RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 IKZF4Q9H2S9 585 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 hCG_1984214I3L0E3 225 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 PPP1R37O75864 691 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 TTLL1O95922 423 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 KRT18P05783 430 aaKnown RBP10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 EPB41P11171 864 aaKnown RBP10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 NR2F2P24468 414 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 TNFRSF8P28908 595 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 SCNN1DP51172 638 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 IRF2BP2Q7Z5L9 587 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 ZNF713Q8N859 430 aaPredicted RBP10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 MYCBPAPQ8TBZ2 947 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 TBC1D22AQ8WUA7 517 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 LMBR1Q8WVP7 490 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 SYN2Q92777 582 aaPredicted RBP10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 LRRC27Q9C0I9 530 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 CCDC113Q9H0I3 377 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 AJAP1Q9UKB5 411 aaPredicted RBP10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 HOXD13P35453 343 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 EPS15P42566 896 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 MRPL12P52815 198 aaKnown RBP10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 ASIC2Q16515 512 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 GLE1Q53GS7 698 aaKnown RBP10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 DPY19L2P1Q6NXN4 242 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 SLC30A10Q6XR72 485 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 C15orf52Q6ZUT6 534 aaKnown RBP10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 CCDC65Q8IXS2 484 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 CEP63Q96MT8 703 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 AP1M1Q9BXS5 423 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 AIPL1Q9NZN9 384 aa10.24□□□□□ -0.77
HLA-DOA-201ENST00000229829 ZBTB5O15062 677 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 C21orf2O43822 256 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 SHMT1P34896 483 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 KCNA1Q09470 495 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 PABPC4Q13310 644 aaKnown RBP eCLIP10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 CDC37Q16543 378 aaPredicted RBP10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 GJB7Q6PEY0 223 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 FUKQ8N0W3 1084 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 CERS5Q8N5B7 392 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 USP38Q8NB14 1042 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 RBM46Q8TBY0 533 aaKnown RBP10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 RUBCNQ92622 972 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 TSKSQ9UJT2 592 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 HDAC9Q9UKV0 1011 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 RSPH10B2B2RC85 870 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 RSPH10BP0C881 870 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 MARSP56192 900 aaKnown RBP10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 ERVK-9P63128 1117 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 SKOR1P84550 965 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 CATSPER3Q86XQ3 398 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 ZFPM1Q8IX07 1006 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 ZNF483Q8TF39 744 aaPredicted RBP10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 C8orf37Q96NL8 207 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 NUCKS1Q9H1E3 243 aaKnown RBP10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 EPN3Q9H201 632 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 SERPINB13Q9UIV8 391 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 ATF5Q9Y2D1 282 aaPredicted RBP10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 DIAPH2O60879 1101 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 UCHL3P15374 230 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 ATP2B4P23634 1241 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 POLD1P28340 1107 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 RANBP1P43487 201 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 CASP4P49662 377 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 SLC12A3P55017 1021 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 PAK2Q13177 524 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 SPRED3Q2MJR0 410 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 HYIQ5T013 277 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 CACNA2D3Q8IZS8 1091 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 NT5C3AQ9H0P0 336 aa10.23□□□□□ -0.77
HLA-DOA-201ENST00000229829 PHF20L1A8MW92 1017 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 CETN3O15182 167 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 CEP104O60308 925 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 MYBP10242 640 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 SLC8A1P32418 973 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 NFIAQ12857 509 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 QRICH1Q2TAL8 776 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 DCAF17Q5H9S7 520 aaPredicted RBP10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 KSR1Q8IVT5 923 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 NEUROG2Q9H2A3 272 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 DHX36Q9H2U1 1008 aaKnown RBP10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 KCNMB3Q9NPA1 279 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 RNF14Q9UBS8 474 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 SH3BP1Q9Y3L3 701 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 TLDC2A0PJX2 215 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 SFI1A8K8P3 1242 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 KIF3CO14782 793 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 CLIC2O15247 247 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 AKAP3O75969 853 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 ECHS1P30084 290 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 CYP4A11Q02928 519 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 DDR1Q08345 913 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 SEPT2Q15019 361 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 RPS6KA1Q15418 735 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 PTGISQ16647 500 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 PRR16Q569H4 304 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 FOXR2Q6PJQ5 311 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 SFR1Q86XK3 245 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 CYFIP2Q96F07 1278 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 SPAG5Q96R06 1193 aa10.22□□□□□ -0.77
HLA-DOA-201ENST00000229829 DDX47Q9H0S4 455 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms