RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 PARD6BQ9BYG5 372 aa14.18□□□□□ -0.14
SPTLC1-201ENST00000262554 GBP3Q9H0R5 595 aa14.18□□□□□ -0.14
SPTLC1-201ENST00000262554 ZNF446Q9NWS9 450 aa14.18□□□□□ -0.14
SPTLC1-201ENST00000262554 GPRC5DQ9NZD1 345 aa14.18□□□□□ -0.14
SPTLC1-201ENST00000262554 LARSQ9P2J5 1176 aaKnown RBP14.18□□□□□ -0.14
SPTLC1-201ENST00000262554 GTPBP10A4D1E9 387 aaKnown RBP14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 PJA2O43164 708 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 TLR2O60603 784 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 SLC9A1P19634 815 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 CCND2P30279 289 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 SFNP31947 248 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 KRT76Q01546 638 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 APBA1Q02410 837 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 GFPT1Q06210 699 aaPredicted RBP14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 KLHL30Q0D2K2 578 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 MAPK7Q13164 816 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 ALCAMQ13740 583 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 BAATQ14032 418 aaPredicted RBP14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 BMS1Q14692 1282 aaKnown RBP14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 COG2Q14746 738 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 SNRNP48Q6IEG0 339 aaKnown RBP14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 GPIHBP1Q8IV16 184 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 SYCP3Q8IZU3 236 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 TRPM4Q8TD43 1214 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 WNK4Q96J92 1243 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 ALS2CR12Q96Q35 445 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 SPAG5Q96R06 1193 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 EPC1Q9H2F5 836 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 GGA3Q9NZ52 723 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 TMOD4Q9NZQ9 345 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 FRMD4BQ9Y2L6 1034 aa14.17□□□□□ -0.14
SPTLC1-201ENST00000262554 TESPA1A2RU30 521 aaPredicted RBP14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 MAPTP10636 758 aaKnown RBP14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 UCHL3P15374 230 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 ZSCAN20P17040 1043 aaPredicted RBP14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 PON1P27169 355 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 RARRES1P49788 294 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 KLHDC7AQ5VTJ3 777 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 KSR1Q8IVT5 923 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 GPC2Q8N158 579 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 FAM133AQ8N9E0 248 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 REPS2Q8NFH8 660 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 NLGN2Q8NFZ4 835 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 KLRG1Q96E93 195 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 BORCS6Q96GS4 357 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 TIPINQ9BVW5 301 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 AGPAT3Q9NRZ7 376 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 HDAC6Q9UBN7 1215 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 FBXL5Q9UKA1 691 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 ADAMTS5Q9UNA0 930 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 JRKLQ9Y4A0 524 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 RIPK3Q9Y572 518 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 WDR64B1ANS9 1081 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 K7ENM7 598 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 PPP1R37O75864 691 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 ACTN1P12814 892 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 YWHABP31946 246 aaKnown RBP14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 PSMC5P62195 406 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 CKAP4Q07065 602 aaKnown RBP14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 SUPT20HL1Q3ZLR7 823 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 C4orf19Q8IY42 314 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 DAW1Q8N136 415 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 STRA6Q9BX79 667 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 DMAC2Q9NW81 257 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 GCNT4Q9P109 453 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 FZD1Q9UP38 647 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 BZW2Q9Y6E2 419 aaKnown RBP14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 KIAA1217Q5T5P2 1943 aa14.16□□□□□ -0.14
SPTLC1-201ENST00000262554 MOCS3O95396 460 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 TFRCP02786 760 aaKnown RBP14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 CYP2J2P51589 502 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 ARID5AQ03989 594 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 MYBPC2Q14324 1141 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 SLC18A3Q16572 532 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 NOL9Q5SY16 702 aaKnown RBP14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 DPY19L2P1Q6NXN4 242 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 CATSPERGQ6ZRH7 1159 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 MAEAQ7L5Y9 396 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 NLRX1Q86UT6 975 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 VSIG10LQ86VR7 867 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 SLC9A9Q8IVB4 645 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 RDM1Q8NG50 284 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 NSUN6Q8TEA1 469 aaKnown RBP14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 GPRASP2Q96D09 838 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 IKZF4Q9H2S9 585 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 TMEM206Q9H813 350 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 MLXIPQ9HAP2 919 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 MYH10P35580 1976 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 WDR81Q562E7 1941 aa14.15□□□□□ -0.14
SPTLC1-201ENST00000262554 POLR2AP24928 1970 aaKnown RBP14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 ATP2A1O14983 1001 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 MAFGO15525 162 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 ATP9AO75110 1047 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 ZRANB2O95218 330 aaKnown RBP eCLIP14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 NR3C2P08235 984 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 PLS3P13797 630 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 BRD3Q15059 726 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 PPP2R5AQ15172 486 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 KRT222Q8N1A0 295 aa14.14□□□□□ -0.15
SPTLC1-201ENST00000262554 RNF10Q8N5U6 811 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms