RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 EDRF1Q3B7T1 1238 aa20.65■□□□□ 0.9
TNFSF9-201ENST00000245817 SPECC1LQ69YQ0 1117 aa20.65■□□□□ 0.9
TNFSF9-201ENST00000245817 APTXQ7Z2E3 356 aaKnown RBP20.65■□□□□ 0.9
TNFSF9-201ENST00000245817 MCPH1Q8NEM0 835 aa20.65■□□□□ 0.9
TNFSF9-201ENST00000245817 AFAP1L1Q8TED9 768 aa20.65■□□□□ 0.9
TNFSF9-201ENST00000245817 KIFAP3Q92845 792 aa20.65■□□□□ 0.9
TNFSF9-201ENST00000245817 GLG1Q92896 1179 aa20.65■□□□□ 0.9
TNFSF9-201ENST00000245817 EEF2KMTQ96G04 330 aa20.65■□□□□ 0.9
TNFSF9-201ENST00000245817 CEP63Q96MT8 703 aa20.65■□□□□ 0.9
TNFSF9-201ENST00000245817 GPR20Q99678 358 aa20.65■□□□□ 0.9
TNFSF9-201ENST00000245817 TINF2Q9BSI4 451 aa20.65■□□□□ 0.9
TNFSF9-201ENST00000245817 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.65■□□□□ 0.93e-6■□□□□ 9.7
TNFSF9-201ENST00000245817 ZNFX1Q9P2E3 1918 aaKnown RBP20.65■□□□□ 0.9
TNFSF9-201ENST00000245817 PLXNB2O15031 1838 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 ESPNB1AK53 854 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 K7ENM7 598 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 PDXKO00764 312 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 STBD1O95210 358 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 GNA14O95837 355 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 SMTNP53814 917 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 MAP2K1Q02750 393 aaPredicted RBP20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 LAMC2Q13753 1193 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 CCDC144BQ3MJ40 725 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 MTERF2Q49AM1 385 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 ZCWPW2Q504Y3 356 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 DAW1Q8N136 415 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 FAM167AQ96KS9 214 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 ZNF830Q96NB3 372 aaPredicted RBP20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 TUBGCP2Q9BSJ2 902 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 ATP6V0A4Q9HBG4 840 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 INTS13Q9NVM9 706 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 ZKSCAN5Q9Y2L8 839 aa20.64■□□□□ 0.9
TNFSF9-201ENST00000245817 CETN3O15182 167 aa20.64■□□□□ 0.89
TNFSF9-201ENST00000245817 CA12O43570 354 aa20.64■□□□□ 0.89
TNFSF9-201ENST00000245817 GH1P01241 217 aa20.64■□□□□ 0.89
TNFSF9-201ENST00000245817 RPL13P26373 211 aaKnown RBP20.64■□□□□ 0.89
TNFSF9-201ENST00000245817 POLGP54098 1239 aaPredicted RBP20.64■□□□□ 0.89
TNFSF9-201ENST00000245817 CRHR2Q13324 411 aa20.64■□□□□ 0.89
TNFSF9-201ENST00000245817 ADAM9Q13443 819 aa20.64■□□□□ 0.89
TNFSF9-201ENST00000245817 HSDL1Q3SXM5 330 aa20.64■□□□□ 0.89
TNFSF9-201ENST00000245817 MORN1Q5T089 497 aa20.64■□□□□ 0.89
TNFSF9-201ENST00000245817 TAPT1Q6NXT6 567 aa20.64■□□□□ 0.89
TNFSF9-201ENST00000245817 CCDC150Q8NCX0 1101 aa20.64■□□□□ 0.89
TNFSF9-201ENST00000245817 ABHD16BQ9H3Z7 469 aa20.64■□□□□ 0.89
TNFSF9-201ENST00000245817 TYW1Q9NV66 732 aaKnown RBP20.64■□□□□ 0.89
TNFSF9-201ENST00000245817 TRAF3IP3Q9Y228 551 aa20.64■□□□□ 0.89
TNFSF9-201ENST00000245817 NRDCO43847 1150 aa20.63■□□□□ 0.89
TNFSF9-201ENST00000245817 SNAI1O95863 264 aaPredicted RBP20.63■□□□□ 0.89
TNFSF9-201ENST00000245817 UBXN1Q04323 297 aa20.63■□□□□ 0.89
TNFSF9-201ENST00000245817 DMP1Q13316 513 aaPredicted RBP20.63■□□□□ 0.89
TNFSF9-201ENST00000245817 NPLOC4Q8TAT6 608 aa20.63■□□□□ 0.89
TNFSF9-201ENST00000245817 COPS5Q92905 334 aa20.63■□□□□ 0.89
TNFSF9-201ENST00000245817 NOC4LQ9BVI4 516 aaKnown RBP20.63■□□□□ 0.89
TNFSF9-201ENST00000245817 C17orf75Q9HAS0 396 aa20.63■□□□□ 0.89
TNFSF9-201ENST00000245817 KCNG1Q9UIX4 513 aa20.63■□□□□ 0.89
TNFSF9-201ENST00000245817 RBM47A0AV96 593 aaKnown RBP20.62■□□□□ 0.89
TNFSF9-201ENST00000245817 TEX33O43247 280 aa20.62■□□□□ 0.89
TNFSF9-201ENST00000245817 CCDC40Q4G0X9 1142 aa20.62■□□□□ 0.89
TNFSF9-201ENST00000245817 ZC2HC1CQ53FD0 456 aaPredicted RBP20.62■□□□□ 0.89
TNFSF9-201ENST00000245817 HS2ST1Q7LGA3 356 aa20.62■□□□□ 0.89
TNFSF9-201ENST00000245817 PLPPR4Q7Z2D5 763 aa20.62■□□□□ 0.89
TNFSF9-201ENST00000245817 SYCP3Q8IZU3 236 aa20.62■□□□□ 0.89
TNFSF9-201ENST00000245817 PCYT2Q99447 389 aa20.62■□□□□ 0.89
TNFSF9-201ENST00000245817 BEGAINQ9BUH8 593 aa20.62■□□□□ 0.89
TNFSF9-201ENST00000245817 NIFKQ9BYG3 293 aaKnown RBP20.62■□□□□ 0.89
TNFSF9-201ENST00000245817 ZHX1Q9UKY1 873 aaPredicted RBP20.62■□□□□ 0.89
TNFSF9-201ENST00000245817 LRRC37A2A6NM11 1700 aa20.62■□□□□ 0.89
TNFSF9-201ENST00000245817 TNPO2O14787 897 aaKnown RBP20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 ATP4AP20648 1035 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 SFPQP23246 707 aaKnown RBP eCLIP20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 NR2F2P24468 414 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 SLC26A2P50443 739 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 PEX3P56589 373 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 ACVR2BQ13705 512 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 LRRC55Q6ZSA7 311 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 LRRC8AQ8IWT6 810 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 SOCS4Q8WXH5 440 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 SLC7A3Q8WY07 619 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 IFT74Q96LB3 600 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 FIZ1Q96SL8 496 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 SMARCAD1Q9H4L7 1026 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 TMEM206Q9H813 350 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 GPRC5CQ9NQ84 441 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 RNF186Q9NXI6 227 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 PPME1Q9Y570 386 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 DOCK5Q9H7D0 1870 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 CCDC169A6NNP5 214 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 LGALS16A8MUM7 142 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 LGR5O75473 907 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 TRPA1O75762 1119 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 TPM1P09493 284 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 RFC5P40937 340 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 RGS2P41220 211 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 ADCYAP1R1P41586 468 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 DNM2P50570 870 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 FKBP15Q5T1M5 1219 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 IQSEC1Q6DN90 963 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 PPFIBP1Q86W92 1011 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 GOLGA5Q8TBA6 731 aa20.61■□□□□ 0.89
TNFSF9-201ENST00000245817 BBXQ8WY36 941 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms