RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 HOXC9P31274 260 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 DEFA1P59665 94 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 DEFA3P59666 94 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 USP40Q9NVE5 1235 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 NPATQ14207 1427 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 CD58P19256 250 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 TFAMQ00059 246 aaKnown RBP14.78□□□□□ -0.04
TARDBP-201ENST00000240185 INPP5DQ92835 1189 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 APOL6Q9BWW8 343 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 KMT5AQ9NQR1 393 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 TTC7AQ9ULT0 858 aaPredicted RBP14.78□□□□□ -0.04
TARDBP-201ENST00000240185 PCDH11XQ9BZA7 1347 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 PCDH11YQ9BZA8 1340 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 PJA2O43164 708 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 XPOTO43592 962 aaKnown RBP14.78□□□□□ -0.04
TARDBP-201ENST00000240185 MECOMQ03112 1051 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 KDSRQ06136 332 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 NR5A1Q13285 461 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 STX19Q8N4C7 294 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 DNAJC9Q8WXX5 260 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 HSPH1Q92598 858 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 USP44Q9H0E7 712 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 WWP1Q9H0M0 922 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 EPN3Q9H201 632 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 MAGI1Q96QZ7 1491 aaPredicted RBP14.78□□□□□ -0.04
TARDBP-201ENST00000240185 MRPS35P82673 323 aaKnown RBP14.78□□□□□ -0.04
TARDBP-201ENST00000240185 LRRC63Q05C16 580 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 NSUN2Q08J23 767 aaKnown RBP eCLIP14.78□□□□□ -0.04
TARDBP-201ENST00000240185 NFRKBQ6P4R8 1299 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 ZNF473Q8WTR7 871 aaKnown RBP14.78□□□□□ -0.04
TARDBP-201ENST00000240185 RUBCNLQ9H714 662 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 MAP3K19Q56UN5 1328 aa14.78□□□□□ -0.04
TARDBP-201ENST00000240185 EFCAB14O75071 495 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 PAMP19021 973 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 FAM193BQ96PV7 902 aaPredicted RBP14.77□□□□□ -0.04
TARDBP-201ENST00000240185 LRRC4Q9HBW1 653 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 ANAPC7Q9UJX3 599 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 SRPRBQ9Y5M8 271 aaKnown RBP14.77□□□□□ -0.04
TARDBP-201ENST00000240185 PBRM1Q86U86 1689 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 C16orf96A6NNT2 1141 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 SNX2O60749 519 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 RFX1P22670 979 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 HADHAP40939 763 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 PRKG1Q13976 671 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 DMC1Q14565 340 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 FAM47CQ5HY64 1035 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 TRAPPC3LQ5T215 181 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 RBM41Q96IZ5 413 aaKnown RBP14.77□□□□□ -0.04
TARDBP-201ENST00000240185 SLC12A6Q9UHW9 1150 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 CAB39Q9Y376 341 aaPredicted RBP14.77□□□□□ -0.04
TARDBP-201ENST00000240185 ABCC4O15439 1325 aa14.77□□□□□ -0.04
TARDBP-201ENST00000240185 SYNDIG1LA6NDD5 238 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 ZNF233A6NK53 670 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 CYP21A2P08686 494 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 MDH1P40925 334 aaKnown RBP14.77□□□□□ -0.05
TARDBP-201ENST00000240185 FRA10AC1Q70Z53 315 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 ARL8AQ96BM9 186 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 CCT8L2Q96SF2 557 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 DIABLOQ9NR28 239 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 FBXL5Q9UKA1 691 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 TCP11X1B4DZS4 312 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 SEMA3EO15041 775 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 MAFGO15525 162 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 PER1O15534 1290 aaPredicted RBP14.77□□□□□ -0.05
TARDBP-201ENST00000240185 MMP1P03956 469 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 CCND1P24385 295 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 PSMA2P25787 234 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 SLC13A1Q9BZW2 595 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 DLGAP2Q9P1A6 1054 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 SEPT9Q9UHD8 586 aaPredicted RBP14.77□□□□□ -0.05
TARDBP-201ENST00000240185 WDR7Q9Y4E6 1490 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 UGGT2Q9NYU1 1516 aa14.77□□□□□ -0.05
TARDBP-201ENST00000240185 USP27XA6NNY8 438 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 H0YC42 278 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 NBNO60934 754 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 TFDP1Q14186 410 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 CDO1Q16878 200 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 IMPG1Q17R60 797 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 EXOC8Q8IYI6 725 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 OLFML3Q9NRN5 406 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 ZNF18P17022 549 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 CEP78Q5JTW2 689 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 AGGF1Q8N302 714 aaeCLIP14.76□□□□□ -0.05
TARDBP-201ENST00000240185 CABLES1Q8TDN4 633 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 SH3GL1Q99961 368 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 PAGR1Q9BTK6 254 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 GID8Q9NWU2 228 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 HSPA9P38646 679 aaKnown RBP14.76□□□□□ -0.05
TARDBP-201ENST00000240185 IGBP1P78318 339 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 POU5F1BQ06416 359 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 TTC13Q8NBP0 860 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 SLC7A3Q8WY07 619 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 TUBGCP3Q96CW5 907 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 NGRNQ9NPE2 291 aaKnown RBP14.76□□□□□ -0.05
TARDBP-201ENST00000240185 HACD3Q9P035 362 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.76□□□□□ -0.05
TARDBP-201ENST00000240185 HDAC6Q9UBN7 1215 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 NEURL1BA8MQ27 555 aa14.76□□□□□ -0.05
TARDBP-201ENST00000240185 PPARGP37231 505 aaPredicted RBP14.76□□□□□ -0.05
TARDBP-201ENST00000240185 CEBPAP49715 358 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms