RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 STK36Q9NRP7 1315 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 GYG2O15488 501 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 HSPA4LO95757 839 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 SSTR3P32745 418 aaPredicted RBP14.34□□□□□ -0.11
NEK4-201ENST00000233027 SMAD1Q15797 465 aaKnown RBP14.34□□□□□ -0.11
NEK4-201ENST00000233027 HABP4Q5JVS0 413 aaKnown RBP14.34□□□□□ -0.11
NEK4-201ENST00000233027 PDXDC2PQ6P474 469 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 RPF1Q9H9Y2 349 aaKnown RBP14.34□□□□□ -0.11
NEK4-201ENST00000233027 ZFP69BQ9UJL9 534 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 DIS3Q9Y2L1 958 aaKnown RBP14.34□□□□□ -0.11
NEK4-201ENST00000233027 SYNGAP1Q96PV0 1343 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 COPEO14579 308 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 PPFIA2O75334 1257 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 TXNRD1Q16881 649 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 ENAHQ8N8S7 591 aaPredicted RBP14.34□□□□□ -0.11
NEK4-201ENST00000233027 DPF2Q92785 391 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 DYDC2Q96IM9 177 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 NUDCD1Q96RS6 583 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 EFHD1Q9BUP0 239 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 TTC26A0AVF1 554 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 POTEB3A0JP26 581 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 POTECB2RU33 542 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 USP17L15C9J2P7 530 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 USP17L13C9JLJ4 530 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 USP17L11C9JVI0 530 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 USP17L18D6R9N7 530 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 USP17L22D6RA61 530 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 USP17L17D6RBQ6 530 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 USP17L19D6RCP7 530 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 USP17L20D6RJB6 530 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 STAT3P40763 770 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 USP14P54578 494 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 USP17L24Q0WX57 530 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 PPP6R3Q5H9R7 873 aaPredicted RBP14.34□□□□□ -0.11
NEK4-201ENST00000233027 ZNF746Q6NUN9 644 aaPredicted RBP14.34□□□□□ -0.11
NEK4-201ENST00000233027 USP17L6PQ6QN14 398 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 POTEBQ6S5H4 581 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 METTL23Q86XA0 190 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 SIX6OS1Q8N1H7 587 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 BRIP1Q9BX63 1249 aa14.34□□□□□ -0.11
NEK4-201ENST00000233027 ZNF233A6NK53 670 aa14.33□□□□□ -0.11
NEK4-201ENST00000233027 PPP2R2AP63151 447 aa14.33□□□□□ -0.11
NEK4-201ENST00000233027 CC2D2BQ6DHV5 1058 aa14.33□□□□□ -0.11
NEK4-201ENST00000233027 PPP1R2P3Q6NXS1 205 aa14.33□□□□□ -0.11
NEK4-201ENST00000233027 MMS22LQ6ZRQ5 1243 aa14.33□□□□□ -0.11
NEK4-201ENST00000233027 CDC26Q8NHZ8 85 aa14.33□□□□□ -0.11
NEK4-201ENST00000233027 TTI1O43156 1089 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 NLRP14Q86W24 1093 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 SLC44A5Q8NCS7 719 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 WDR24Q96S15 920 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 NUP85Q9BW27 656 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 BSDC1Q9NW68 430 aaPredicted RBP14.33□□□□□ -0.12
NEK4-201ENST00000233027 SHROOM2Q13796 1616 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 GPC5P78333 572 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 MYO1EQ12965 1108 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 TMEM47Q9BQJ4 181 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 ECT2Q9H8V3 914 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 ADAM22Q9P0K1 906 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 RPAP1Q9BWH6 1393 aaPredicted RBP14.33□□□□□ -0.12
NEK4-201ENST00000233027 ERVV-1B6SEH8 477 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 ZNF185O15231 689 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 SPAG7O75391 227 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 KIF19Q2TAC6 998 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 ZBTB41Q5SVQ8 909 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 NGRNQ9NPE2 291 aaKnown RBP14.33□□□□□ -0.12
NEK4-201ENST00000233027 SLC4A7Q9Y6M7 1214 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 SCINQ9Y6U3 715 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 ERBB3P21860 1342 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 MBD5Q9P267 1494 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 GMNCA6NCL1 334 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 PRDX5P30044 214 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 TMEM259Q4ZIN3 620 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 RNF25Q96BH1 459 aaPredicted RBP14.33□□□□□ -0.12
NEK4-201ENST00000233027 RMDN2Q96LZ7 410 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 SERPINI1Q99574 410 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 TRIM55Q9BYV6 548 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 DRC3Q9H069 523 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 DCTN4Q9UJW0 460 aa14.33□□□□□ -0.12
NEK4-201ENST00000233027 ABCB11O95342 1321 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 YWHAHQ04917 246 aaPredicted RBP14.32□□□□□ -0.12
NEK4-201ENST00000233027 PLEKHG1Q9ULL1 1385 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 FCER1AP12319 257 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 BBS5Q8N3I7 341 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 DHX36Q9H2U1 1008 aaKnown RBP14.32□□□□□ -0.12
NEK4-201ENST00000233027 WDR64B1ANS9 1081 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 K7ERI5 159 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 OCRLQ01968 901 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 RGS9BPQ6ZS82 235 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 SLC24A3Q9HC58 644 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 ANO9A1A5B4 782 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 ARL4CP56559 192 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 FAM83BQ5T0W9 1011 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 THNSL1Q8IYQ7 743 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 ST13P4Q8IZP2 240 aaPredicted RBP14.32□□□□□ -0.12
NEK4-201ENST00000233027 FAM167BQ9BTA0 163 aa14.32□□□□□ -0.12
NEK4-201ENST00000233027 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.32□□□□□ -0.12
NEK4-201ENST00000233027 RWDD4Q6NW29 188 aaKnown RBP14.32□□□□□ -0.12
NEK4-201ENST00000233027 RFX8Q6ZV50 586 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms