RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 DNAJC18Q9H819 358 aa21.06■□□□□ 0.96
SCARB1-201ENST00000261693 CNOT8Q9UFF9 292 aaKnown RBP21.06■□□□□ 0.96
SCARB1-201ENST00000261693 ATXN2Q99700 1313 aaKnown RBP21.06■□□□□ 0.96
SCARB1-201ENST00000261693 TAF1LQ8IZX4 1826 aa21.06■□□□□ 0.96
SCARB1-201ENST00000261693 CCDC188H7C350 402 aa21.06■□□□□ 0.96
SCARB1-201ENST00000261693 BUB1BO60566 1050 aaPredicted RBP21.06■□□□□ 0.96
SCARB1-201ENST00000261693 ZC2HC1CQ53FD0 456 aaPredicted RBP21.06■□□□□ 0.96
SCARB1-201ENST00000261693 MCTP2Q6DN12 878 aa21.06■□□□□ 0.96
SCARB1-201ENST00000261693 ARFGAP2Q8N6H7 521 aa21.06■□□□□ 0.96
SCARB1-201ENST00000261693 GLT8D2Q9H1C3 349 aa21.06■□□□□ 0.96
SCARB1-201ENST00000261693 PPP1R9AQ9ULJ8 1098 aa21.06■□□□□ 0.96
SCARB1-201ENST00000261693 MYO3BQ8WXR4 1341 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 FSBPO95073 299 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 NMT1P30419 496 aaKnown RBP21.05■□□□□ 0.96
SCARB1-201ENST00000261693 IKQ13123 557 aaPredicted RBP21.05■□□□□ 0.96
SCARB1-201ENST00000261693 TMC3Q7Z5M5 1100 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 RASGEF1CQ8N431 466 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 SLC35G2Q8TBE7 412 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 CRYGNQ8WXF5 182 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 METTL14Q9HCE5 456 aaKnown RBP21.05■□□□□ 0.96
SCARB1-201ENST00000261693 SLC12A6Q9UHW9 1150 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 SMCHD1A6NHR9 2005 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 IGSF9BQ9UPX0 1349 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 EML1O00423 815 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 MSH4O15457 936 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 COG2Q14746 738 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 CCDC26Q8TAB7 109 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 HES6Q96HZ4 224 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 AMFRQ9UKV5 643 aa21.05■□□□□ 0.96
SCARB1-201ENST00000261693 SPDYE3A6NKU9 549 aa21.04■□□□□ 0.96
SCARB1-201ENST00000261693 BHMG1C9JSJ3 638 aaPredicted RBP21.04■□□□□ 0.96
SCARB1-201ENST00000261693 TGFB1I1O43294 461 aa21.04■□□□□ 0.96
SCARB1-201ENST00000261693 QPCTQ16769 361 aa21.04■□□□□ 0.96
SCARB1-201ENST00000261693 RUFY4Q6ZNE9 571 aa21.04■□□□□ 0.96
SCARB1-201ENST00000261693 SYCE1Q8N0S2 351 aa21.04■□□□□ 0.96
SCARB1-201ENST00000261693 PAGR1Q9BTK6 254 aa21.04■□□□□ 0.96
SCARB1-201ENST00000261693 SEPT11Q9NVA2 429 aaKnown RBP21.04■□□□□ 0.96
SCARB1-201ENST00000261693 ATP8A1Q9Y2Q0 1164 aa21.04■□□□□ 0.96
SCARB1-201ENST00000261693 UTP11Q9Y3A2 253 aaKnown RBP21.04■□□□□ 0.96
SCARB1-201ENST00000261693 RABGAP1Q9Y3P9 1069 aa21.04■□□□□ 0.96
SCARB1-201ENST00000261693 PCDHAC2Q9Y5I4 1007 aa21.04■□□□□ 0.96
SCARB1-201ENST00000261693 GMNCA6NCL1 334 aa21.04■□□□□ 0.96
SCARB1-201ENST00000261693 ZBTB39O15060 712 aa21.04■□□□□ 0.96
SCARB1-201ENST00000261693 STAT1P42224 750 aa21.04■□□□□ 0.96
SCARB1-201ENST00000261693 MAGOHP61326 146 aaKnown RBP21.04■□□□□ 0.96
SCARB1-201ENST00000261693 CTTNQ14247 550 aaKnown RBP21.04■□□□□ 0.96
SCARB1-201ENST00000261693 KRT71Q3SY84 523 aa21.04■□□□□ 0.96
SCARB1-201ENST00000261693 MAGOHBQ96A72 148 aaKnown RBP21.04■□□□□ 0.96
SCARB1-201ENST00000261693 SLITRK6Q9H5Y7 841 aa21.04■□□□□ 0.96
SCARB1-201ENST00000261693 SLC16A3O15427 465 aaKnown RBP21.03■□□□□ 0.96
SCARB1-201ENST00000261693 GYS1P13807 737 aa21.03■□□□□ 0.96
SCARB1-201ENST00000261693 FERP16591 822 aa21.03■□□□□ 0.96
SCARB1-201ENST00000261693 AP3B2Q13367 1082 aa21.03■□□□□ 0.96
SCARB1-201ENST00000261693 BIRC3Q13489 604 aa21.03■□□□□ 0.96
SCARB1-201ENST00000261693 DCAF12L1Q5VU92 463 aa21.03■□□□□ 0.96
SCARB1-201ENST00000261693 FAM186BQ8IYM0 893 aa21.03■□□□□ 0.96
SCARB1-201ENST00000261693 EIF2AK1Q9BQI3 630 aaKnown RBP21.03■□□□□ 0.96
SCARB1-201ENST00000261693 LRRC4BQ9NT99 713 aa21.03■□□□□ 0.96
SCARB1-201ENST00000261693 DDX20Q9UHI6 824 aaKnown RBP21.03■□□□□ 0.96
SCARB1-201ENST00000261693 A0A0A6YYK5 440 aaPredicted RBP21.03■□□□□ 0.96
SCARB1-201ENST00000261693 PPP2R2AP63151 447 aa21.03■□□□□ 0.96
SCARB1-201ENST00000261693 ZNF211Q13398 564 aaPredicted RBP21.03■□□□□ 0.96
SCARB1-201ENST00000261693 Q4G0T1 1027 aa21.03■□□□□ 0.96
SCARB1-201ENST00000261693 YTHDF3Q7Z739 585 aaKnown RBP21.03■□□□□ 0.96
SCARB1-201ENST00000261693 MYCT1Q8N699 235 aa21.03■□□□□ 0.96
SCARB1-201ENST00000261693 OLIG1Q8TAK6 271 aa21.03■□□□□ 0.96
SCARB1-201ENST00000261693 F8VZ95 297 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 SLC26A4O43511 780 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 CHMP2AO43633 222 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 MTMR3Q13615 1198 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 DRAP1Q14919 205 aaPredicted RBP21.02■□□□□ 0.96
SCARB1-201ENST00000261693 BMT2Q1RMZ1 405 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 APOBEC3HQ6NTF7 200 aaKnown RBP21.02■□□□□ 0.96
SCARB1-201ENST00000261693 MOXD1Q6UVY6 613 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 AMNQ9BXJ7 453 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 DNAJC12Q9UKB3 198 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 TRAPPC3O43617 180 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 SOX5P35711 763 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 ZNF76P36508 570 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 IFFO1Q0D2I5 559 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 RINT1Q6NUQ1 792 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 SLC30A5Q8TAD4 765 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 BORCS6Q96GS4 357 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 CABS1Q96KC9 395 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 TAS2R14Q9NYV8 317 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 VAV3Q9UKW4 847 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 BCS1LQ9Y276 419 aa21.02■□□□□ 0.96
SCARB1-201ENST00000261693 TRIM49P0CI25 452 aa21.01■□□□□ 0.95
SCARB1-201ENST00000261693 TRIM49CP0CI26 452 aa21.01■□□□□ 0.95
SCARB1-201ENST00000261693 VPS72Q15906 364 aa21.01■□□□□ 0.95
SCARB1-201ENST00000261693 CERKLQ49MI3 558 aaPredicted RBP21.01■□□□□ 0.95
SCARB1-201ENST00000261693 TPH2Q8IWU9 490 aa21.01■□□□□ 0.95
SCARB1-201ENST00000261693 CCDC13Q8IYE1 715 aa21.01■□□□□ 0.95
SCARB1-201ENST00000261693 GLG1Q92896 1179 aa21.01■□□□□ 0.95
SCARB1-201ENST00000261693 ARHGEF26Q96DR7 871 aa21.01■□□□□ 0.95
SCARB1-201ENST00000261693 COA1Q9GZY4 146 aa21.01■□□□□ 0.95
SCARB1-201ENST00000261693 ZMYM2Q9UBW7 1377 aa21.01■□□□□ 0.95
SCARB1-201ENST00000261693 GREB1LQ9C091 1923 aaPredicted RBP21.01■□□□□ 0.95
SCARB1-201ENST00000261693 FAM13AO94988 1023 aa21.01■□□□□ 0.95
SCARB1-201ENST00000261693 CYP2J2P51589 502 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms