RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 C7orf61Q8IZ16 206 aa25.39■■□□□ 1.66
APOE-201ENST00000252486 METTL13Q8N6R0 699 aa25.39■■□□□ 1.66
APOE-201ENST00000252486 IQUBQ8NA54 791 aa25.39■■□□□ 1.66
APOE-201ENST00000252486 MCPH1Q8NEM0 835 aa25.39■■□□□ 1.66
APOE-201ENST00000252486 TCP11Q8WWU5 503 aa25.39■■□□□ 1.66
APOE-201ENST00000252486 MRPS27Q92552 414 aaKnown RBP25.39■■□□□ 1.66
APOE-201ENST00000252486 SH2D3AQ9BRG2 576 aa25.39■■□□□ 1.66
APOE-201ENST00000252486 CUEDC2Q9H467 287 aa25.39■■□□□ 1.66
APOE-201ENST00000252486 ATP6V0A4Q9HBG4 840 aa25.39■■□□□ 1.66
APOE-201ENST00000252486 KCND2Q9NZV8 630 aa25.39■■□□□ 1.66
APOE-201ENST00000252486 A0A087WWV3 80 aa25.38■■□□□ 1.65
APOE-201ENST00000252486 FAM237AA0A1B0GTK4 181 aa25.38■■□□□ 1.65
APOE-201ENST00000252486 PITPNM1O00562 1244 aa25.38■■□□□ 1.65
APOE-201ENST00000252486 PLA2G4BP0C869 781 aa25.38■■□□□ 1.65
APOE-201ENST00000252486 LINC01465Q8N7H1 131 aa25.38■■□□□ 1.65
APOE-201ENST00000252486 SYT2Q8N9I0 419 aaPredicted RBP25.38■■□□□ 1.65
APOE-201ENST00000252486 LARP4BQ92615 738 aaKnown RBP25.38■■□□□ 1.65
APOE-201ENST00000252486 RAD54LQ92698 747 aa25.38■■□□□ 1.65
APOE-201ENST00000252486 MAP7D2Q96T17 732 aa25.38■■□□□ 1.65
APOE-201ENST00000252486 MTRQ99707 1265 aa25.38■■□□□ 1.65
APOE-201ENST00000252486 HIPK3Q9H422 1215 aa25.38■■□□□ 1.65
APOE-201ENST00000252486 KCNH3Q9ULD8 1083 aa25.38■■□□□ 1.65
APOE-201ENST00000252486 CYP11B2P19099 503 aa25.37■■□□□ 1.65
APOE-201ENST00000252486 EMC2Q15006 297 aa25.37■■□□□ 1.65
APOE-201ENST00000252486 PADI6Q6TGC4 694 aa25.37■■□□□ 1.65
APOE-201ENST00000252486 RUFY4Q6ZNE9 571 aa25.37■■□□□ 1.65
APOE-201ENST00000252486 PDILTQ8N807 584 aa25.37■■□□□ 1.65
APOE-201ENST00000252486 DHX38Q92620 1227 aaKnown RBP25.37■■□□□ 1.65
APOE-201ENST00000252486 NOC4LQ9BVI4 516 aaKnown RBP25.37■■□□□ 1.65
APOE-201ENST00000252486 TIPINQ9BVW5 301 aa25.37■■□□□ 1.65
APOE-201ENST00000252486 SUGCTQ9HAC7 445 aa25.37■■□□□ 1.65
APOE-201ENST00000252486 MAGEF1Q9HAY2 307 aa25.37■■□□□ 1.65
APOE-201ENST00000252486 PRDM5Q9NQX1 630 aaPredicted RBP25.37■■□□□ 1.65
APOE-201ENST00000252486 BLOC1S4Q9NUP1 217 aa25.37■■□□□ 1.65
APOE-201ENST00000252486 USP25Q9UHP3 1055 aa25.37■■□□□ 1.65
APOE-201ENST00000252486 USO1O60763 962 aaKnown RBP25.36■■□□□ 1.65
APOE-201ENST00000252486 SSBP05455 408 aaKnown RBP eCLIP25.36■■□□□ 1.65
APOE-201ENST00000252486 CDC42EP1Q00587 391 aa25.36■■□□□ 1.65
APOE-201ENST00000252486 TRIM71Q2Q1W2 868 aaKnown RBP25.36■■□□□ 1.65
APOE-201ENST00000252486 IER5Q5VY09 327 aa25.36■■□□□ 1.65
APOE-201ENST00000252486 KIAA0319LQ8IZA0 1049 aa25.36■■□□□ 1.65
APOE-201ENST00000252486 FSIP1Q8NA03 581 aa25.36■■□□□ 1.65
APOE-201ENST00000252486 DNAJB3Q8WWF6 145 aa25.36■■□□□ 1.65
APOE-201ENST00000252486 PANK2Q9BZ23 570 aa25.36■■□□□ 1.65
APOE-201ENST00000252486 FAM49AQ9H0Q0 323 aaPredicted RBP25.36■■□□□ 1.65
APOE-201ENST00000252486 HPSEQ9Y251 543 aa25.36■■□□□ 1.65
APOE-201ENST00000252486 A0A087X0B3 334 aa25.35■■□□□ 1.65
APOE-201ENST00000252486 M0QZ92 97 aa25.35■■□□□ 1.65
APOE-201ENST00000252486 POLR2DO15514 142 aaKnown RBP25.35■■□□□ 1.65
APOE-201ENST00000252486 PARNO95453 639 aaKnown RBP25.35■■□□□ 1.65
APOE-201ENST00000252486 PFKFB1P16118 471 aa25.35■■□□□ 1.65
APOE-201ENST00000252486 THPOP40225 353 aa25.35■■□□□ 1.65
APOE-201ENST00000252486 CLCN3P51790 818 aa25.35■■□□□ 1.65
APOE-201ENST00000252486 SLC12A3P55017 1021 aa25.35■■□□□ 1.65
APOE-201ENST00000252486 LRRC71Q8N4P6 559 aa25.35■■□□□ 1.65
APOE-201ENST00000252486 ZBTB10Q96DT7 871 aa25.35■■□□□ 1.65
APOE-201ENST00000252486 A0A1B0GVL5 298 aa25.34■■□□□ 1.65
APOE-201ENST00000252486 ASAP2O43150 1006 aa25.34■■□□□ 1.65
APOE-201ENST00000252486 TIMP1P01033 207 aa25.34■■□□□ 1.65
APOE-201ENST00000252486 CKBP12277 381 aa25.34■■□□□ 1.65
APOE-201ENST00000252486 RAG1P15918 1043 aa25.34■■□□□ 1.65
APOE-201ENST00000252486 SYKP43405 635 aa25.34■■□□□ 1.65
APOE-201ENST00000252486 MCM6Q14566 821 aa25.34■■□□□ 1.65
APOE-201ENST00000252486 RINT1Q6NUQ1 792 aa25.34■■□□□ 1.65
APOE-201ENST00000252486 SV2BQ7L1I2 683 aa25.34■■□□□ 1.65
APOE-201ENST00000252486 PSPC1Q8WXF1 523 aaKnown RBP25.34■■□□□ 1.65
APOE-201ENST00000252486 WNT8BQ93098 351 aa25.34■■□□□ 1.65
APOE-201ENST00000252486 DHX58Q96C10 678 aa25.34■■□□□ 1.65
APOE-201ENST00000252486 LRRC27Q9C0I9 530 aa25.34■■□□□ 1.65
APOE-201ENST00000252486 SUCLA2Q9P2R7 463 aaPredicted RBP25.34■■□□□ 1.65
APOE-201ENST00000252486 AKT3Q9Y243 479 aa25.34■■□□□ 1.65
APOE-201ENST00000252486 TRIM43BA6NCK2 446 aa25.33■■□□□ 1.65
APOE-201ENST00000252486 GOLGA6L22H0YM25 854 aa25.33■■□□□ 1.65
APOE-201ENST00000252486 SELPP16109 830 aa25.33■■□□□ 1.65
APOE-201ENST00000252486 GUCY2CP25092 1073 aa25.33■■□□□ 1.65
APOE-201ENST00000252486 E2F4Q16254 413 aa25.33■■□□□ 1.65
APOE-201ENST00000252486 NAALADL2Q58DX5 795 aa25.33■■□□□ 1.65
APOE-201ENST00000252486 FAM26DQ5JW98 314 aa25.33■■□□□ 1.65
APOE-201ENST00000252486 C1orf186Q6ZWK4 172 aa25.33■■□□□ 1.65
APOE-201ENST00000252486 SH3RF1Q7Z6J0 888 aa25.33■■□□□ 1.65
APOE-201ENST00000252486 LRRC15Q8TF66 581 aa25.33■■□□□ 1.65
APOE-201ENST00000252486 TRIM43Q96BQ3 446 aaPredicted RBP25.33■■□□□ 1.65
APOE-201ENST00000252486 TNMDQ9H2S6 317 aa25.33■■□□□ 1.65
APOE-201ENST00000252486 XPNPEP1Q9NQW7 623 aa25.33■■□□□ 1.65
APOE-201ENST00000252486 EVPLQ92817 2033 aa25.32■■□□□ 1.64
APOE-201ENST00000252486 DNAH12Q6ZR08 3092 aa25.32■■□□□ 1.64
APOE-201ENST00000252486 NDUFA8P51970 172 aa25.32■■□□□ 1.64
APOE-201ENST00000252486 UBE2HP62256 183 aa25.32■■□□□ 1.64
APOE-201ENST00000252486 MRPS6P82932 125 aaKnown RBP25.32■■□□□ 1.64
APOE-201ENST00000252486 AMPD3Q01432 767 aa25.32■■□□□ 1.64
APOE-201ENST00000252486 MXD4Q14582 209 aaPredicted RBP25.32■■□□□ 1.64
APOE-201ENST00000252486 LRRC8DQ7L1W4 858 aa25.32■■□□□ 1.64
APOE-201ENST00000252486 GPBP1Q86WP2 473 aa25.32■■□□□ 1.64
APOE-201ENST00000252486 CEP57L1Q8IYX8 460 aa25.32■■□□□ 1.64
APOE-201ENST00000252486 KIFAP3Q92845 792 aa25.32■■□□□ 1.64
APOE-201ENST00000252486 CCDC34Q96HJ3 373 aa25.32■■□□□ 1.64
APOE-201ENST00000252486 BMP2KQ9NSY1 1161 aaPredicted RBP25.32■■□□□ 1.64
APOE-201ENST00000252486 MLLT1Q03111 559 aaPredicted RBP25.31■■□□□ 1.64
APOE-201ENST00000252486 MKRN4PQ13434 485 aaPredicted RBP25.31■■□□□ 1.64
APOE-201ENST00000252486 TMEM143Q96AN5 459 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms