□□□ 1.92
SCN1B-201ENST00000262631 LINC01465Q8N7H1 131 aa27.03■■□□□ 1.92
SCN1B-201ENST00000262631 MCPH1Q8NEM0 835 aa27.03■■□□□ 1.92
SCN1B-201ENST00000262631 TRMT13Q9NUP7 481 aaKnown RBP27.03■■□□□ 1.92
SCN1B-201ENST00000262631 HOOK1Q9UJC3 728 aaKnown RBP27.03■■□□□ 1.92
SCN1B-201ENST00000262631 MAGEB2O15479 319 aa27.02■■□□□ 1.92
SCN1B-201ENST00000262631 KLRC4O43908 158 aa27.02■■□□□ 1.92
SCN1B-201ENST00000262631 MYL1P05976 194 aa27.02■■□□□ 1.92
SCN1B-201ENST00000262631 GNAT1P11488 350 aa27.02■■□□□ 1.92
SCN1B-201ENST00000262631 IDEP14735 1019 aa27.02■■□□□ 1.92
SCN1B-201ENST00000262631 ATN1P54259 1190 aaPredicted RBP27.02■■□□□ 1.92
SCN1B-201ENST00000262631 CDK7P50613 346 aa27.01■■□□□ 1.92
SCN1B-201ENST00000262631 SPATA20Q8TB22 786 aa27.01■■□□□ 1.92
SCN1B-201ENST00000262631 POLR3FQ9H1D9 316 aaPredicted RBP27.01■■□□□ 1.92
SCN1B-201ENST00000262631 ODF2LQ9ULJ1 636 aa27.01■■□□□ 1.92
SCN1B-201ENST00000262631 PCDHA2Q9Y5H9 948 aa27.01■■□□□ 1.92
SCN1B-201ENST00000262631 PTPN11Q06124 597 aaPredicted RBP27.01■■□□□ 1.91
SCN1B-201ENST00000262631 PTGISQ16647 500 aa27.01■■□□□ 1.91
SCN1B-201ENST00000262631 RETREG2Q8NC44 543 aa27.01■■□□□ 1.91
SCN1B-201ENST00000262631 TRPV6Q9H1D0 765 aa27.01■■□□□ 1.91
SCN1B-201ENST00000262631 ZHX3Q9H4I2 956 aa27.01■■□□□ 1.91
SCN1B-201ENST00000262631 FRMD3A2A2Y4 597 aa27■■□□□ 1.91
SCN1B-201ENST00000262631 RPN1P04843 607 aaKnown RBP27■■□□□ 1.91
SCN1B-201ENST00000262631 CYP2C9P11712 490 aa27■■□□□ 1.91
SCN1B-201ENST00000262631 ARL2P36404 184 aa27■■□□□ 1.91
SCN1B-201ENST00000262631 ZNF131P52739 623 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms