RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 LRRC71Q8N4P6 559 aa11.89□□□□□ -0.51
PFDN5-201ENST00000243040 METTL13Q8N6R0 699 aa11.89□□□□□ -0.51
PFDN5-201ENST00000243040 ERMNQ8TAM6 284 aa11.89□□□□□ -0.51
PFDN5-201ENST00000243040 MAP7D2Q96T17 732 aa11.89□□□□□ -0.51
PFDN5-201ENST00000243040 IFIH1Q9BYX4 1025 aaKnown RBP11.89□□□□□ -0.51
PFDN5-201ENST00000243040 RAB34Q9BZG1 259 aa11.89□□□□□ -0.51
PFDN5-201ENST00000243040 DHX33Q9H6R0 707 aaKnown RBP11.89□□□□□ -0.51
PFDN5-201ENST00000243040 ANKEF1Q9NU02 776 aa11.89□□□□□ -0.51
PFDN5-201ENST00000243040 FOXD4L1Q9NU39 408 aa11.89□□□□□ -0.51
PFDN5-201ENST00000243040 STK24Q9Y6E0 443 aa11.89□□□□□ -0.51
PFDN5-201ENST00000243040 SLC4A7Q9Y6M7 1214 aa11.89□□□□□ -0.51
PFDN5-201ENST00000243040 CDH23Q9H251 3354 aa11.89□□□□□ -0.51
PFDN5-201ENST00000243040 TTC3P53804 2025 aa11.88□□□□□ -0.51
PFDN5-201ENST00000243040 GPR32O75388 356 aa11.88□□□□□ -0.51
PFDN5-201ENST00000243040 MED24O75448 989 aa11.88□□□□□ -0.51
PFDN5-201ENST00000243040 VTNP04004 478 aa11.88□□□□□ -0.51
PFDN5-201ENST00000243040 XRCC6P12956 609 aaKnown RBP eCLIP11.88□□□□□ -0.51
PFDN5-201ENST00000243040 ATP2A2P16615 1042 aaKnown RBP11.88□□□□□ -0.51
PFDN5-201ENST00000243040 RFC5P40937 340 aa11.88□□□□□ -0.51
PFDN5-201ENST00000243040 KCNJ6P48051 423 aa11.88□□□□□ -0.51
PFDN5-201ENST00000243040 CRYBB1P53674 252 aaPredicted RBP11.88□□□□□ -0.51
PFDN5-201ENST00000243040 NPEPPSP55786 919 aa11.88□□□□□ -0.51
PFDN5-201ENST00000243040 FERMT3Q86UX7 667 aa11.88□□□□□ -0.51
PFDN5-201ENST00000243040 CATSPER3Q86XQ3 398 aa11.88□□□□□ -0.51
PFDN5-201ENST00000243040 TPH2Q8IWU9 490 aa11.88□□□□□ -0.51
PFDN5-201ENST00000243040 CEP170P1Q96L14 293 aa11.88□□□□□ -0.51
PFDN5-201ENST00000243040 ZSCAN16Q9H4T2 348 aaPredicted RBP11.88□□□□□ -0.51
PFDN5-201ENST00000243040 LRWD1Q9UFC0 647 aa11.88□□□□□ -0.51
PFDN5-201ENST00000243040 AKT3Q9Y243 479 aa11.88□□□□□ -0.51
PFDN5-201ENST00000243040 RALGAPA2Q2PPJ7 1873 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 NLRC5Q86WI3 1866 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 HSP90AA1P07900 732 aaKnown RBP11.87□□□□□ -0.51
PFDN5-201ENST00000243040 DNAJB2P25686 324 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 RARRES1P49788 294 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 GPC3P51654 580 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 DEFB103AP81534 67 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 CDC42EP1Q00587 391 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 DRP2Q13474 957 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 RAB30Q15771 203 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 IL17AQ16552 155 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 DTHD1Q6ZMT9 781 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 ZNF579Q8NAF0 562 aaKnown RBP11.87□□□□□ -0.51
PFDN5-201ENST00000243040 TMEM40Q8WWA1 233 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 SLC7A3Q8WY07 619 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 OSMRQ99650 979 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 SH2D3AQ9BRG2 576 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 PBX4Q9BYU1 374 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 ADAMTS10Q9H324 1103 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 AGO3Q9H9G7 860 aaKnown RBP11.87□□□□□ -0.51
PFDN5-201ENST00000243040 SUGCTQ9HAC7 445 aa11.87□□□□□ -0.51
PFDN5-201ENST00000243040 DBR1Q9UK59 544 aaKnown RBP11.87□□□□□ -0.51
PFDN5-201ENST00000243040 MORC2Q9Y6X9 1032 aaPredicted RBP11.87□□□□□ -0.51
PFDN5-201ENST00000243040 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.86□□□□□ -0.51
PFDN5-201ENST00000243040 GRXCR1A8MXD5 290 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 ZBTB39O15060 712 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 DGAT1O75907 488 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 CD52P31358 61 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 DNM2P50570 870 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 POLGP54098 1239 aaPredicted RBP11.86□□□□□ -0.51
PFDN5-201ENST00000243040 NLRP11P59045 1033 aaKnown RBP11.86□□□□□ -0.51
PFDN5-201ENST00000243040 PAK2Q13177 524 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 EMC2Q15006 297 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 SF3A1Q15459 793 aaKnown RBP11.86□□□□□ -0.51
PFDN5-201ENST00000243040 KIZQ2M2Z5 673 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 XKR9Q5GH70 373 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 ODR4Q5SWX8 454 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 POTEGQ6S5H5 508 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 ZNF410Q86VK4 478 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 FAM228AQ86W67 206 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 HERC6Q8IVU3 1022 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 SNX29Q8TEQ0 813 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 TCP11Q8WWU5 503 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 NACC1Q96RE7 527 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 FTHL17Q9BXU8 183 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 CDHR5Q9HBB8 845 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 ERVK-5Q9HDB9 667 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 XPNPEP1Q9NQW7 623 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 PADI3Q9ULW8 664 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 PCDHA11Q9Y5I1 949 aa11.86□□□□□ -0.51
PFDN5-201ENST00000243040 MYH11P35749 1972 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 COL4A4P53420 1690 aaPredicted RBP11.85□□□□□ -0.51
PFDN5-201ENST00000243040 RPS6KA5O75582 802 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 GJB5O95377 273 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 AMHP03971 560 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 CCT6AP40227 531 aaKnown RBP11.85□□□□□ -0.51
PFDN5-201ENST00000243040 PBX2P40425 430 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 ECM1Q16610 540 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 HYIQ5T013 277 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 ZNF697Q5TEC3 545 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 KRT79Q5XKE5 535 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.85□□□□□ -0.512e-10■■■■■ 40.7
PFDN5-201ENST00000243040 KCTD17Q8N5Z5 321 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 PIGOQ8TEQ8 1089 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 PSPC1Q8WXF1 523 aaKnown RBP11.85□□□□□ -0.51
PFDN5-201ENST00000243040 LINC01599Q8WXQ3 324 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 TIFAQ96CG3 184 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 AK8Q96MA6 479 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 CCDC43Q96MW1 224 aaKnown RBP11.85□□□□□ -0.51
PFDN5-201ENST00000243040 PPP1R16BQ96T49 567 aa11.85□□□□□ -0.51
PFDN5-201ENST00000243040 MTRQ99707 1265 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms