RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 STAT2P52630 851 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 CTTNQ14247 550 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 PKDCCQ504Y2 493 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 CEP55Q53EZ4 464 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 TXNRD3NBQ6F5E7 133 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 TMCO2Q7Z6W1 182 aaPredicted RBP6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 GPIHBP1Q8IV16 184 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 HELQQ8TDG4 1101 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 NUP133Q8WUM0 1156 aa6.39□□□□□ -1.39
TOPBP1-201ENST00000260810 VPS37CA5D8V6 355 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 A6NJR5 290 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 SORBS3O60504 671 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 CD4P01730 458 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 TFE3P19532 575 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 OR5B17Q8NGF7 314 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 C11orf84Q9BUA3 381 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 PACSIN1Q9BY11 444 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 XPO4Q9C0E2 1151 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 VEZTQ9HBM0 779 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 USP25Q9UHP3 1055 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 NOCTQ9UK39 431 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 USP5P45974 858 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 CAPSQ13938 189 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 PDIA5Q14554 519 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 TSKSQ9UJT2 592 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 PDHXO00330 501 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 NRDCO43847 1150 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 MCM2P49736 904 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 EEF1DP3Q658K8 133 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 ARL6IP4Q66PJ3 421 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 CNTN6Q9UQ52 1028 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 C1QBPQ07021 282 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 CCDC174Q6PII3 467 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 ANKRD13CQ8N6S4 541 aa6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 LNX1Q8TBB1 728 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 NIFKQ9BYG3 293 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-201ENST00000260810 CUL9Q8IWT3 2517 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 CACNB2Q08289 660 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 EPHA7Q15375 998 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 UTP14CQ5TAP6 766 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 GPR142Q7Z601 462 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 PDILTQ8N807 584 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 RNF214Q8ND24 703 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 DYDC2Q96IM9 177 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 TRAF3IP3Q9Y228 551 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 MYBL2P10244 700 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 MAPTP10636 758 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 RABGGTBP53611 331 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 OGDHQ02218 1023 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 PPP1R15BQ5SWA1 713 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 FAM109BQ6ICB4 259 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 XKR5Q6UX68 686 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 PRPF38AQ8NAV1 312 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 SMG8Q8ND04 991 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 RUFY2Q8WXA3 655 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 RAD54LQ92698 747 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 TICRRQ7Z2Z1 1910 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 C3orf70A6NLC5 250 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 ASNSP08243 561 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 GTF2BQ00403 316 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 HOOK2Q96ED9 719 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 GREM1O60565 184 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 CLCN1P35523 988 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 USP11P51784 963 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 ZNF132P52740 706 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 MAP3K9P80192 1104 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 CYP4A11Q02928 519 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 KRT31Q15323 416 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 ZRSR1Q15695 479 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 JMYQ8N9B5 988 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 PROCA1Q8NCQ7 364 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 CAAP1Q9H8G2 361 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 ABCB6Q9NP58 842 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 CTNNA3Q9UI47 895 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 NUMBLQ9Y6R0 609 aa6.37□□□□□ -1.39
TOPBP1-201ENST00000260810 C10orf142B7Z368 130 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 F2P00734 622 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 EIF2AK2P19525 551 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 CES4AQ5XG92 561 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 HEATR3Q7Z4Q2 680 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 RALYLQ86SE5 291 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 CCDC17Q96LX7 622 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 UPF3AQ9H1J1 476 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 ST6GALNAC4Q9H4F1 302 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 MTMR7Q9Y216 660 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 FANCMQ8IYD8 2048 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 CEP192Q8TEP8 1941 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 GTF2E1P29083 439 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 PSMC4P43686 418 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 RAD51AP2Q09MP3 1159 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 SKOR2Q2VWA4 1001 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 CYP2C19P33261 490 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 PLCB4Q15147 1175 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 CDR2LQ86X02 465 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 ARHGEF19Q8IW93 802 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 CD101Q93033 1021 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 ZSCAN16Q9H4T2 348 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 COQ4Q9Y3A0 265 aa6.36□□□□□ -1.39
TOPBP1-201ENST00000260810 NUMA1Q14980 2115 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms