RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 RBM46Q8TBY0 533 aaKnown RBP23.74■■□□□ 1.39
CLN6-201ENST00000249806 TRERF1Q96PN7 1200 aa23.74■■□□□ 1.39
CLN6-201ENST00000249806 ALS2CR12Q96Q35 445 aa23.74■■□□□ 1.39
CLN6-201ENST00000249806 SIX2Q9NPC8 291 aa23.74■■□□□ 1.39
CLN6-201ENST00000249806 CTDP1Q9Y5B0 961 aaPredicted RBP23.74■■□□□ 1.39
CLN6-201ENST00000249806 NCK2O43639 380 aa23.74■■□□□ 1.39
CLN6-201ENST00000249806 CXCR5P32302 372 aa23.74■■□□□ 1.39
CLN6-201ENST00000249806 CYP2J2P51589 502 aa23.74■■□□□ 1.39
CLN6-201ENST00000249806 PTK2Q05397 1052 aa23.74■■□□□ 1.39
CLN6-201ENST00000249806 PGM5Q15124 567 aa23.74■■□□□ 1.39
CLN6-201ENST00000249806 NIPA1Q7RTP0 329 aa23.74■■□□□ 1.39
CLN6-201ENST00000249806 GCNT4Q9P109 453 aa23.74■■□□□ 1.39
CLN6-201ENST00000249806 RIPK3Q9Y572 518 aa23.74■■□□□ 1.39
CLN6-201ENST00000249806 USP14P54578 494 aa23.73■■□□□ 1.39
CLN6-201ENST00000249806 CKAP4Q07065 602 aaKnown RBP23.73■■□□□ 1.39
CLN6-201ENST00000249806 NFRKBQ6P4R8 1299 aa23.73■■□□□ 1.39
CLN6-201ENST00000249806 NEK9Q8TD19 979 aa23.73■■□□□ 1.39
CLN6-201ENST00000249806 PACSIN1Q9BY11 444 aa23.73■■□□□ 1.39
CLN6-201ENST00000249806 GBP3Q9H0R5 595 aa23.73■■□□□ 1.39
CLN6-201ENST00000249806 AGPAT3Q9NRZ7 376 aa23.73■■□□□ 1.39
CLN6-201ENST00000249806 ATP9AO75110 1047 aa23.72■■□□□ 1.39
CLN6-201ENST00000249806 KLRC1P26715 233 aa23.72■■□□□ 1.39
CLN6-201ENST00000249806 NSMFQ6X4W1 530 aa23.72■■□□□ 1.39
CLN6-201ENST00000249806 HS2ST1Q7LGA3 356 aa23.72■■□□□ 1.39
CLN6-201ENST00000249806 ZNF571Q7Z3V5 609 aaPredicted RBP23.72■■□□□ 1.39
CLN6-201ENST00000249806 ATG4CQ96DT6 458 aa23.72■■□□□ 1.39
CLN6-201ENST00000249806 NOX5Q96PH1 765 aa23.72■■□□□ 1.39
CLN6-201ENST00000249806 RMDN3Q96TC7 470 aa23.72■■□□□ 1.39
CLN6-201ENST00000249806 TMEM150BA6NC51 233 aa23.72■■□□□ 1.39
CLN6-201ENST00000249806 VWA5AO00534 786 aa23.72■■□□□ 1.39
CLN6-201ENST00000249806 ZBED4O75132 1171 aa23.72■■□□□ 1.39
CLN6-201ENST00000249806 NFIL3Q16649 462 aa23.72■■□□□ 1.39
CLN6-201ENST00000249806 GINM1Q9NU53 330 aa23.72■■□□□ 1.39
CLN6-201ENST00000249806 KIAA0753Q2KHM9 967 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 RNF207Q6ZRF8 634 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 STXBP4Q6ZWJ1 553 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 RNF10Q8N5U6 811 aaKnown RBP23.71■■□□□ 1.39
CLN6-201ENST00000249806 OSBPL9Q96SU4 736 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 STRA6Q9BX79 667 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 DMAC2Q9NW81 257 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 FZD9O00144 591 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 QARSP47897 775 aaKnown RBP23.71■■□□□ 1.39
CLN6-201ENST00000249806 RARRES1P49788 294 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 BACE1P56817 501 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 C2orf54Q08AI8 447 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 DNAAF5Q86Y56 855 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 SYCP3Q8IZU3 236 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 TXLNBQ8N3L3 684 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 RDH13Q8NBN7 331 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 ZBTB9Q96C00 473 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 RPGRIP1Q96KN7 1286 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 TLR10Q9BXR5 811 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 MTFR1LQ9H019 292 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 L1RE1Q9UN81 338 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 LOXHD1Q8IVV2 1947 aa23.71■■□□□ 1.39
CLN6-201ENST00000249806 MAP2K7O14733 419 aa23.7■■□□□ 1.38
CLN6-201ENST00000249806 ERLIN1O75477 346 aa23.7■■□□□ 1.38
CLN6-201ENST00000249806 PPP1R37O75864 691 aa23.7■■□□□ 1.38
CLN6-201ENST00000249806 GABPB1Q06547 395 aaPredicted RBP23.7■■□□□ 1.38
CLN6-201ENST00000249806 NAB2Q15742 525 aa23.7■■□□□ 1.38
CLN6-201ENST00000249806 UGCGQ16739 394 aa23.7■■□□□ 1.38
CLN6-201ENST00000249806 PDCD2LQ9BRP1 358 aa23.7■■□□□ 1.38
CLN6-201ENST00000249806 UBXN6Q9BZV1 441 aa23.7■■□□□ 1.38
CLN6-201ENST00000249806 PXMP2Q9NR77 195 aa23.7■■□□□ 1.38
CLN6-201ENST00000249806 MAP3K20Q9NYL2 800 aaKnown RBP23.7■■□□□ 1.38
CLN6-201ENST00000249806 UBE4BO95155 1302 aa23.7■■□□□ 1.38
CLN6-201ENST00000249806 PPP1R12BO60237 982 aaPredicted RBP23.69■■□□□ 1.38
CLN6-201ENST00000249806 PRLRP16471 622 aa23.69■■□□□ 1.38
CLN6-201ENST00000249806 WDR93Q6P2C0 686 aa23.69■■□□□ 1.38
CLN6-201ENST00000249806 WRNIP1Q96S55 665 aa23.69■■□□□ 1.38
CLN6-201ENST00000249806 TBC1D22BQ9NU19 505 aa23.69■■□□□ 1.38
CLN6-201ENST00000249806 SMARCAL1Q9NZC9 954 aa23.69■■□□□ 1.38
CLN6-201ENST00000249806 EHD2Q9NZN4 543 aa23.69■■□□□ 1.38
CLN6-201ENST00000249806 FRMD4BQ9Y2L6 1034 aa23.69■■□□□ 1.38
CLN6-201ENST00000249806 TESPA1A2RU30 521 aaPredicted RBP23.69■■□□□ 1.38
CLN6-201ENST00000249806 K7ENM7 598 aa23.69■■□□□ 1.38
CLN6-201ENST00000249806 DMTNQ08495 405 aa23.69■■□□□ 1.38
CLN6-201ENST00000249806 SMC1AQ14683 1233 aaKnown RBP23.69■■□□□ 1.38
CLN6-201ENST00000249806 UTP14CQ5TAP6 766 aaKnown RBP23.69■■□□□ 1.38
CLN6-201ENST00000249806 IQCEQ6IPM2 695 aa23.69■■□□□ 1.38
CLN6-201ENST00000249806 SCYL3Q8IZE3 742 aa23.69■■□□□ 1.38
CLN6-201ENST00000249806 MKNK1Q9BUB5 465 aa23.69■■□□□ 1.38
CLN6-201ENST00000249806 LUC7LQ9NQ29 371 aaKnown RBP23.69■■□□□ 1.38
CLN6-201ENST00000249806 GTPBP10A4D1E9 387 aaKnown RBP23.68■■□□□ 1.38
CLN6-201ENST00000249806 TISP43B9A030 160 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 PALMO75781 387 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 ZMYND10O75800 440 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 TRIM49P0CI25 452 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 TRIM49CP0CI26 452 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 PTPRAP18433 802 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 YWHABP31946 246 aaKnown RBP23.68■■□□□ 1.38
CLN6-201ENST00000249806 FMO5P49326 533 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 JAM2P57087 298 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 BAATQ14032 418 aaPredicted RBP23.68■■□□□ 1.38
CLN6-201ENST00000249806 CBWD6Q4V339 395 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 CBWD3Q5JTY5 395 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 CBWD5Q5RIA9 395 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 ARHGEF16Q5VV41 709 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 HYOU1Q9Y4L1 999 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 TERF2Q15554 542 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms