RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 SEC24CP53992 1094 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 POLE2P56282 527 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 HUNKP57058 714 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 RNASE9P60153 205 aaKnown RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 NFX1Q12986 1120 aaKnown RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 FAM133BQ5BKY9 247 aaKnown RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 UNC13DQ70J99 1090 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 MYCBPAPQ8TBZ2 947 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 KLHL29Q96CT2 875 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 RNPC3Q96LT9 517 aaKnown RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 MED10Q9BTT4 135 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 EHD4Q9H223 541 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 PARVGQ9HBI0 331 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 MTRF1LQ9UGC7 380 aaKnown RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 MON2Q7Z3U7 1717 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 CAMTA1Q9Y6Y1 1673 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 RASSF10A6NK89 507 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 LMNB1P20700 586 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 ZNF543Q08ER8 600 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 MTERF2Q49AM1 385 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 PEX26Q7Z412 305 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 SPDYE1Q8NFV5 336 aaPredicted RBP11.85□□□□□ -0.51
COPA-201ENST00000241704 U2AF1L4Q8WU68 220 aaKnown RBP11.85□□□□□ -0.51
COPA-201ENST00000241704 FAM167BQ9BTA0 163 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 BHMT2Q9H2M3 363 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 CD2APQ9Y5K6 639 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.85□□□□□ -0.51
COPA-201ENST00000241704 PSMD14O00487 310 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 CSPG5O95196 566 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 HMGCS2P54868 508 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 SH3BGRP55822 239 aaPredicted RBP11.85□□□□□ -0.51
COPA-201ENST00000241704 CALCOCO2Q13137 446 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 MUM1Q2TAK8 710 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 PPP1R14CQ8TAE6 165 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 FAM49AQ9H0Q0 323 aaPredicted RBP11.85□□□□□ -0.51
COPA-201ENST00000241704 NYAP2Q9P242 653 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 HESX1Q9UBX0 185 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 GDAQ9Y2T3 454 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 CTNND1O60716 968 aaKnown RBP11.85□□□□□ -0.51
COPA-201ENST00000241704 SHOX2O60902 331 aaPredicted RBP11.85□□□□□ -0.51
COPA-201ENST00000241704 TBX2Q13207 712 aaPredicted RBP11.85□□□□□ -0.51
COPA-201ENST00000241704 DYNC1I2Q13409 638 aaKnown RBP11.85□□□□□ -0.51
COPA-201ENST00000241704 STXBP2Q15833 593 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 KCNV1Q6PIU1 500 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 CROCCP2Q86T23 111 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 TXNDC16Q9P2K2 825 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 RNF14Q9UBS8 474 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 FBXO2Q9UK22 296 aaPredicted RBP11.85□□□□□ -0.51
COPA-201ENST00000241704 PLAAQ9Y263 795 aa11.85□□□□□ -0.51
COPA-201ENST00000241704 CREB3O43889 395 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 CEP104O60308 925 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 RSBN1LQ6PCB5 846 aaPredicted RBP11.84□□□□□ -0.51
COPA-201ENST00000241704 ZNF365Q70YC5 407 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 METTL16Q86W50 562 aaKnown RBP11.84□□□□□ -0.51
COPA-201ENST00000241704 FAM186BQ8IYM0 893 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 NLRP7Q8WX94 980 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 ZBED2Q9BTP6 218 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 TMEM206Q9H813 350 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 ABCB11O95342 1321 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 PVALEFA0A1B0GWK0 134 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 USP11P51784 963 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 MRPS25P82663 173 aaKnown RBP11.84□□□□□ -0.51
COPA-201ENST00000241704 SKOR1P84550 965 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 TRAPPC11Q7Z392 1133 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 RAET1EQ8TD07 263 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 ACCSQ96QU6 501 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 IQCGQ9H095 443 aaKnown RBP11.84□□□□□ -0.51
COPA-201ENST00000241704 SERPINA10Q9UK55 444 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 DIAPH2O60879 1101 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 PSAPP07602 524 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 IFRD2Q12894 506 aaPredicted RBP11.84□□□□□ -0.51
COPA-201ENST00000241704 TCP11X2Q5H9J9 407 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 SH2D4BQ5SQS7 431 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 VCX3BQ9H321 246 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 VCX3AQ9NNX9 186 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 C1orf112Q9NSG2 853 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 BZW2Q9Y6E2 419 aaKnown RBP11.84□□□□□ -0.51
COPA-201ENST00000241704 AP1G2O75843 785 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 AFPP02771 609 aaKnown RBP11.84□□□□□ -0.51
COPA-201ENST00000241704 CASP1P29466 404 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 STAT3P40763 770 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 TROAPQ12815 778 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 SEMA3FQ13275 785 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 PPP4R3CPQ6ZMV5 832 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 LRRC1Q9BTT6 524 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 MXD3Q9BW11 206 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 OSBPL1AQ9BXW6 950 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 POLLQ9UGP5 575 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 FMN2Q9NZ56 1722 aa11.84□□□□□ -0.51
COPA-201ENST00000241704 TLR3O15455 904 aaKnown RBP11.83□□□□□ -0.51
COPA-201ENST00000241704 GAS8O95995 478 aa11.83□□□□□ -0.51
COPA-201ENST00000241704 MYL3P08590 195 aa11.83□□□□□ -0.51
COPA-201ENST00000241704 MARK3P27448 753 aa11.83□□□□□ -0.51
COPA-201ENST00000241704 CTTNQ14247 550 aaKnown RBP11.83□□□□□ -0.51
COPA-201ENST00000241704 KRT31Q15323 416 aa11.83□□□□□ -0.51
COPA-201ENST00000241704 MFSD14CQ5VZR4 134 aa11.83□□□□□ -0.51
COPA-201ENST00000241704 TXNRD3Q86VQ6 643 aa11.83□□□□□ -0.51
COPA-201ENST00000241704 C3orf20Q8ND61 904 aa11.83□□□□□ -0.51
COPA-201ENST00000241704 ARL8AQ96BM9 186 aa11.83□□□□□ -0.51
COPA-201ENST00000241704 ZIM3Q96PE6 472 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms