RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 MICU3Q86XE3 530 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 VSIG1Q86XK7 387 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 NME8Q8N427 588 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 TRIM47Q96LD4 638 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 KIAA1683Q9H0B3 1180 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 SLITRK6Q9H5Y7 841 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 TBCCD1Q9NVR7 557 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 AMACRQ9UHK6 382 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 ZNF180Q9UJW8 692 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 KCNK3O14649 394 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 T-ENOLP0DO92 83 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 PORP16435 677 aaPredicted RBP14.05□□□□□ -0.16
MSH2-201ENST00000233146 EMP3P54852 163 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 MTTPP55157 894 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 DENND2CQ68D51 928 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 TAOK1Q7L7X3 1001 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 KBTBD2Q8IY47 623 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 CKAP2Q8WWK9 683 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 TAF4BQ92750 862 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 OSBP2Q969R2 916 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 AP1M1Q9BXS5 423 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 CABP5Q9NP86 173 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 PFDN4Q9NQP4 134 aa14.05□□□□□ -0.16
MSH2-201ENST00000233146 WDR46O15213 610 aaKnown RBP14.04□□□□□ -0.16
MSH2-201ENST00000233146 ZBTB43O43298 467 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 PMS2P54278 862 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 MKRN3Q13064 507 aaKnown RBP14.04□□□□□ -0.16
MSH2-201ENST00000233146 SH3D19Q5HYK7 790 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 BTNL9Q6UXG8 535 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 PPFIBP2Q8ND30 876 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 DEPTORQ8TB45 409 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 RBM46Q8TBY0 533 aaKnown RBP14.04□□□□□ -0.16
MSH2-201ENST00000233146 STMN4Q9H169 189 aaPredicted RBP14.04□□□□□ -0.16
MSH2-201ENST00000233146 KRT82Q9NSB4 513 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 IGSF1Q8N6C5 1336 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 SSU72P8A0A1W2PR75 194 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 TRIM75PA6NK02 468 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 SMIM23A6NLE4 172 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 EPHB6O15197 1021 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 P4HA2O15460 535 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 TTI1O43156 1089 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 MAP3K7O43318 606 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 CFAP157Q5JU67 520 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 INTS8Q75QN2 995 aaKnown RBP14.04□□□□□ -0.16
MSH2-201ENST00000233146 MYOCDQ8IZQ8 938 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 MAML3Q96JK9 1138 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 DUSP9Q99956 384 aaKnown RBP14.04□□□□□ -0.16
MSH2-201ENST00000233146 PTTG2Q9NZH5 202 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 CNOT7Q9UIV1 285 aaKnown RBP14.04□□□□□ -0.16
MSH2-201ENST00000233146 CROTQ9UKG9 612 aa14.04□□□□□ -0.16
MSH2-201ENST00000233146 MARK3P27448 753 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 GEMIN4P57678 1058 aaKnown RBP14.03□□□□□ -0.16
MSH2-201ENST00000233146 KCNMA1Q12791 1236 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 MAP7D1Q3KQU3 841 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 PHLDB3Q6NSJ2 640 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 NANOGNBQ7Z5D8 188 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 SAPCD2Q86UD0 394 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 NELFCDQ8IXH7 590 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 OXER1Q8TDS5 423 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 CTNNBL1Q8WYA6 563 aaPredicted RBP14.03□□□□□ -0.16
MSH2-201ENST00000233146 EYA1Q99502 592 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 METTL5Q9NRN9 209 aaKnown RBP14.03□□□□□ -0.16
MSH2-201ENST00000233146 TUBA8Q9NY65 449 aaPredicted RBP14.03□□□□□ -0.16
MSH2-201ENST00000233146 MAGEB3O15480 346 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 TBX10O75333 385 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 KLRC1P26715 233 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 TXKP42681 527 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 RPS6KA1Q15418 735 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 KCTD19Q17RG1 926 aaPredicted RBP14.03□□□□□ -0.16
MSH2-201ENST00000233146 ZCWPW2Q504Y3 356 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 ZNF362Q5T0B9 420 aaPredicted RBP14.03□□□□□ -0.16
MSH2-201ENST00000233146 CYB5R4Q7L1T6 521 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 PALB2Q86YC2 1186 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 NKX2-3Q8TAU0 364 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 ERP27Q96DN0 273 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 SIK3Q9Y2K2 1263 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 UTP11Q9Y3A2 253 aaKnown RBP14.03□□□□□ -0.16
MSH2-201ENST00000233146 ALKQ9UM73 1620 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 LRRC53A6NM62 1247 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 GOLGA8AA7E2F4 631 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 BOLA2-SMG1P6H3BVE0 249 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 WASLO00401 505 aaPredicted RBP14.03□□□□□ -0.16
MSH2-201ENST00000233146 CAPN9O14815 690 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 PYGMP11217 842 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 RFX5P48382 616 aaPredicted RBP14.03□□□□□ -0.16
MSH2-201ENST00000233146 RASSF2P50749 326 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 MTFR1Q15390 333 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 HS2ST1Q7LGA3 356 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 GRAMD1AQ96CP6 724 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 NOC4LQ9BVI4 516 aaKnown RBP14.03□□□□□ -0.16
MSH2-201ENST00000233146 EPB41L1Q9H4G0 881 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 METTL14Q9HCE5 456 aaKnown RBP14.03□□□□□ -0.16
MSH2-201ENST00000233146 ZDHHC18Q9NUE0 388 aa14.03□□□□□ -0.16
MSH2-201ENST00000233146 FMN2Q9NZ56 1722 aa14.02□□□□□ -0.16
MSH2-201ENST00000233146 SMIM31A0A1B0GVY4 71 aa14.02□□□□□ -0.16
MSH2-201ENST00000233146 PGRMC1O00264 195 aaKnown RBP14.02□□□□□ -0.16
MSH2-201ENST00000233146 LSM1O15116 133 aaKnown RBP14.02□□□□□ -0.16
MSH2-201ENST00000233146 ZBTB48P10074 688 aaPredicted RBP14.02□□□□□ -0.16
MSH2-201ENST00000233146 CDK4P11802 303 aa14.02□□□□□ -0.16
MSH2-201ENST00000233146 GALK1P51570 392 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms