RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 COLQQ9Y215 455 aaPredicted RBP14.36□□□□□ -0.11
LSM8-201ENST00000249299 COL1A2P08123 1366 aa14.36□□□□□ -0.11
LSM8-201ENST00000249299 TBCAO75347 108 aaKnown RBP14.35□□□□□ -0.11
LSM8-201ENST00000249299 F2P00734 622 aa14.35□□□□□ -0.11
LSM8-201ENST00000249299 CST5P28325 142 aaPredicted RBP14.35□□□□□ -0.11
LSM8-201ENST00000249299 GRK4P32298 578 aa14.35□□□□□ -0.11
LSM8-201ENST00000249299 IRX5P78411 483 aaPredicted RBP14.35□□□□□ -0.11
LSM8-201ENST00000249299 ALCAMQ13740 583 aa14.35□□□□□ -0.11
LSM8-201ENST00000249299 DHX8Q14562 1220 aaKnown RBP14.35□□□□□ -0.11
LSM8-201ENST00000249299 ZNF484Q5JVG2 852 aa14.35□□□□□ -0.11
LSM8-201ENST00000249299 TMEM63BQ5T3F8 832 aa14.35□□□□□ -0.11
LSM8-201ENST00000249299 FAM200AQ8TCP9 573 aa14.35□□□□□ -0.11
LSM8-201ENST00000249299 SLC7A3Q8WY07 619 aa14.35□□□□□ -0.11
LSM8-201ENST00000249299 REEP2Q9BRK0 252 aa14.35□□□□□ -0.11
LSM8-201ENST00000249299 C16orf70Q9BSU1 422 aa14.35□□□□□ -0.11
LSM8-201ENST00000249299 KATNAL1Q9BW62 490 aa14.35□□□□□ -0.11
LSM8-201ENST00000249299 DHX33Q9H6R0 707 aaKnown RBP14.35□□□□□ -0.11
LSM8-201ENST00000249299 PARVGQ9HBI0 331 aa14.35□□□□□ -0.11
LSM8-201ENST00000249299 LARSQ9P2J5 1176 aaKnown RBP14.35□□□□□ -0.11
LSM8-201ENST00000249299 TRIM17Q9Y577 477 aa14.35□□□□□ -0.11
LSM8-201ENST00000249299 FSD2A1L4K1 749 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 H3BRB1 525 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 ZBTB39O15060 712 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 MAGEB2O15479 319 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 ADCY6O43306 1168 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 FAM13AO94988 1023 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 IDEP14735 1019 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 BMP6P22004 513 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 ZNF165P49910 485 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 PLCB4Q15147 1175 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 PKN2Q16513 984 aaKnown RBP14.34□□□□□ -0.11
LSM8-201ENST00000249299 FSCN1Q16658 493 aaKnown RBP14.34□□□□□ -0.11
LSM8-201ENST00000249299 DPCR1Q3MIW9 517 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 HERC4Q5GLZ8 1057 aaPredicted RBP14.34□□□□□ -0.11
LSM8-201ENST00000249299 UTP14CQ5TAP6 766 aaKnown RBP14.34□□□□□ -0.11
LSM8-201ENST00000249299 STXBP4Q6ZWJ1 553 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 DYMQ7RTS9 669 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 GUF1Q8N442 669 aaKnown RBP14.34□□□□□ -0.11
LSM8-201ENST00000249299 FBXO22Q8NEZ5 403 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 SLC39A7Q92504 469 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 ERCC4Q92889 916 aaPredicted RBP14.34□□□□□ -0.11
LSM8-201ENST00000249299 DHTKD1Q96HY7 919 aaPredicted RBP14.34□□□□□ -0.11
LSM8-201ENST00000249299 CEP89Q96ST8 783 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 NTPCRQ9BSD7 190 aaKnown RBP14.34□□□□□ -0.11
LSM8-201ENST00000249299 ST6GALNAC4Q9H4F1 302 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 TUT1Q9H6E5 874 aaKnown RBP14.34□□□□□ -0.11
LSM8-201ENST00000249299 ATP6V0A4Q9HBG4 840 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 SEPT9Q9UHD8 586 aaPredicted RBP14.34□□□□□ -0.11
LSM8-201ENST00000249299 PTPN22Q9Y2R2 807 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 TELO2Q9Y4R8 837 aa14.34□□□□□ -0.11
LSM8-201ENST00000249299 LOXHD1Q8IVV2 1947 aa14.33□□□□□ -0.11
LSM8-201ENST00000249299 MCM3APO60318 1980 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 RRN3P2A6NIE6 340 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 SMTNL1A8MU46 457 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 H0YCG3 227 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 BIN1O00499 593 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 IKBKBO14920 756 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 SORBS3O60504 671 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 MAFO75444 373 aaPredicted RBP14.33□□□□□ -0.12
LSM8-201ENST00000249299 CASP1P29466 404 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 COASYQ13057 564 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 UVSSAQ2YD98 709 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 ANO6Q4KMQ2 910 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 FAM26FQ5R3K3 315 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 GJC2Q5T442 439 aaPredicted RBP14.33□□□□□ -0.12
LSM8-201ENST00000249299 IER5LQ5T953 404 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 ZNF710Q8N1W2 664 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 SPIRE2Q8WWL2 714 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 HMX1Q9NP08 348 aaPredicted RBP14.33□□□□□ -0.12
LSM8-201ENST00000249299 DDX20Q9UHI6 824 aaKnown RBP14.33□□□□□ -0.12
LSM8-201ENST00000249299 PCDHA2Q9Y5H9 948 aa14.33□□□□□ -0.12
LSM8-201ENST00000249299 IGKV6-21A0A0C4DH24 114 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 GOLGA6L3A6NEY3 463 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 HAS3O00219 553 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 PSMA7O14818 248 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 EIF3DO15371 548 aaKnown RBP eCLIP14.32□□□□□ -0.12
LSM8-201ENST00000249299 CABYRO75952 493 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 PLS3P13797 630 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 ELNP15502 786 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 CAPN2P17655 700 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 POLGP54098 1239 aaPredicted RBP14.32□□□□□ -0.12
LSM8-201ENST00000249299 NPEPPSP55786 919 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 MAPK7Q13164 816 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 PPP2R5AQ15172 486 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 GAS2L3Q86XJ1 694 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 ADSSL1Q8N142 457 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 PCSK9Q8NBP7 692 aaKnown RBP14.32□□□□□ -0.12
LSM8-201ENST00000249299 KLHDC9Q8NEP7 349 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 ENOX1Q8TC92 643 aaKnown RBP14.32□□□□□ -0.12
LSM8-201ENST00000249299 TCP11Q8WWU5 503 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 METRNQ9UJH8 293 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 UBE4BO95155 1302 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 PHLPP2Q6ZVD8 1323 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 NRCAMQ92823 1304 aa14.32□□□□□ -0.12
LSM8-201ENST00000249299 A0A087WWV3 80 aa14.31□□□□□ -0.12
LSM8-201ENST00000249299 PPP1R3GB7ZBB8 358 aa14.31□□□□□ -0.12
LSM8-201ENST00000249299 ASAP2O43150 1006 aa14.31□□□□□ -0.12
LSM8-201ENST00000249299 USO1O60763 962 aaKnown RBP14.31□□□□□ -0.12
LSM8-201ENST00000249299 HIP1RO75146 1068 aa14.31□□□□□ -0.12
LSM8-201ENST00000249299 ADAMTS4O75173 837 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms