RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 IGBP1P78318 339 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 ZNF200P98182 395 aaPredicted RBP15.7■□□□□ 0.1
VPS25-201ENST00000253794 FAM160A1Q05DH4 1040 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 FAAP100Q0VG06 881 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 SNW1Q13573 536 aaKnown RBP15.7■□□□□ 0.1
VPS25-201ENST00000253794 TRIM71Q2Q1W2 868 aaKnown RBP15.7■□□□□ 0.1
VPS25-201ENST00000253794 RINT1Q6NUQ1 792 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 CNNM4Q6P4Q7 775 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 PADI6Q6TGC4 694 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 C1orf186Q6ZWK4 172 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 FMR1NBQ8N0W7 255 aaPredicted RBP15.7■□□□□ 0.1
VPS25-201ENST00000253794 ZNF710Q8N1W2 664 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 PDILTQ8N807 584 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 RETREG2Q8NC44 543 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 MCPH1Q8NEM0 835 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 PPP1R13LQ8WUF5 828 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 SLC7A3Q8WY07 619 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 CCDC43Q96MW1 224 aaKnown RBP15.7■□□□□ 0.1
VPS25-201ENST00000253794 PLIN2Q99541 437 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 HTATIP2Q9BUP3 242 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 TRPV6Q9H1D0 765 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 TNMDQ9H2S6 317 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 KBTBD4Q9NVX7 518 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 GOLGA6L22H0YM25 854 aa15.69■□□□□ 0.1
VPS25-201ENST00000253794 PQBP1O60828 265 aaKnown RBP15.69■□□□□ 0.1
VPS25-201ENST00000253794 PRPF40AO75400 957 aaKnown RBP15.69■□□□□ 0.1
VPS25-201ENST00000253794 SLFN14P0C7P3 912 aa15.69■□□□□ 0.1
VPS25-201ENST00000253794 CYP2C9P11712 490 aa15.69■□□□□ 0.1
VPS25-201ENST00000253794 SYKP43405 635 aa15.69■□□□□ 0.1
VPS25-201ENST00000253794 RGS19P49795 217 aa15.69■□□□□ 0.1
VPS25-201ENST00000253794 POLGP54098 1239 aaPredicted RBP15.69■□□□□ 0.1
VPS25-201ENST00000253794 MKRN4PQ13434 485 aaPredicted RBP15.69■□□□□ 0.1
VPS25-201ENST00000253794 EMC2Q15006 297 aa15.69■□□□□ 0.1
VPS25-201ENST00000253794 RUFY4Q6ZNE9 571 aa15.69■□□□□ 0.1
VPS25-201ENST00000253794 TRMT1LQ7Z2T5 733 aaKnown RBP15.69■□□□□ 0.1
VPS25-201ENST00000253794 KIAA0319LQ8IZA0 1049 aa15.69■□□□□ 0.1
VPS25-201ENST00000253794 NME8Q8N427 588 aa15.69■□□□□ 0.1
VPS25-201ENST00000253794 CAGE1Q8TC20 777 aa15.69■□□□□ 0.1
VPS25-201ENST00000253794 DHX38Q92620 1227 aaKnown RBP15.69■□□□□ 0.1
VPS25-201ENST00000253794 SH2D3AQ9BRG2 576 aa15.69■□□□□ 0.1
VPS25-201ENST00000253794 PANK2Q9BZ23 570 aa15.69■□□□□ 0.1
VPS25-201ENST00000253794 ATP6V0A4Q9HBG4 840 aa15.69■□□□□ 0.1
VPS25-201ENST00000253794 TBX21Q9UL17 535 aa15.69■□□□□ 0.1
VPS25-201ENST00000253794 PITPNM1O00562 1244 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 USO1O60763 962 aaKnown RBP15.68■□□□□ 0.1
VPS25-201ENST00000253794 ZNF202O95125 648 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 TMOD1P28289 359 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 MCM6Q14566 821 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 ARSHQ5FYA8 562 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 IER5Q5VY09 327 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 EFCAB12Q6NXP0 572 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 SV2BQ7L1I2 683 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 SH3RF1Q7Z6J0 888 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 ELOA2Q8IYF1 753 aaPredicted RBP15.68■□□□□ 0.1
VPS25-201ENST00000253794 TCP11Q8WWU5 503 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 DHX58Q96C10 678 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 TIGD1Q96MW7 591 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 MTRQ99707 1265 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 RUSC1Q9BVN2 902 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 LRRC27Q9C0I9 530 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 ATP11BQ9Y2G3 1177 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 KAT6AQ92794 2004 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 ALPK3Q96L96 1907 aa15.68■□□□□ 0.1
VPS25-201ENST00000253794 KIAA0355O15063 1070 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 MYL1P05976 194 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 CLTBP09497 229 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 ARL2P36404 184 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 DNM2P50570 870 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 CDC42EP1Q00587 391 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 MAPK7Q13164 816 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 LONRF3Q496Y0 759 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 FAM26DQ5JW98 314 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 KRBA2Q6ZNG9 492 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 GPBP1Q86WP2 473 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 CCDC155Q8N6L0 562 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 WNT8BQ93098 351 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 ZBTB10Q96DT7 871 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 NOC4LQ9BVI4 516 aaKnown RBP15.67■□□□□ 0.1
VPS25-201ENST00000253794 ODF2LQ9ULJ1 636 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 NOD1Q9Y239 953 aa15.67■□□□□ 0.1
VPS25-201ENST00000253794 TRIP12Q14669 1992 aaPredicted RBP15.66■□□□□ 0.1
VPS25-201ENST00000253794 LIG1P18858 919 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 MCM4P33991 863 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 CLCN3P51790 818 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 ZNF131P52739 623 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 AMPD3Q01432 767 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 POU5F1BQ06416 359 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 DRP2Q13474 957 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 BFSP2Q13515 415 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 KANK3Q6NY19 840 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 TRAF7Q6Q0C0 670 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 RSPH3Q86UC2 560 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 CEP57L1Q8IYX8 460 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 DAW1Q8N136 415 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 LRRC71Q8N4P6 559 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 PSPC1Q8WXF1 523 aaKnown RBP15.66■□□□□ 0.1
VPS25-201ENST00000253794 KIFAP3Q92845 792 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 KCNN1Q92952 543 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 MAP7D2Q96T17 732 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 C7orf25Q9BPX7 421 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms