RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 PTCH1Q13635 1447 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 PPP6R3Q5H9R7 873 aaPredicted RBP12.37□□□□□ -0.43
LAMA4-201ENST00000230538 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
LAMA4-201ENST00000230538 TMEM179Q6ZVK1 233 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 CYB5R4Q7L1T6 521 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 FOXP4Q8IVH2 680 aaPredicted RBP12.37□□□□□ -0.43
LAMA4-201ENST00000230538 SH3RF3Q8TEJ3 882 aaPredicted RBP12.37□□□□□ -0.43
LAMA4-201ENST00000230538 GANCQ8TET4 914 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 TTC17Q96AE7 1141 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 VPS39Q96JC1 886 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 ZBTB18Q99592 522 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 PRDM15P57071 1507 aaPredicted RBP12.37□□□□□ -0.43
LAMA4-201ENST00000230538 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 MCAMP43121 646 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 ARL4CP56559 192 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 HABP4Q5JVS0 413 aaKnown RBP12.37□□□□□ -0.43
LAMA4-201ENST00000230538 NUGGCQ68CJ6 796 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 THEM5Q8N1Q8 247 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 PRPF38AQ8NAV1 312 aaKnown RBP12.37□□□□□ -0.43
LAMA4-201ENST00000230538 BANK1Q8NDB2 785 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 MORC4Q8TE76 937 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 EXOC4Q96A65 974 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 COA1Q9GZY4 146 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 CEP72Q9P209 647 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 COPEO14579 308 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 DCTN3O75935 186 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 NPR1P16066 1061 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 GUCY2CP25092 1073 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 DRP2Q13474 957 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 THOC1Q96FV9 657 aaKnown RBP12.37□□□□□ -0.43
LAMA4-201ENST00000230538 CEP19Q96LK0 163 aa12.37□□□□□ -0.43
LAMA4-201ENST00000230538 EIF2AQ9BY44 585 aaKnown RBP12.37□□□□□ -0.43
LAMA4-201ENST00000230538 CCDC188H7C350 402 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 KRT37O76014 449 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 PAPOLAP51003 745 aaKnown RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 SPARCL1Q14515 664 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 GLE1Q53GS7 698 aaKnown RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 SLC27A3Q5K4L6 730 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 KRT39Q6A163 491 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 CATSPER4Q7RTX7 472 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 GSPT2Q8IYD1 628 aaKnown RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 THNSL1Q8IYQ7 743 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 RBM41Q96IZ5 413 aaKnown RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 ADAM22Q9P0K1 906 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 SCHIP1Q9P0W5 487 aaPredicted RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 SYNGAP1Q96PV0 1343 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 TMPRSS15P98073 1019 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 MTMR1Q13613 665 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 ZNF394Q53GI3 561 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 TBC1D10CQ8IV04 446 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 CDK12Q9NYV4 1490 aaPredicted RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 HNRNPCL2B2RXH8 293 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 HNRNPCL1O60812 293 aaKnown RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 PRELPP51888 382 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 CIAPIN1Q6FI81 312 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 EMBQ6PCB8 327 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 SYT2Q8N9I0 419 aaPredicted RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 BRIP1Q9BX63 1249 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 PITPNM3Q9BZ71 974 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 KLHL8Q9P2G9 620 aaPredicted RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 CNOT8Q9UFF9 292 aaKnown RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 NFKBIAP25963 317 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 SUSD4Q5VX71 490 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 PASD1Q8IV76 773 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 SUDS3Q9H7L9 328 aaPredicted RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 TMEM94Q12767 1356 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 PLEKHG1Q9ULL1 1385 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 A0A0G2JND7 137 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 NOP14P78316 857 aaKnown RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 GFPT1Q06210 699 aaPredicted RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 HIBCHQ6NVY1 386 aaPredicted RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 CYTH2Q99418 400 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 ELAC2Q9BQ52 826 aaKnown RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 ABHD10Q9NUJ1 306 aa12.36□□□□□ -0.43
LAMA4-201ENST00000230538 SPATS2LQ9NUQ6 558 aaKnown RBP12.36□□□□□ -0.43
LAMA4-201ENST00000230538 TNFAIP2Q03169 654 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 GRAMD1BQ3KR37 738 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 KRT27Q7Z3Y8 459 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 NCLNQ969V3 563 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 POLR3CQ9BUI4 534 aaPredicted RBP12.35□□□□□ -0.43
LAMA4-201ENST00000230538 FSD1LQ9BXM9 530 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 ASNSD1Q9NWL6 643 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 SUN2Q9UH99 717 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
LAMA4-201ENST00000230538 USP17L5A8MUK1 530 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 H3BRJ5 948 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 SNX2O60749 519 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 CYP2D6P10635 497 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 ZBTB17Q13105 803 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 DALRD3Q5D0E6 543 aaKnown RBP12.35□□□□□ -0.43
LAMA4-201ENST00000230538 TRIM59Q8IWR1 403 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 PNMA3Q9UL41 463 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 TADA3O75528 432 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 GH2P01242 217 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 MMEP08473 750 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 IFT43Q96FT9 208 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 LCMT1Q9UIC8 334 aa12.35□□□□□ -0.43
LAMA4-201ENST00000230538 CLDN3O15551 220 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms