RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CENPPQ6IPU0 288 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 GPR153Q6NV75 609 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 STXBP4Q6ZWJ1 553 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 ANKRD33Q7Z3H0 272 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 MIER3Q7Z3K6 550 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 GPBP1Q86WP2 473 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 STAMQ92783 540 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 BADQ92934 168 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 P2RX5Q93086 422 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 OLFML3Q9NRN5 406 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 LIMA1Q9UHB6 759 aaKnown RBP14.62□□□□□ -0.07
SLIRP-201ENST00000238688 COL4A3BPQ9Y5P4 624 aa14.62□□□□□ -0.07
SLIRP-201ENST00000238688 A0A087WWV3 80 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.61□□□□□ -0.07
SLIRP-201ENST00000238688 A0A1B0GTH6 734 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 ASB14A6NK59 587 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 KIAA0355O15063 1070 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 DHX15O43143 795 aaKnown RBP14.61□□□□□ -0.07
SLIRP-201ENST00000238688 SLITRK3O94933 977 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 ASGR1P07306 291 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 C6orf222P0C671 652 aaPredicted RBP14.61□□□□□ -0.07
SLIRP-201ENST00000238688 ARP10275 920 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 CD44P16070 742 aaKnown RBP14.61□□□□□ -0.07
SLIRP-201ENST00000238688 SMPD1P17405 629 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 EIF2AK2P19525 551 aaKnown RBP14.61□□□□□ -0.07
SLIRP-201ENST00000238688 ABCD1P33897 745 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 FAAP100Q0VG06 881 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 ALCAMQ13740 583 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 FAM26FQ5R3K3 315 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 C9orf50Q5SZB4 431 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 FBXO16Q8IX29 292 aaPredicted RBP14.61□□□□□ -0.07
SLIRP-201ENST00000238688 C4orf19Q8IY42 314 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 CCDC112Q8NEF3 446 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 TOX2Q96NM4 488 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 PLIN2Q99541 437 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 TSG101Q99816 390 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 LBHD1Q9BQE6 289 aaPredicted RBP14.61□□□□□ -0.07
SLIRP-201ENST00000238688 XPO4Q9C0E2 1151 aaKnown RBP14.61□□□□□ -0.07
SLIRP-201ENST00000238688 PRDM5Q9NQX1 630 aaPredicted RBP14.61□□□□□ -0.07
SLIRP-201ENST00000238688 STARD7Q9NQZ5 370 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 PANK4Q9NVE7 773 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 IFNKQ9P0W0 207 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 KCNG1Q9UIX4 513 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 CTNND2Q9UQB3 1225 aa14.61□□□□□ -0.07
SLIRP-201ENST00000238688 COL6A3P12111 3177 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 ZNF500O60304 480 aaPredicted RBP14.6□□□□□ -0.07
SLIRP-201ENST00000238688 TBCAO75347 108 aaKnown RBP14.6□□□□□ -0.07
SLIRP-201ENST00000238688 KRT18P05783 430 aaKnown RBP14.6□□□□□ -0.07
SLIRP-201ENST00000238688 CLTBP09497 229 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 EDNRBP24530 442 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 GUCY2CP25092 1073 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 CASP1P29466 404 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 QARSP47897 775 aaKnown RBP14.6□□□□□ -0.07
SLIRP-201ENST00000238688 KCNJ6P48051 423 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 ALDH5A1P51649 535 aaPredicted RBP14.6□□□□□ -0.07
SLIRP-201ENST00000238688 EPHB4P54760 987 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 BEX3Q00994 111 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 TNFAIP2Q03169 654 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 COASYQ13057 564 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 TRIM14Q14142 442 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 SHHQ15465 462 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 ECM1Q16610 540 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 KLHL10Q6JEL2 608 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 TTI2Q6NXR4 508 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 POTEGQ6S5H5 508 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 Q7L0L9 218 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 EEPD1Q7L9B9 569 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 KCNK18Q7Z418 384 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 MYOCDQ8IZQ8 938 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 IL31RAQ8NI17 732 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 ATP6V0A1Q93050 837 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 UNC45AQ9H3U1 944 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 ANKEF1Q9NU02 776 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 MAGEC2Q9UBF1 373 aaPredicted RBP14.6□□□□□ -0.07
SLIRP-201ENST00000238688 PRKAG2Q9UGJ0 569 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 PPME1Q9Y570 386 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 ITIH6Q6UXX5 1313 aa14.6□□□□□ -0.07
SLIRP-201ENST00000238688 MYO9BQ13459 2157 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 SPATA31C2B4DYI2 1134 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 E9PMD0 336 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 EML1O00423 815 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 EIF3DO15371 548 aaKnown RBP eCLIP14.59□□□□□ -0.07
SLIRP-201ENST00000238688 PQBP1O60828 265 aaKnown RBP14.59□□□□□ -0.07
SLIRP-201ENST00000238688 GNA14O95837 355 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 MAPTP10636 758 aaKnown RBP14.59□□□□□ -0.07
SLIRP-201ENST00000238688 IDEP14735 1019 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 PSMC5P62195 406 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 STK4Q13043 487 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 BMT2Q1RMZ1 405 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 EDRF1Q3B7T1 1238 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 GNASQ5JWF2 1037 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 VSTM4Q8IW00 320 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 PCSK9Q8NBP7 692 aaKnown RBP14.59□□□□□ -0.07
SLIRP-201ENST00000238688 KIAA0895Q8NCT3 520 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 CEP63Q96MT8 703 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 MED15Q96RN5 788 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 LXNQ9BS40 222 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 TBX21Q9UL17 535 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 GDAQ9Y2T3 454 aa14.59□□□□□ -0.07
SLIRP-201ENST00000238688 SCN10AQ9Y5Y9 1956 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms