RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 STK3Q13188 491 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 PKN1Q16512 942 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 MIER3Q7Z3K6 550 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 TMEM87AQ8NBN3 555 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 SLKQ9H2G2 1235 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-202ENST00000262396 TMX1Q9H3N1 280 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 TLE6Q9H808 572 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 CDHR5Q9HBB8 845 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 SH3GLB2Q9NR46 395 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 RGS18Q9NS28 235 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 C22orf31O95567 290 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 OATP04181 439 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 XBP1P17861 261 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 PDIA3P30101 505 aaKnown RBP13.81□□□□□ -0.2
TRAF4-202ENST00000262396 PLA2G5P39877 138 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 DNM2P50570 870 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 USP11P51784 963 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 SMAD4Q13485 552 aaKnown RBP13.81□□□□□ -0.2
TRAF4-202ENST00000262396 BMS1Q14692 1282 aaKnown RBP13.81□□□□□ -0.2
TRAF4-202ENST00000262396 RUFY3Q7L099 469 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 ADHFE1Q8IWW8 467 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 ZNF710Q8N1W2 664 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 LRRC71Q8N4P6 559 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 SPPL3Q8TCT6 385 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 TBCKQ8TEA7 893 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 KCNB2Q92953 911 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 ZNF668Q96K58 619 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-202ENST00000262396 RC3H2Q9HBD1 1191 aaKnown RBP13.81□□□□□ -0.2
TRAF4-202ENST00000262396 CD320Q9NPF0 282 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 TLR9Q9NR96 1032 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 TMEM161AQ9NX61 479 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 SEPT9Q9UHD8 586 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-202ENST00000262396 COL4A6Q14031 1691 aa13.81□□□□□ -0.2
TRAF4-202ENST00000262396 FSD2A1L4K1 749 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 MSH4O15457 936 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 CDKL5O76039 1030 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 DEXIO95424 95 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 FGFR1P11362 822 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 LAG3P18627 525 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 ATP4AP20648 1035 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 CIITAP33076 1130 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 GTF2F1P35269 517 aaKnown RBP eCLIP13.8□□□□□ -0.21e-10■■■■□ 26.4
TRAF4-202ENST00000262396 PRKCEQ02156 737 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 KRT17Q04695 432 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 UBE3AQ05086 875 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 MTERF2Q49AM1 385 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 FAM102BQ5T8I3 360 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 FAM228AQ86W67 206 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 TMEM40Q8WWA1 233 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 KHSRPQ92945 711 aaKnown RBP eCLIP13.8□□□□□ -0.2
TRAF4-202ENST00000262396 RIT2Q99578 217 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 ENTPD7Q9NQZ7 604 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 TYW1Q9NV66 732 aaKnown RBP13.8□□□□□ -0.2
TRAF4-202ENST00000262396 PCDHA4Q9UN74 947 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 BDP1A6H8Y1 2624 aa13.8□□□□□ -0.2
TRAF4-202ENST00000262396 DDX11L8A8MPP1 907 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 PRR33A8MZF0 331 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 LINC01565O15544 149 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 MBTPS2O43462 519 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 MGEA5O60502 916 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 FGF18O76093 207 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 IRS1P35568 1242 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 CDC42EP1Q00587 391 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 ZP2Q05996 745 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 ADAM15Q13444 863 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 NONOQ15233 471 aaKnown RBP eCLIP13.79□□□□□ -0.22e-7■■□□□ 12.9
TRAF4-202ENST00000262396 BLIDQ8IZY5 108 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 FBXL16Q8N461 479 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 EFHBQ8N7U6 833 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 LARP6Q9BRS8 491 aaKnown RBP13.79□□□□□ -0.2
TRAF4-202ENST00000262396 GCOM2Q9BZD3 368 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-202ENST00000262396 TMEM117Q9H0C3 514 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 PDRG1Q9NUG6 133 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 DACT1Q9NYF0 836 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 MUC3AQ02505 3323 aa13.79□□□□□ -0.2
TRAF4-202ENST00000262396 RALGAPA2Q2PPJ7 1873 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 NLRC5Q86WI3 1866 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 CCDC194A0A1B0GVG4 234 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 C9IYK1 514 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 PER2O15055 1255 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 GPR32O75388 356 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 LINC00271P0C7V0 271 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 EIF4BP23588 611 aaKnown RBP13.78□□□□□ -0.2
TRAF4-202ENST00000262396 DNAJB1P25685 340 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 PPM1AP35813 382 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 DLX2Q07687 328 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-202ENST00000262396 SMAD2Q15796 467 aaKnown RBP13.78□□□□□ -0.2
TRAF4-202ENST00000262396 CTC1Q2NKJ3 1217 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 PLPP4Q5VZY2 271 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 PDE12Q6L8Q7 609 aaKnown RBP13.78□□□□□ -0.2
TRAF4-202ENST00000262396 TMC7Q7Z402 723 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 LRRC43Q8N309 656 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 COLGALT1Q8NBJ5 622 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 RDM1Q8NG50 284 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 CRYGNQ8WXF5 182 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 ZNF274Q96GC6 653 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-202ENST00000262396 ZNF558Q96NG5 402 aa13.78□□□□□ -0.2
TRAF4-202ENST00000262396 JPH2Q9BR39 696 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-202ENST00000262396 INO80BQ9C086 356 aaPredicted RBP13.78□□□□□ -0.2
TRAF4-202ENST00000262396 UNC45AQ9H3U1 944 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms