RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 OLFML3Q9NRN5 406 aa11.79□□□□□ -0.52
CDCA3-201ENST00000229265 ODF2LQ9ULJ1 636 aa11.79□□□□□ -0.52
CDCA3-201ENST00000229265 TRAF3IP3Q9Y228 551 aa11.79□□□□□ -0.52
CDCA3-201ENST00000229265 PCDHA2Q9Y5H9 948 aa11.79□□□□□ -0.52
CDCA3-201ENST00000229265 TEX33O43247 280 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 GAS7O60861 476 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 MED24O75448 989 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 P4HBP07237 508 aaKnown RBP11.78□□□□□ -0.52
CDCA3-201ENST00000229265 IDEP14735 1019 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 SCP2P22307 547 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 RPL13P26373 211 aaKnown RBP11.78□□□□□ -0.52
CDCA3-201ENST00000229265 CNGA1P29973 690 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 SFNP31947 248 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 CCNA1P78396 465 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 RBL2Q08999 1139 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 ALCAMQ13740 583 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 BMT2Q1RMZ1 405 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 HERC4Q5GLZ8 1057 aaPredicted RBP11.78□□□□□ -0.52
CDCA3-201ENST00000229265 CYP26C1Q6V0L0 522 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 DYMQ7RTS9 669 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 MTERF4Q7Z6M4 381 aaKnown RBP11.78□□□□□ -0.52
CDCA3-201ENST00000229265 DPP9Q86TI2 863 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 TMEM139Q8IV31 216 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 KIAA0895Q8NCT3 520 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 CDHR1Q96JP9 859 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 GDF15Q99988 308 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 SENP7Q9BQF6 1050 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 ZNF577Q9BSK1 485 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 SEMA6BQ9H3T3 888 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 SLC39A2Q9NP94 309 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 PDGFCQ9NRA1 345 aa11.78□□□□□ -0.52
CDCA3-201ENST00000229265 CGNQ9P2M7 1197 aaKnown RBP11.78□□□□□ -0.52
CDCA3-201ENST00000229265 DBR1Q9UK59 544 aaKnown RBP11.78□□□□□ -0.52
CDCA3-201ENST00000229265 LUC7L2Q9Y383 392 aaKnown RBP11.78□□□□□ -0.52
CDCA3-201ENST00000229265 E9PMD0 336 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 IPO5O00410 1097 aaKnown RBP11.77□□□□□ -0.53
CDCA3-201ENST00000229265 NFIBO00712 420 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 EIF3DO15371 548 aaKnown RBP eCLIP11.77□□□□□ -0.53
CDCA3-201ENST00000229265 MFAP3LO75121 409 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 FCER1AP12319 257 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 HOXA13P31271 388 aaPredicted RBP11.77□□□□□ -0.53
CDCA3-201ENST00000229265 ABCD1P33897 745 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 ETF1P62495 437 aaKnown RBP11.77□□□□□ -0.53
CDCA3-201ENST00000229265 COASYQ13057 564 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 LRRC41Q15345 812 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 MAN2A1Q16706 1144 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 VWA3BQ502W6 1294 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 ZCWPW2Q504Y3 356 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 ARSHQ5FYA8 562 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 NCAPH2Q6IBW4 605 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 MAMDC4Q6UXC1 1216 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 KCNK18Q7Z418 384 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 NECAB2Q7Z6G3 386 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 NLRX1Q86UT6 975 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 VSIG10LQ86VR7 867 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 GPBP1Q86WP2 473 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 CCDC170Q8IYT3 715 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 CHST13Q8NET6 341 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 IWS1Q96ST2 819 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 NOC4LQ9BVI4 516 aaKnown RBP11.77□□□□□ -0.53
CDCA3-201ENST00000229265 SENP6Q9GZR1 1112 aaPredicted RBP11.77□□□□□ -0.53
CDCA3-201ENST00000229265 VPS16Q9H269 839 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 MROH8Q9H579 483 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 ZSWIM4Q9H7M6 989 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 METTL14Q9HCE5 456 aaKnown RBP11.77□□□□□ -0.53
CDCA3-201ENST00000229265 A1CFQ9NQ94 594 aaKnown RBP11.77□□□□□ -0.53
CDCA3-201ENST00000229265 ZNHIT6Q9NWK9 470 aaKnown RBP11.77□□□□□ -0.53
CDCA3-201ENST00000229265 MYO1AQ9UBC5 1043 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 DAAM1Q9Y4D1 1078 aa11.77□□□□□ -0.53
CDCA3-201ENST00000229265 B4DLN1 442 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 CETN3O15182 167 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 CALUO43852 315 aaPredicted RBP11.76□□□□□ -0.53
CDCA3-201ENST00000229265 ADAMTS4O75173 837 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 KRT18P05783 430 aaKnown RBP11.76□□□□□ -0.53
CDCA3-201ENST00000229265 CCDC175P0C221 793 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 GUCY2CP25092 1073 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 HNRNPH3P31942 346 aaKnown RBP11.76□□□□□ -0.53
CDCA3-201ENST00000229265 COPB2P35606 906 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 MAGEA10P43363 369 aaPredicted RBP11.76□□□□□ -0.53
CDCA3-201ENST00000229265 MTIF2P46199 727 aaKnown RBP11.76□□□□□ -0.53
CDCA3-201ENST00000229265 PMS1P54277 932 aaKnown RBP11.76□□□□□ -0.53
CDCA3-201ENST00000229265 EPHB4P54760 987 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 ZBED6P86452 979 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 MFSD14CQ5VZR4 134 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 CCSAPQ6IQ19 270 aaPredicted RBP11.76□□□□□ -0.53
CDCA3-201ENST00000229265 SLC30A10Q6XR72 485 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 RNF207Q6ZRF8 634 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 C1orf186Q6ZWK4 172 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 EPM2AIP1Q7L775 607 aaPredicted RBP11.76□□□□□ -0.53
CDCA3-201ENST00000229265 FRMD5Q7Z6J6 570 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 ABRAQ8N0Z2 381 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 TXLNBQ8N3L3 684 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 FAM133AQ8N9E0 248 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 GOLGA5Q8TBA6 731 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 SYTL5Q8TDW5 730 aaPredicted RBP11.76□□□□□ -0.53
CDCA3-201ENST00000229265 GPRASP2Q96D09 838 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 TRERF1Q96PN7 1200 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 DNAJC7Q99615 494 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 TINF2Q9BSI4 451 aa11.76□□□□□ -0.53
CDCA3-201ENST00000229265 TEX13BQ9BXU2 312 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms