RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 LRRC55Q6ZSA7 311 aa22.5■■□□□ 1.19
SNX3-201ENST00000230085 DCAF4Q8WV16 495 aa22.5■■□□□ 1.19
SNX3-201ENST00000230085 ARL8AQ96BM9 186 aa22.5■■□□□ 1.19
SNX3-201ENST00000230085 MMTAG2Q9BU76 263 aaKnown RBP22.5■■□□□ 1.19
SNX3-201ENST00000230085 FBXO28Q9NVF7 368 aa22.5■■□□□ 1.19
SNX3-201ENST00000230085 SLC45A1Q9Y2W3 748 aa22.5■■□□□ 1.19
SNX3-201ENST00000230085 MEFVO15553 781 aaPredicted RBP22.5■■□□□ 1.19
SNX3-201ENST00000230085 FXR2P51116 673 aaKnown RBP eCLIP22.5■■□□□ 1.19
SNX3-201ENST00000230085 PABPC4Q13310 644 aaKnown RBP eCLIP22.5■■□□□ 1.19
SNX3-201ENST00000230085 SLC35G1Q2M3R5 365 aa22.5■■□□□ 1.19
SNX3-201ENST00000230085 SAMD1Q6SPF0 538 aaPredicted RBP22.5■■□□□ 1.19
SNX3-201ENST00000230085 GPKOWQ92917 476 aaPredicted RBP eCLIP22.5■■□□□ 1.19
SNX3-201ENST00000230085 RBM12Q9NTZ6 932 aaKnown RBP22.5■■□□□ 1.19
SNX3-201ENST00000230085 CEP72Q9P209 647 aa22.5■■□□□ 1.19
SNX3-201ENST00000230085 hCG_1984214I3L0E3 225 aa22.49■■□□□ 1.19
SNX3-201ENST00000230085 TRPA1O75762 1119 aa22.49■■□□□ 1.19
SNX3-201ENST00000230085 FLOT1O75955 427 aa22.49■■□□□ 1.19
SNX3-201ENST00000230085 MARSP56192 900 aaKnown RBP22.49■■□□□ 1.19
SNX3-201ENST00000230085 MAP2K1Q02750 393 aaPredicted RBP22.49■■□□□ 1.19
SNX3-201ENST00000230085 NONOQ15233 471 aaKnown RBP eCLIP22.49■■□□□ 1.19
SNX3-201ENST00000230085 TAF1CQ15572 869 aaPredicted RBP22.49■■□□□ 1.19
SNX3-201ENST00000230085 TTBK2Q6IQ55 1244 aa22.49■■□□□ 1.19
SNX3-201ENST00000230085 ZNF713Q8N859 430 aaPredicted RBP22.49■■□□□ 1.19
SNX3-201ENST00000230085 SMCR8Q8TEV9 937 aaPredicted RBP22.49■■□□□ 1.19
SNX3-201ENST00000230085 CALML4Q96GE6 196 aa22.49■■□□□ 1.19
SNX3-201ENST00000230085 P2RX7Q99572 595 aaKnown RBP22.49■■□□□ 1.19
SNX3-201ENST00000230085 GPCPD1Q9NPB8 672 aa22.49■■□□□ 1.19
SNX3-201ENST00000230085 RNF186Q9NXI6 227 aa22.49■■□□□ 1.19
SNX3-201ENST00000230085 TMEM59LQ9UK28 342 aa22.49■■□□□ 1.19
SNX3-201ENST00000230085 LRRC53A6NM62 1247 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 EPHB6O15197 1021 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 FCER1AP12319 257 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 OSBPP22059 807 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 HSPA9P38646 679 aaKnown RBP22.48■■□□□ 1.19
SNX3-201ENST00000230085 ZNF543Q08ER8 600 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 NAB2Q15742 525 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 CFAP58Q5T655 872 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 PPP4R3AQ6IN85 833 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 STAG2Q8N3U4 1231 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 RASGRP4Q8TDF6 673 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 MTMR8Q96EF0 704 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 INPP4AQ96PE3 977 aaPredicted RBP22.48■■□□□ 1.19
SNX3-201ENST00000230085 NDUFAB1O14561 156 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 CYTH3O43739 400 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 ALDH1A1P00352 501 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 SERPING1P05155 500 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 GNA11P29992 359 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 HNRNPH1P31943 449 aaKnown RBP22.48■■□□□ 1.19
SNX3-201ENST00000230085 COG2Q14746 738 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 SV2BQ7L1I2 683 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 CCDC91Q7Z6B0 441 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 NEK8Q86SG6 692 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 SALL4Q9UJQ4 1053 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 PNMA3Q9UL41 463 aa22.48■■□□□ 1.19
SNX3-201ENST00000230085 RLFQ13129 1914 aa22.47■■□□□ 1.19
SNX3-201ENST00000230085 ZNF233A6NK53 670 aa22.47■■□□□ 1.19
SNX3-201ENST00000230085 LSP1P33241 339 aa22.47■■□□□ 1.19
SNX3-201ENST00000230085 SLC16A2P36021 539 aa22.47■■□□□ 1.19
SNX3-201ENST00000230085 STAT2P52630 851 aa22.47■■□□□ 1.19
SNX3-201ENST00000230085 CRHR2Q13324 411 aa22.47■■□□□ 1.19
SNX3-201ENST00000230085 CDC37Q16543 378 aaPredicted RBP22.47■■□□□ 1.19
SNX3-201ENST00000230085 PIK3R5Q8WYR1 880 aa22.47■■□□□ 1.19
SNX3-201ENST00000230085 CPVLQ9H3G5 476 aa22.47■■□□□ 1.19
SNX3-201ENST00000230085 R3HDMLQ9H3Y0 253 aa22.47■■□□□ 1.19
SNX3-201ENST00000230085 BLOC1S4Q9NUP1 217 aa22.47■■□□□ 1.19
SNX3-201ENST00000230085 SLC26A4O43511 780 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 CA12O43570 354 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 PPP1R37O75864 691 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 NAP1L1P55209 391 aaKnown RBP22.46■■□□□ 1.19
SNX3-201ENST00000230085 IKQ13123 557 aaPredicted RBP22.46■■□□□ 1.19
SNX3-201ENST00000230085 PDIA5Q14554 519 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 SLC9C1Q4G0N8 1177 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 ZCWPW2Q504Y3 356 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 C10orf76Q5T2E6 689 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 GPATCH4Q5T3I0 446 aaKnown RBP22.46■■□□□ 1.19
SNX3-201ENST00000230085 MEI1Q5TIA1 1274 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 KCNV1Q6PIU1 500 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 POTEEQ6S8J3 1075 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 ARFGAP2Q8N6H7 521 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 ATP6V1G3Q96LB4 118 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 MTMR9Q96QG7 549 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 MYCBPQ99417 103 aaPredicted RBP22.46■■□□□ 1.19
SNX3-201ENST00000230085 PARK7Q99497 189 aaKnown RBP22.46■■□□□ 1.19
SNX3-201ENST00000230085 UBA5Q9GZZ9 404 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 PLCB1Q9NQ66 1216 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 FEM1BQ9UK73 627 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 PARP14Q460N5 1801 aa22.46■■□□□ 1.19
SNX3-201ENST00000230085 SPDYE16A6NNV3 312 aaPredicted RBP22.45■■□□□ 1.19
SNX3-201ENST00000230085 ANKRD65E5RJM6 399 aa22.45■■□□□ 1.19
SNX3-201ENST00000230085 LIG3P49916 1009 aa22.45■■□□□ 1.19
SNX3-201ENST00000230085 ASPRV1Q53RT3 343 aa22.45■■□□□ 1.19
SNX3-201ENST00000230085 RRAGAQ7L523 313 aa22.45■■□□□ 1.19
SNX3-201ENST00000230085 CEP63Q96MT8 703 aa22.45■■□□□ 1.19
SNX3-201ENST00000230085 C6orf50Q9HD87 102 aa22.45■■□□□ 1.19
SNX3-201ENST00000230085 WBP1LQ9NX94 342 aa22.45■■□□□ 1.19
SNX3-201ENST00000230085 HOXC10Q9NYD6 342 aa22.45■■□□□ 1.19
SNX3-201ENST00000230085 PEX10O60683 326 aa22.45■■□□□ 1.18
SNX3-201ENST00000230085 GLI1P08151 1106 aa22.45■■□□□ 1.18
SNX3-201ENST00000230085 ANXA13P27216 316 aa22.45■■□□□ 1.18
SNX3-201ENST00000230085 DSG3P32926 999 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms